RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 UBE3AQ05086 875 aa12□□□□□ -0.49
HDAC6-201ENST00000334136 SPDYCQ5MJ68 293 aa12□□□□□ -0.49
HDAC6-201ENST00000334136 SDE2Q6IQ49 451 aa12□□□□□ -0.49
HDAC6-201ENST00000334136 TMEM174Q8WUU8 243 aa12□□□□□ -0.49
HDAC6-201ENST00000334136 CASP10Q92851 521 aa12□□□□□ -0.49
HDAC6-201ENST00000334136 ART4Q93070 314 aa12□□□□□ -0.49
HDAC6-201ENST00000334136 CXCL16Q9H2A7 254 aa12□□□□□ -0.49
HDAC6-201ENST00000334136 DYRK4Q9NR20 520 aa12□□□□□ -0.49
HDAC6-201ENST00000334136 MTRRQ9UBK8 725 aa12□□□□□ -0.49
HDAC6-201ENST00000334136 INSL5Q9Y5Q6 135 aa12□□□□□ -0.49
HDAC6-201ENST00000334136 M0QZQ0 153 aa12□□□□□ -0.49
HDAC6-201ENST00000334136 PSMG1O95456 288 aa12□□□□□ -0.49
HDAC6-201ENST00000334136 CFHP08603 1231 aa12□□□□□ -0.49
HDAC6-201ENST00000334136 AMPD1P23109 780 aa12□□□□□ -0.49
HDAC6-201ENST00000334136 TAF5Q15542 800 aa12□□□□□ -0.49
HDAC6-201ENST00000334136 TRMT5Q32P41 509 aaKnown RBP12□□□□□ -0.49
HDAC6-201ENST00000334136 TTC27Q6P3X3 843 aa12□□□□□ -0.49
HDAC6-201ENST00000334136 CSGALNACT1Q8TDX6 532 aa12□□□□□ -0.49
HDAC6-201ENST00000334136 DQX1Q8TE96 717 aaKnown RBP12□□□□□ -0.49
HDAC6-201ENST00000334136 INPP5DQ92835 1189 aa12□□□□□ -0.49
HDAC6-201ENST00000334136 VPS39Q96JC1 886 aa12□□□□□ -0.49
HDAC6-201ENST00000334136 SMOQ99835 787 aa12□□□□□ -0.49
HDAC6-201ENST00000334136 IPO11Q9UI26 975 aaKnown RBP12□□□□□ -0.49
HDAC6-201ENST00000334136 PCDHA11Q9Y5I1 949 aa12□□□□□ -0.49
HDAC6-201ENST00000334136 DPPA5A6NC42 116 aa11.99□□□□□ -0.49
HDAC6-201ENST00000334136 BTNL10A8MVZ5 291 aa11.99□□□□□ -0.49
HDAC6-201ENST00000334136 TMEM189-UBE2V1I3L0A0 370 aa11.99□□□□□ -0.49
HDAC6-201ENST00000334136 MSI1O43347 362 aaKnown RBP11.99□□□□□ -0.49
HDAC6-201ENST00000334136 UNGP13051 313 aaPredicted RBP11.99□□□□□ -0.49
HDAC6-201ENST00000334136 VCPP55072 806 aaKnown RBP11.99□□□□□ -0.49
HDAC6-201ENST00000334136 ARL14EPQ8N8R7 260 aaPredicted RBP11.99□□□□□ -0.49
HDAC6-201ENST00000334136 HERVK_113Q902F9 699 aa11.99□□□□□ -0.49
HDAC6-201ENST00000334136 C8orf48Q96LL4 319 aa11.99□□□□□ -0.49
HDAC6-201ENST00000334136 TASP1Q9H6P5 420 aa11.99□□□□□ -0.49
HDAC6-201ENST00000334136 TAGLN3Q9UI15 199 aa11.99□□□□□ -0.49
HDAC6-201ENST00000334136 PLXNA1Q9UIW2 1896 aa11.99□□□□□ -0.49
HDAC6-201ENST00000334136 H0YGN5 161 aa11.99□□□□□ -0.49
HDAC6-201ENST00000334136 MTSS1O43312 755 aa11.99□□□□□ -0.49
HDAC6-201ENST00000334136 PGM3O95394 542 aa11.99□□□□□ -0.49
HDAC6-201ENST00000334136 ATP6V1C1P21283 382 aa11.99□□□□□ -0.49
HDAC6-201ENST00000334136 GSTT1P30711 240 aa11.99□□□□□ -0.49
HDAC6-201ENST00000334136 PPP3CCP48454 512 aa11.99□□□□□ -0.49
HDAC6-201ENST00000334136 GPR15P49685 360 aa11.99□□□□□ -0.49
HDAC6-201ENST00000334136 DSC1Q08554 894 aa11.99□□□□□ -0.49
HDAC6-201ENST00000334136 BNIP1Q12981 228 aa11.99□□□□□ -0.49
HDAC6-201ENST00000334136 PTK6Q13882 451 aa11.99□□□□□ -0.49
HDAC6-201ENST00000334136 SLC45A4Q5BKX6 768 aa11.99□□□□□ -0.49
HDAC6-201ENST00000334136 RNF43Q68DV7 783 aa11.99□□□□□ -0.49
HDAC6-201ENST00000334136 ARHGAP22Q7Z5H3 698 aa11.99□□□□□ -0.49
HDAC6-201ENST00000334136 RAB44Q7Z6P3 723 aaPredicted RBP11.99□□□□□ -0.49
HDAC6-201ENST00000334136 SLC26A11Q86WA9 606 aa11.99□□□□□ -0.49
HDAC6-201ENST00000334136 PGBD3Q8N328 593 aa11.99□□□□□ -0.49
HDAC6-201ENST00000334136 ANKRD27Q96NW4 1050 aa11.99□□□□□ -0.49
HDAC6-201ENST00000334136 HERC2P3Q9BVR0 1158 aa11.99□□□□□ -0.49
HDAC6-201ENST00000334136 IL1RL2Q9HB29 575 aa11.99□□□□□ -0.49
HDAC6-201ENST00000334136 CLIC5Q9NZA1 410 aa11.99□□□□□ -0.49
HDAC6-201ENST00000334136 PCDH10Q9P2E7 1040 aa11.99□□□□□ -0.49
HDAC6-201ENST00000334136 COG5Q9UP83 839 aa11.99□□□□□ -0.49
HDAC6-201ENST00000334136 STARD13Q9Y3M8 1113 aa11.99□□□□□ -0.49
HDAC6-201ENST00000334136 A0A1W2PRU2 124 aa11.99□□□□□ -0.49
HDAC6-201ENST00000334136 RAMP2O60895 175 aa11.99□□□□□ -0.49
HDAC6-201ENST00000334136 SPAG6O75602 509 aa11.99□□□□□ -0.49
HDAC6-201ENST00000334136 CYP11A1P05108 521 aa11.99□□□□□ -0.49
HDAC6-201ENST00000334136 CNPP09543 421 aaKnown RBP11.99□□□□□ -0.49
HDAC6-201ENST00000334136 MAGEA11P43364 429 aa11.99□□□□□ -0.49
HDAC6-201ENST00000334136 OXCT1P55809 520 aa11.99□□□□□ -0.49
HDAC6-201ENST00000334136 STRADAQ7RTN6 431 aa11.99□□□□□ -0.49
HDAC6-201ENST00000334136 RASGEF1CQ8N431 466 aa11.99□□□□□ -0.49
HDAC6-201ENST00000334136 KBTBD7Q8WVZ9 684 aa11.99□□□□□ -0.49
HDAC6-201ENST00000334136 KCNN1Q92952 543 aa11.99□□□□□ -0.49
HDAC6-201ENST00000334136 RMDN1Q96DB5 314 aa11.99□□□□□ -0.49
HDAC6-201ENST00000334136 CELF6Q96J87 481 aaKnown RBP11.99□□□□□ -0.49
HDAC6-201ENST00000334136 SRPK1Q96SB4 655 aaKnown RBP11.99□□□□□ -0.49
HDAC6-201ENST00000334136 SNRNP25Q9BV90 132 aaKnown RBP11.99□□□□□ -0.49
HDAC6-201ENST00000334136 SLC4A5Q9BY07 1137 aa11.99□□□□□ -0.49
HDAC6-201ENST00000334136 ETAA1Q9NY74 926 aa11.99□□□□□ -0.49
HDAC6-201ENST00000334136 CFAP97Q9P2B7 532 aa11.99□□□□□ -0.49
HDAC6-201ENST00000334136 NCANO14594 1321 aa11.98□□□□□ -0.49
HDAC6-201ENST00000334136 CBX4O00257 560 aa11.98□□□□□ -0.49
HDAC6-201ENST00000334136 PFDN6O15212 129 aa11.98□□□□□ -0.49
HDAC6-201ENST00000334136 KCNA4P22459 653 aa11.98□□□□□ -0.49
HDAC6-201ENST00000334136 KPNA2P52292 529 aaKnown RBP11.98□□□□□ -0.49
HDAC6-201ENST00000334136 ASTE1Q2TB18 679 aaPredicted RBP11.98□□□□□ -0.49
HDAC6-201ENST00000334136 KLC3Q6P597 504 aa11.98□□□□□ -0.49
HDAC6-201ENST00000334136 C16orf59Q7L2K0 433 aa11.98□□□□□ -0.49
HDAC6-201ENST00000334136 SLC35F5Q8WV83 523 aa11.98□□□□□ -0.49
HDAC6-201ENST00000334136 LINC01599Q8WXQ3 324 aa11.98□□□□□ -0.49
HDAC6-201ENST00000334136 CCDC134Q9H6E4 229 aa11.98□□□□□ -0.49
HDAC6-201ENST00000334136 PAIP2BQ9ULR5 123 aaKnown RBP11.98□□□□□ -0.49
HDAC6-201ENST00000334136 LOXHD1Q8IVV2 1947 aa11.98□□□□□ -0.49
HDAC6-201ENST00000334136 DDX3YO15523 660 aaKnown RBP11.98□□□□□ -0.49
HDAC6-201ENST00000334136 PROCP04070 461 aa11.98□□□□□ -0.49
HDAC6-201ENST00000334136 TAC1P20366 129 aa11.98□□□□□ -0.49
HDAC6-201ENST00000334136 RIPK1Q13546 671 aa11.98□□□□□ -0.49
HDAC6-201ENST00000334136 BRMS1LQ5PSV4 323 aa11.98□□□□□ -0.49
HDAC6-201ENST00000334136 OTOAQ7RTW8 1153 aa11.98□□□□□ -0.49
HDAC6-201ENST00000334136 TMEM110Q86TL2 294 aa11.98□□□□□ -0.49
HDAC6-201ENST00000334136 EFCAB3Q8N7B9 438 aa11.98□□□□□ -0.49
HDAC6-201ENST00000334136 CLEC4CQ8WTT0 213 aa11.98□□□□□ -0.49
HDAC6-201ENST00000334136 MPP4Q96JB8 637 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms