RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 KCTD11Q693B1 232 aa23.69■■□□□ 1.38
TSEN54-201ENST00000333213 MFN1Q8IWA4 741 aa23.69■■□□□ 1.38
TSEN54-201ENST00000333213 SPATA22Q8NHS9 363 aa23.69■■□□□ 1.38
TSEN54-201ENST00000333213 UBLCP1Q8WVY7 318 aaPredicted RBP23.69■■□□□ 1.38
TSEN54-201ENST00000333213 PABPC3Q9H361 631 aaKnown RBP23.69■■□□□ 1.38
TSEN54-201ENST00000333213 UBP1Q9NZI7 540 aa23.69■■□□□ 1.38
TSEN54-201ENST00000333213 TTLL3Q9Y4R7 772 aa23.69■■□□□ 1.38
TSEN54-201ENST00000333213 A0A1W2PPC1 479 aa23.68■■□□□ 1.38
TSEN54-201ENST00000333213 E7ESA3 106 aa23.68■■□□□ 1.38
TSEN54-201ENST00000333213 E7EVH7 732 aa23.68■■□□□ 1.38
TSEN54-201ENST00000333213 SOX1O00570 391 aaPredicted RBP23.68■■□□□ 1.38
TSEN54-201ENST00000333213 CD160O95971 181 aa23.68■■□□□ 1.38
TSEN54-201ENST00000333213 CSKP41240 450 aa23.68■■□□□ 1.38
TSEN54-201ENST00000333213 RENBPP51606 427 aa23.68■■□□□ 1.38
TSEN54-201ENST00000333213 ARF5P84085 180 aa23.68■■□□□ 1.38
TSEN54-201ENST00000333213 IHHQ14623 411 aa23.68■■□□□ 1.38
TSEN54-201ENST00000333213 MCUQ8NE86 351 aa23.68■■□□□ 1.38
TSEN54-201ENST00000333213 PPM1EQ8WY54 764 aa23.68■■□□□ 1.38
TSEN54-201ENST00000333213 IRF7Q92985 503 aa23.68■■□□□ 1.38
TSEN54-201ENST00000333213 C9orf72Q96LT7 481 aa23.68■■□□□ 1.38
TSEN54-201ENST00000333213 MUC3BQ9H195 1237 aa23.68■■□□□ 1.38
TSEN54-201ENST00000333213 GLOD4Q9HC38 313 aa23.68■■□□□ 1.38
TSEN54-201ENST00000333213 SAYSD1Q9NPB0 183 aa23.68■■□□□ 1.38
TSEN54-201ENST00000333213 SNAP91O60641 907 aa23.67■■□□□ 1.38
TSEN54-201ENST00000333213 ZMPSTE24O75844 475 aa23.67■■□□□ 1.38
TSEN54-201ENST00000333213 MT-CYBP00156 380 aaPredicted RBP23.67■■□□□ 1.38
TSEN54-201ENST00000333213 MAGEA4P43358 317 aa23.67■■□□□ 1.38
TSEN54-201ENST00000333213 MAXP61244 160 aa23.67■■□□□ 1.38
TSEN54-201ENST00000333213 PDIA2Q13087 525 aaKnown RBP23.67■■□□□ 1.38
TSEN54-201ENST00000333213 SPARCL1Q14515 664 aa23.67■■□□□ 1.38
TSEN54-201ENST00000333213 KYNUQ16719 465 aa23.67■■□□□ 1.38
TSEN54-201ENST00000333213 ITPRIPL1Q6GPH6 555 aa23.67■■□□□ 1.38
TSEN54-201ENST00000333213 ZNF783Q6ZMS7 281 aa23.67■■□□□ 1.38
TSEN54-201ENST00000333213 KLHDC8BQ8IXV7 354 aa23.67■■□□□ 1.38
TSEN54-201ENST00000333213 SMARCD2Q92925 531 aa23.67■■□□□ 1.38
TSEN54-201ENST00000333213 ZIM3Q96PE6 472 aa23.67■■□□□ 1.38
TSEN54-201ENST00000333213 KIF9Q9HAQ2 790 aa23.67■■□□□ 1.38
TSEN54-201ENST00000333213 CLDND1Q9NY35 253 aa23.67■■□□□ 1.38
TSEN54-201ENST00000333213 TBC1D14Q9P2M4 693 aa23.67■■□□□ 1.38
TSEN54-201ENST00000333213 MUSKO15146 869 aa23.67■■□□□ 1.38
TSEN54-201ENST00000333213 ALOX15BO15296 676 aa23.67■■□□□ 1.38
TSEN54-201ENST00000333213 RIPK2O43353 540 aa23.67■■□□□ 1.38
TSEN54-201ENST00000333213 CPP00450 1065 aa23.67■■□□□ 1.38
TSEN54-201ENST00000333213 PENKP01210 267 aaPredicted RBP23.67■■□□□ 1.38
TSEN54-201ENST00000333213 FCARP24071 287 aa23.67■■□□□ 1.38
TSEN54-201ENST00000333213 ETFBP38117 255 aa23.67■■□□□ 1.38
TSEN54-201ENST00000333213 MAGEA3P43357 314 aa23.67■■□□□ 1.38
TSEN54-201ENST00000333213 ARL4CP56559 192 aa23.67■■□□□ 1.38
TSEN54-201ENST00000333213 TNK2Q07912 1038 aa23.67■■□□□ 1.38
TSEN54-201ENST00000333213 LBRQ14739 615 aaKnown RBP23.67■■□□□ 1.38
TSEN54-201ENST00000333213 APCDD1Q8J025 514 aa23.67■■□□□ 1.38
TSEN54-201ENST00000333213 ASIC4Q96FT7 647 aa23.67■■□□□ 1.38
TSEN54-201ENST00000333213 LMLNQ96KR4 655 aa23.67■■□□□ 1.38
TSEN54-201ENST00000333213 FCRL5Q96RD9 977 aa23.67■■□□□ 1.38
TSEN54-201ENST00000333213 NT5MQ9NPB1 228 aa23.67■■□□□ 1.38
TSEN54-201ENST00000333213 EIF2B3Q9NR50 452 aaKnown RBP23.67■■□□□ 1.38
TSEN54-201ENST00000333213 SPHK2Q9NRA0 654 aa23.67■■□□□ 1.38
TSEN54-201ENST00000333213 GDE1Q9NZC3 331 aa23.67■■□□□ 1.38
TSEN54-201ENST00000333213 NINJ2Q9NZG7 142 aa23.67■■□□□ 1.38
TSEN54-201ENST00000333213 NFS1Q9Y697 457 aa23.67■■□□□ 1.38
TSEN54-201ENST00000333213 ATXN2Q99700 1313 aaKnown RBP23.66■■□□□ 1.38
TSEN54-201ENST00000333213 SRRM3A6NNA2 597 aaPredicted RBP23.66■■□□□ 1.38
TSEN54-201ENST00000333213 CBX4O00257 560 aa23.66■■□□□ 1.38
TSEN54-201ENST00000333213 POU3F3P20264 500 aaPredicted RBP23.66■■□□□ 1.38
TSEN54-201ENST00000333213 CD70P32970 193 aa23.66■■□□□ 1.38
TSEN54-201ENST00000333213 MMP13P45452 471 aa23.66■■□□□ 1.38
TSEN54-201ENST00000333213 OXCT1P55809 520 aa23.66■■□□□ 1.38
TSEN54-201ENST00000333213 LMAN2Q12907 356 aa23.66■■□□□ 1.38
TSEN54-201ENST00000333213 SLC29A2Q14542 456 aa23.66■■□□□ 1.38
TSEN54-201ENST00000333213 LY6G5CQ5SRR4 150 aa23.66■■□□□ 1.38
TSEN54-201ENST00000333213 CFAP58Q5T655 872 aa23.66■■□□□ 1.38
TSEN54-201ENST00000333213 TRIM68Q6AZZ1 485 aa23.66■■□□□ 1.38
TSEN54-201ENST00000333213 CENPUQ71F23 418 aa23.66■■□□□ 1.38
TSEN54-201ENST00000333213 IGDCC3Q8IVU1 814 aa23.66■■□□□ 1.38
TSEN54-201ENST00000333213 ZBED8Q8IZ13 594 aa23.66■■□□□ 1.38
TSEN54-201ENST00000333213 OR2W6PQ8NHA6 318 aa23.66■■□□□ 1.38
TSEN54-201ENST00000333213 FIBINQ8TAL6 211 aa23.66■■□□□ 1.38
TSEN54-201ENST00000333213 LRRC4CQ9HCJ2 640 aa23.66■■□□□ 1.38
TSEN54-201ENST00000333213 PIH1D1Q9NWS0 290 aaKnown RBP23.66■■□□□ 1.38
TSEN54-201ENST00000333213 DOCK8Q8NF50 2099 aa23.65■■□□□ 1.38
TSEN54-201ENST00000333213 TTC24A2A3L6 582 aaPredicted RBP23.65■■□□□ 1.38
TSEN54-201ENST00000333213 USP12O75317 370 aa23.65■■□□□ 1.38
TSEN54-201ENST00000333213 GJB3O75712 270 aa23.65■■□□□ 1.38
TSEN54-201ENST00000333213 AP2A1O95782 977 aa23.65■■□□□ 1.38
TSEN54-201ENST00000333213 IFNAR2P48551 515 aa23.65■■□□□ 1.38
TSEN54-201ENST00000333213 MLLT1Q03111 559 aaPredicted RBP23.65■■□□□ 1.38
TSEN54-201ENST00000333213 CBLBQ13191 982 aa23.65■■□□□ 1.38
TSEN54-201ENST00000333213 COL19A1Q14993 1142 aa23.65■■□□□ 1.38
TSEN54-201ENST00000333213 TTMPQ5BVD1 217 aa23.65■■□□□ 1.38
TSEN54-201ENST00000333213 SPDYCQ5MJ68 293 aa23.65■■□□□ 1.38
TSEN54-201ENST00000333213 ATAT1Q5SQI0 421 aa23.65■■□□□ 1.38
TSEN54-201ENST00000333213 TMCO4Q5TGY1 634 aa23.65■■□□□ 1.38
TSEN54-201ENST00000333213 ASTLQ6HA08 431 aaPredicted RBP23.65■■□□□ 1.38
TSEN54-201ENST00000333213 EP400NLQ6ZTU2 488 aa23.65■■□□□ 1.38
TSEN54-201ENST00000333213 PDIK1LQ8N165 341 aa23.65■■□□□ 1.38
TSEN54-201ENST00000333213 MSLNLQ96KJ4 702 aa23.65■■□□□ 1.38
TSEN54-201ENST00000333213 FAM161BQ96MY7 647 aa23.65■■□□□ 1.38
TSEN54-201ENST00000333213 PHACTR1Q9C0D0 580 aa23.65■■□□□ 1.38
TSEN54-201ENST00000333213 INTS6Q9UL03 887 aaKnown RBP23.65■■□□□ 1.38
TSEN54-201ENST00000333213 TMEM265A0A087WTH1 108 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms