RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 RAP1GAP2Q684P5 730 aa8.36□□□□□ -1.07
HPS4-201ENST00000336873 OSTM1Q86WC4 334 aa8.36□□□□□ -1.07
HPS4-201ENST00000336873 NAT16Q8N8M0 369 aa8.36□□□□□ -1.07
HPS4-201ENST00000336873 SLC35F5Q8WV83 523 aa8.36□□□□□ -1.07
HPS4-201ENST00000336873 UPF1Q92900 1129 aaKnown RBP eCLIP8.36□□□□□ -1.07
HPS4-201ENST00000336873 MYLPFQ96A32 169 aa8.36□□□□□ -1.07
HPS4-201ENST00000336873 FCRL2Q96LA5 508 aaPredicted RBP8.36□□□□□ -1.07
HPS4-201ENST00000336873 TMEM209Q96SK2 561 aa8.36□□□□□ -1.07
HPS4-201ENST00000336873 FAM96AQ9H5X1 160 aa8.36□□□□□ -1.07
HPS4-201ENST00000336873 CCDC134Q9H6E4 229 aa8.36□□□□□ -1.07
HPS4-201ENST00000336873 SAR1AQ9NR31 198 aa8.36□□□□□ -1.07
HPS4-201ENST00000336873 FAF1Q9UNN5 650 aaPredicted RBP8.36□□□□□ -1.07
HPS4-201ENST00000336873 LRCH1Q9Y2L9 728 aa8.36□□□□□ -1.07
HPS4-201ENST00000336873 PMM2O15305 246 aa8.35□□□□□ -1.07
HPS4-201ENST00000336873 PCNAP12004 261 aa8.35□□□□□ -1.07
HPS4-201ENST00000336873 IL4RP24394 825 aa8.35□□□□□ -1.07
HPS4-201ENST00000336873 PCSK1P29120 753 aa8.35□□□□□ -1.07
HPS4-201ENST00000336873 PPP1R8Q12972 351 aaKnown RBP8.35□□□□□ -1.07
HPS4-201ENST00000336873 MAP7Q14244 749 aa8.35□□□□□ -1.07
HPS4-201ENST00000336873 PSMD5Q16401 504 aa8.35□□□□□ -1.07
HPS4-201ENST00000336873 RBBP7Q16576 425 aa8.35□□□□□ -1.07
HPS4-201ENST00000336873 SLC25A52Q3SY17 297 aa8.35□□□□□ -1.07
HPS4-201ENST00000336873 ZRANB3Q5FWF4 1079 aa8.35□□□□□ -1.07
HPS4-201ENST00000336873 RARS2Q5T160 578 aaKnown RBP8.35□□□□□ -1.07
HPS4-201ENST00000336873 MAP3K21Q5TCX8 1036 aa8.35□□□□□ -1.07
HPS4-201ENST00000336873 GPRIN1Q7Z2K8 1008 aa8.35□□□□□ -1.07
HPS4-201ENST00000336873 ST13P5Q8NFI4 369 aaPredicted RBP8.35□□□□□ -1.07
HPS4-201ENST00000336873 OR9I1Q8NGQ6 314 aa8.35□□□□□ -1.07
HPS4-201ENST00000336873 DNAJB14Q8TBM8 379 aa8.35□□□□□ -1.07
HPS4-201ENST00000336873 EBF2Q9HAK2 575 aa8.35□□□□□ -1.07
HPS4-201ENST00000336873 RRAGCQ9HB90 399 aa8.35□□□□□ -1.07
HPS4-201ENST00000336873 PLK2Q9NYY3 685 aa8.35□□□□□ -1.07
HPS4-201ENST00000336873 PRKAG3Q9UGI9 489 aa8.35□□□□□ -1.07
HPS4-201ENST00000336873 IPO11Q9UI26 975 aaKnown RBP8.35□□□□□ -1.07
HPS4-201ENST00000336873 COX4I1P13073 169 aa8.35□□□□□ -1.07
HPS4-201ENST00000336873 DARSP14868 501 aaKnown RBP8.35□□□□□ -1.07
HPS4-201ENST00000336873 ATP6V1C1P21283 382 aa8.35□□□□□ -1.07
HPS4-201ENST00000336873 PSEN2P49810 448 aa8.35□□□□□ -1.07
HPS4-201ENST00000336873 AQP4P55087 323 aa8.35□□□□□ -1.07
HPS4-201ENST00000336873 CDH17Q12864 832 aa8.35□□□□□ -1.07
HPS4-201ENST00000336873 FSCN1Q16658 493 aaKnown RBP8.35□□□□□ -1.07
HPS4-201ENST00000336873 PARP6Q2NL67 630 aa8.35□□□□□ -1.07
HPS4-201ENST00000336873 BNC2Q6ZN30 1099 aaPredicted RBP8.35□□□□□ -1.07
HPS4-201ENST00000336873 SHCBP1Q8NEM2 672 aa8.35□□□□□ -1.07
HPS4-201ENST00000336873 B4GALNT2Q8NHY0 566 aa8.35□□□□□ -1.07
HPS4-201ENST00000336873 NPLOC4Q8TAT6 608 aa8.35□□□□□ -1.07
HPS4-201ENST00000336873 FNIP1Q8TF40 1166 aa8.35□□□□□ -1.07
HPS4-201ENST00000336873 NCLNQ969V3 563 aa8.35□□□□□ -1.07
HPS4-201ENST00000336873 FCRL3Q96P31 734 aaPredicted RBP8.35□□□□□ -1.07
HPS4-201ENST00000336873 PANX3Q96QZ0 392 aa8.35□□□□□ -1.07
HPS4-201ENST00000336873 CENPKQ9BS16 269 aa8.35□□□□□ -1.07
HPS4-201ENST00000336873 LRFN2Q9ULH4 789 aa8.35□□□□□ -1.07
HPS4-201ENST00000336873 TIMM22Q9Y584 194 aa8.35□□□□□ -1.07
HPS4-201ENST00000336873 MYO10Q9HD67 2058 aa8.35□□□□□ -1.07
HPS4-201ENST00000336873 C10orf71Q711Q0 1435 aa8.35□□□□□ -1.07
HPS4-201ENST00000336873 RRN3P2A6NIE6 340 aa8.35□□□□□ -1.07
HPS4-201ENST00000336873 ATG7O95352 703 aa8.35□□□□□ -1.07
HPS4-201ENST00000336873 PSMC3P17980 439 aa8.35□□□□□ -1.07
HPS4-201ENST00000336873 TFEBP19484 476 aa8.35□□□□□ -1.07
HPS4-201ENST00000336873 OR1E1P30953 314 aa8.35□□□□□ -1.07
HPS4-201ENST00000336873 ABL2P42684 1182 aa8.35□□□□□ -1.07
HPS4-201ENST00000336873 GSSP48637 474 aa8.35□□□□□ -1.07
HPS4-201ENST00000336873 PAPOLAP51003 745 aaKnown RBP8.35□□□□□ -1.07
HPS4-201ENST00000336873 TRMT5Q32P41 509 aaKnown RBP8.35□□□□□ -1.07
HPS4-201ENST00000336873 USP50Q70EL3 339 aaPredicted RBP8.35□□□□□ -1.07
HPS4-201ENST00000336873 FAM35AQ86V20 835 aa8.35□□□□□ -1.07
HPS4-201ENST00000336873 KYQ8NBH2 561 aa8.35□□□□□ -1.07
HPS4-201ENST00000336873 OR6Y1Q8NGX8 325 aa8.35□□□□□ -1.07
HPS4-201ENST00000336873 HDAC10Q969S8 669 aa8.35□□□□□ -1.07
HPS4-201ENST00000336873 C1orf50Q9BV19 199 aa8.35□□□□□ -1.07
HPS4-201ENST00000336873 UPF3AQ9H1J1 476 aaKnown RBP8.35□□□□□ -1.07
HPS4-201ENST00000336873 PPCSQ9HAB8 311 aa8.35□□□□□ -1.07
HPS4-201ENST00000336873 HPS4Q9NQG7 708 aa8.35□□□□□ -1.07
HPS4-201ENST00000336873 LATS2Q9NRM7 1088 aa8.35□□□□□ -1.07
HPS4-201ENST00000336873 WARS2Q9UGM6 360 aaKnown RBP8.35□□□□□ -1.07
HPS4-201ENST00000336873 CIDEBQ9UHD4 219 aa8.35□□□□□ -1.07
HPS4-201ENST00000336873 MAGEA13PA6NCF6 341 aa8.34□□□□□ -1.07
HPS4-201ENST00000336873 ZBTB42B2RXF5 422 aa8.34□□□□□ -1.07
HPS4-201ENST00000336873 PIGRP01833 764 aa8.34□□□□□ -1.07
HPS4-201ENST00000336873 ELNP15502 786 aa8.34□□□□□ -1.07
HPS4-201ENST00000336873 PTPN3P26045 913 aa8.34□□□□□ -1.07
HPS4-201ENST00000336873 WEE1P30291 646 aa8.34□□□□□ -1.07
HPS4-201ENST00000336873 GRM5P41594 1212 aa8.34□□□□□ -1.07
HPS4-201ENST00000336873 NRG1Q02297 640 aaPredicted RBP8.34□□□□□ -1.07
HPS4-201ENST00000336873 ZBTB17Q13105 803 aa8.34□□□□□ -1.07
HPS4-201ENST00000336873 RIPK1Q13546 671 aa8.34□□□□□ -1.07
HPS4-201ENST00000336873 CAPRIN1Q14444 709 aaKnown RBP8.34□□□□□ -1.07
HPS4-201ENST00000336873 C6orf52Q5T4I8 152 aa8.34□□□□□ -1.07
HPS4-201ENST00000336873 NEPROQ6NW34 567 aa8.34□□□□□ -1.07
HPS4-201ENST00000336873 CLEC20AQ6ZU45 233 aa8.34□□□□□ -1.07
HPS4-201ENST00000336873 RAB44Q7Z6P3 723 aaPredicted RBP8.34□□□□□ -1.07
HPS4-201ENST00000336873 ZNF786Q8N393 782 aa8.34□□□□□ -1.07
HPS4-201ENST00000336873 FSTL5Q8N475 847 aaPredicted RBP8.34□□□□□ -1.07
HPS4-201ENST00000336873 TTC39CQ8N584 583 aa8.34□□□□□ -1.07
HPS4-201ENST00000336873 ARRDC4Q8NCT1 418 aa8.34□□□□□ -1.07
HPS4-201ENST00000336873 DUSP16Q9BY84 665 aa8.34□□□□□ -1.07
HPS4-201ENST00000336873 Q9H521 79 aa8.34□□□□□ -1.07
HPS4-201ENST00000336873 NCKIPSDQ9NZQ3 722 aa8.34□□□□□ -1.07
HPS4-201ENST00000336873 A0A1W2PQ67 120 aa8.34□□□□□ -1.07
HPS4-201ENST00000336873 KCNU1A8MYU2 1149 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms