RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 RAD54BQ9Y620 910 aa16.82■□□□□ 0.28
SHOX-201ENST00000334060 NCOR1O75376 2440 aa16.82■□□□□ 0.28
SHOX-201ENST00000334060 DMDP11532 3685 aa16.81■□□□□ 0.28
SHOX-201ENST00000334060 ESYT3A0FGR9 886 aa16.81■□□□□ 0.28
SHOX-201ENST00000334060 CCNB1P14635 433 aa16.81■□□□□ 0.28
SHOX-201ENST00000334060 PRKCHP24723 683 aa16.81■□□□□ 0.28
SHOX-201ENST00000334060 TIE1P35590 1138 aa16.81■□□□□ 0.28
SHOX-201ENST00000334060 IL12RB1P42701 662 aa16.81■□□□□ 0.28
SHOX-201ENST00000334060 METAP1P53582 386 aa16.81■□□□□ 0.28
SHOX-201ENST00000334060 NIPAL4Q0D2K0 466 aa16.81■□□□□ 0.28
SHOX-201ENST00000334060 TEX35Q5T0J7 233 aa16.81■□□□□ 0.28
SHOX-201ENST00000334060 CCDC105Q8IYK2 499 aa16.81■□□□□ 0.28
SHOX-201ENST00000334060 AHI1Q8N157 1196 aa16.81■□□□□ 0.28
SHOX-201ENST00000334060 ALLCQ8N6M5 410 aa16.81■□□□□ 0.28
SHOX-201ENST00000334060 SPATA22Q8NHS9 363 aa16.81■□□□□ 0.28
SHOX-201ENST00000334060 SMIM14Q96QK8 99 aa16.81■□□□□ 0.28
SHOX-201ENST00000334060 TRIM31Q9BZY9 425 aa16.81■□□□□ 0.28
SHOX-201ENST00000334060 BRD8Q9H0E9 1235 aa16.81■□□□□ 0.28
SHOX-201ENST00000334060 LHX3Q9UBR4 397 aa16.81■□□□□ 0.28
SHOX-201ENST00000334060 ERVW-1Q9UQF0 538 aa16.81■□□□□ 0.28
SHOX-201ENST00000334060 BPTFQ12830 3046 aa16.8■□□□□ 0.28
SHOX-201ENST00000334060 BCLAF3A2AJT9 711 aaKnown RBP16.8■□□□□ 0.28
SHOX-201ENST00000334060 MATN3O15232 486 aa16.8■□□□□ 0.28
SHOX-201ENST00000334060 KIR2DL1P43626 348 aaPredicted RBP16.8■□□□□ 0.28
SHOX-201ENST00000334060 DSC2Q02487 901 aa16.8■□□□□ 0.28
SHOX-201ENST00000334060 IL10RBQ08334 325 aa16.8■□□□□ 0.28
SHOX-201ENST00000334060 ZNF234Q14588 700 aa16.8■□□□□ 0.28
SHOX-201ENST00000334060 PTPRRQ15256 657 aa16.8■□□□□ 0.28
SHOX-201ENST00000334060 MLF2Q15773 248 aaPredicted RBP16.8■□□□□ 0.28
SHOX-201ENST00000334060 TMEM196Q5HYL7 178 aa16.8■□□□□ 0.28
SHOX-201ENST00000334060 Q6ZVU0 165 aa16.8■□□□□ 0.28
SHOX-201ENST00000334060 CACUL1Q86Y37 369 aa16.8■□□□□ 0.28
SHOX-201ENST00000334060 ZNF687Q8N1G0 1237 aa16.8■□□□□ 0.28
SHOX-201ENST00000334060 MAML1Q92585 1016 aa16.8■□□□□ 0.28
SHOX-201ENST00000334060 DNASE1L2Q92874 299 aa16.8■□□□□ 0.28
SHOX-201ENST00000334060 TTC17Q96AE7 1141 aa16.8■□□□□ 0.28
SHOX-201ENST00000334060 TSGA13Q96PP4 275 aa16.8■□□□□ 0.28
SHOX-201ENST00000334060 SLC2A11Q9BYW1 496 aa16.8■□□□□ 0.28
SHOX-201ENST00000334060 TRPV5Q9NQA5 729 aa16.8■□□□□ 0.28
SHOX-201ENST00000334060 ARHGEF3Q9NR81 526 aa16.8■□□□□ 0.28
SHOX-201ENST00000334060 RBM22Q9NW64 420 aaKnown RBP eCLIP16.8■□□□□ 0.28
SHOX-201ENST00000334060 DMGDHQ9UI17 866 aaKnown RBP16.8■□□□□ 0.28
SHOX-201ENST00000334060 PPP1R12AO14974 1030 aaPredicted RBP16.8■□□□□ 0.28
SHOX-201ENST00000334060 HNRNPLP14866 589 aaKnown RBP eCLIP16.8■□□□□ 0.28
SHOX-201ENST00000334060 POLR2EP19388 210 aaKnown RBP16.8■□□□□ 0.28
SHOX-201ENST00000334060 CCNCP24863 283 aa16.8■□□□□ 0.28
SHOX-201ENST00000334060 TARSP26639 723 aaKnown RBP16.8■□□□□ 0.28
SHOX-201ENST00000334060 RPL22P35268 128 aaKnown RBP16.8■□□□□ 0.28
SHOX-201ENST00000334060 SERPINH1P50454 418 aaKnown RBP16.8■□□□□ 0.28
SHOX-201ENST00000334060 ECT2LQ008S8 904 aa16.8■□□□□ 0.28
SHOX-201ENST00000334060 LBRQ14739 615 aaKnown RBP16.8■□□□□ 0.28
SHOX-201ENST00000334060 HEATR6Q6AI08 1181 aaKnown RBP16.8■□□□□ 0.28
SHOX-201ENST00000334060 ATP11CQ8NB49 1132 aa16.8■□□□□ 0.28
SHOX-201ENST00000334060 TTC13Q8NBP0 860 aa16.8■□□□□ 0.28
SHOX-201ENST00000334060 CHST14Q8NCH0 376 aa16.8■□□□□ 0.28
SHOX-201ENST00000334060 FAM3CQ92520 227 aa16.8■□□□□ 0.28
SHOX-201ENST00000334060 UBA2Q9UBT2 640 aaPredicted RBP16.8■□□□□ 0.28
SHOX-201ENST00000334060 TCRBV7S3A2A0A539 114 aa16.79■□□□□ 0.28
SHOX-201ENST00000334060 CTAGE15A4D2H0 777 aa16.79■□□□□ 0.28
SHOX-201ENST00000334060 MT-CYBP00156 380 aaPredicted RBP16.79■□□□□ 0.28
SHOX-201ENST00000334060 ITGAVP06756 1048 aa16.79■□□□□ 0.28
SHOX-201ENST00000334060 CTAGE8P0CG41 777 aa16.79■□□□□ 0.28
SHOX-201ENST00000334060 NFKB1P19838 968 aa16.79■□□□□ 0.28
SHOX-201ENST00000334060 MX2P20592 715 aa16.79■□□□□ 0.28
SHOX-201ENST00000334060 PSMB4P28070 264 aa16.79■□□□□ 0.28
SHOX-201ENST00000334060 XRCC4Q13426 336 aa16.79■□□□□ 0.28
SHOX-201ENST00000334060 FZD5Q13467 585 aa16.79■□□□□ 0.28
SHOX-201ENST00000334060 GAS6Q14393 721 aa16.79■□□□□ 0.28
SHOX-201ENST00000334060 ANKRD20A2Q5SQ80 823 aa16.79■□□□□ 0.28
SHOX-201ENST00000334060 ANKRD20A1Q5TYW2 823 aa16.79■□□□□ 0.28
SHOX-201ENST00000334060 ANKRD20A3Q5VUR7 823 aa16.79■□□□□ 0.28
SHOX-201ENST00000334060 DRICH1Q6PGQ1 229 aaPredicted RBP16.79■□□□□ 0.28
SHOX-201ENST00000334060 MICALCLQ6ZW33 695 aa16.79■□□□□ 0.28
SHOX-201ENST00000334060 CTAGE6Q86UF2 777 aa16.79■□□□□ 0.28
SHOX-201ENST00000334060 JAMLQ86YT9 394 aa16.79■□□□□ 0.28
SHOX-201ENST00000334060 CCDC117Q8IWD4 279 aaPredicted RBP16.79■□□□□ 0.28
SHOX-201ENST00000334060 CTAGE4Q8IX94 777 aa16.79■□□□□ 0.28
SHOX-201ENST00000334060 SH2D3CQ8N5H7 860 aa16.79■□□□□ 0.28
SHOX-201ENST00000334060 FRS2Q8WU20 508 aa16.79■□□□□ 0.28
SHOX-201ENST00000334060 NAP1L3Q99457 506 aaPredicted RBP16.79■□□□□ 0.28
SHOX-201ENST00000334060 IL12RB2Q99665 862 aa16.79■□□□□ 0.28
SHOX-201ENST00000334060 C2orf49Q9BVC5 232 aaPredicted RBP16.79■□□□□ 0.28
SHOX-201ENST00000334060 SLC6A17Q9H1V8 727 aa16.79■□□□□ 0.28
SHOX-201ENST00000334060 PIH1D1Q9NWS0 290 aaKnown RBP16.79■□□□□ 0.28
SHOX-201ENST00000334060 RNF14Q9UBS8 474 aa16.79■□□□□ 0.28
SHOX-201ENST00000334060 A0A0U1RQS6 177 aa16.78■□□□□ 0.28
SHOX-201ENST00000334060 SLU7O95391 586 aaKnown RBP16.78■□□□□ 0.28
SHOX-201ENST00000334060 DLDP09622 509 aaKnown RBP16.78■□□□□ 0.28
SHOX-201ENST00000334060 RHOXF2BP0C7M4 288 aa16.78■□□□□ 0.28
SHOX-201ENST00000334060 GRIA2P42262 883 aa16.78■□□□□ 0.28
SHOX-201ENST00000334060 SPARCL1Q14515 664 aa16.78■□□□□ 0.28
SHOX-201ENST00000334060 DLG2Q15700 870 aa16.78■□□□□ 0.28
SHOX-201ENST00000334060 POM121L1PQ3SYA9 428 aa16.78■□□□□ 0.28
SHOX-201ENST00000334060 ACCSLQ4AC99 568 aa16.78■□□□□ 0.28
SHOX-201ENST00000334060 KIAA1211LQ6NV74 962 aa16.78■□□□□ 0.28
SHOX-201ENST00000334060 ZNF783Q6ZMS7 281 aa16.78■□□□□ 0.28
SHOX-201ENST00000334060 GSTA5Q7RTV2 222 aa16.78■□□□□ 0.28
SHOX-201ENST00000334060 KDELC2Q7Z4H8 507 aa16.78■□□□□ 0.28
SHOX-201ENST00000334060 RALGPS2Q86X27 583 aaPredicted RBP16.78■□□□□ 0.28
SHOX-201ENST00000334060 CDKL3Q8IVW4 592 aaPredicted RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms