RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 TMPRSS6Q8IU80 811 aa11.57□□□□□ -0.56
COL4A5-201ENST00000328300 AADATQ8N5Z0 425 aa11.57□□□□□ -0.56
COL4A5-201ENST00000328300 CCDC3Q9BQI4 270 aa11.57□□□□□ -0.56
COL4A5-201ENST00000328300 ZDHHC4Q9NPG8 344 aa11.57□□□□□ -0.56
COL4A5-201ENST00000328300 GTF2IRD1Q9UHL9 959 aa11.57□□□□□ -0.56
COL4A5-201ENST00000328300 RABGEF1Q9UJ41 708 aa11.57□□□□□ -0.56
COL4A5-201ENST00000328300 GGA2Q9UJY4 613 aa11.57□□□□□ -0.56
COL4A5-201ENST00000328300 DOT1LQ8TEK3 1739 aa11.57□□□□□ -0.56
COL4A5-201ENST00000328300 KPNA3O00505 521 aaPredicted RBP11.56□□□□□ -0.56
COL4A5-201ENST00000328300 COL6A2P12110 1019 aa11.56□□□□□ -0.56
COL4A5-201ENST00000328300 GPC1P35052 558 aa11.56□□□□□ -0.56
COL4A5-201ENST00000328300 HPCAL1P37235 193 aa11.56□□□□□ -0.56
COL4A5-201ENST00000328300 BMPR2Q13873 1038 aa11.56□□□□□ -0.56
COL4A5-201ENST00000328300 RASA2Q15283 850 aa11.56□□□□□ -0.56
COL4A5-201ENST00000328300 PTPN20Q4JDL3 420 aa11.56□□□□□ -0.56
COL4A5-201ENST00000328300 MILR1Q7Z6M3 343 aa11.56□□□□□ -0.56
COL4A5-201ENST00000328300 DENND1CQ8IV53 801 aa11.56□□□□□ -0.56
COL4A5-201ENST00000328300 SCUBE1Q8IWY4 988 aa11.56□□□□□ -0.56
COL4A5-201ENST00000328300 KYQ8NBH2 561 aa11.56□□□□□ -0.56
COL4A5-201ENST00000328300 ZDHHC6Q9H6R6 413 aa11.56□□□□□ -0.56
COL4A5-201ENST00000328300 KLHL28Q9NXS3 571 aa11.56□□□□□ -0.56
COL4A5-201ENST00000328300 TBC1D3BA6NDS4 549 aa11.56□□□□□ -0.56
COL4A5-201ENST00000328300 FAM47E-STBD1D6RA91 191 aa11.56□□□□□ -0.56
COL4A5-201ENST00000328300 STAU1O95793 577 aaKnown RBP11.56□□□□□ -0.56
COL4A5-201ENST00000328300 NQO1P15559 274 aaKnown RBP11.56□□□□□ -0.56
COL4A5-201ENST00000328300 CD86P42081 329 aa11.56□□□□□ -0.56
COL4A5-201ENST00000328300 CDH4P55283 916 aa11.56□□□□□ -0.56
COL4A5-201ENST00000328300 PKN2Q16513 984 aaKnown RBP11.56□□□□□ -0.56
COL4A5-201ENST00000328300 ZCCHC8Q6NZY4 707 aaKnown RBP11.56□□□□□ -0.56
COL4A5-201ENST00000328300 FUT10Q6P4F1 479 aa11.56□□□□□ -0.56
COL4A5-201ENST00000328300 GPSM1Q86YR5 675 aa11.56□□□□□ -0.56
COL4A5-201ENST00000328300 GLRBP48167 497 aa11.56□□□□□ -0.56
COL4A5-201ENST00000328300 CYP51A1Q16850 503 aa11.56□□□□□ -0.56
COL4A5-201ENST00000328300 WASHC2DQ5SRD0 308 aa11.56□□□□□ -0.56
COL4A5-201ENST00000328300 HGSNATQ68CP4 663 aa11.56□□□□□ -0.56
COL4A5-201ENST00000328300 QKIQ96PU8 341 aaKnown RBP eCLIP11.56□□□□□ -0.562e-6■■■■□ 19.8
COL4A5-201ENST00000328300 TMCC3Q9ULS5 477 aa11.56□□□□□ -0.56
COL4A5-201ENST00000328300 PKD1L3Q7Z443 1732 aa11.56□□□□□ -0.56
COL4A5-201ENST00000328300 CCNT2O60583 730 aaKnown RBP11.56□□□□□ -0.56
COL4A5-201ENST00000328300 ELNP15502 786 aa11.56□□□□□ -0.56
COL4A5-201ENST00000328300 TPH1P17752 444 aa11.56□□□□□ -0.56
COL4A5-201ENST00000328300 FECHP22830 423 aa11.56□□□□□ -0.56
COL4A5-201ENST00000328300 OR1D2P34982 312 aa11.56□□□□□ -0.56
COL4A5-201ENST00000328300 NR6A1Q15406 480 aa11.56□□□□□ -0.56
COL4A5-201ENST00000328300 CRY1Q16526 586 aa11.56□□□□□ -0.56
COL4A5-201ENST00000328300 TCAIMQ8N3R3 496 aa11.56□□□□□ -0.56
COL4A5-201ENST00000328300 CNDP1Q96KN2 507 aa11.56□□□□□ -0.56
COL4A5-201ENST00000328300 FCRL2Q96LA5 508 aaPredicted RBP11.56□□□□□ -0.56
COL4A5-201ENST00000328300 MRPL57Q9BQC6 102 aaKnown RBP11.56□□□□□ -0.56
COL4A5-201ENST00000328300 TRMOQ9BU70 441 aa11.56□□□□□ -0.56
COL4A5-201ENST00000328300 MAGEH1Q9H213 219 aa11.56□□□□□ -0.56
COL4A5-201ENST00000328300 ADGRA3Q8IWK6 1321 aa11.56□□□□□ -0.56
COL4A5-201ENST00000328300 BRCC3P46736 316 aa11.56□□□□□ -0.56
COL4A5-201ENST00000328300 RPL14P50914 215 aaKnown RBP11.56□□□□□ -0.56
COL4A5-201ENST00000328300 CORO7P57737 925 aa11.56□□□□□ -0.56
COL4A5-201ENST00000328300 ELP6Q0PNE2 266 aa11.56□□□□□ -0.56
COL4A5-201ENST00000328300 MKRN4PQ13434 485 aaPredicted RBP11.56□□□□□ -0.56
COL4A5-201ENST00000328300 TRIP10Q15642 601 aa11.56□□□□□ -0.56
COL4A5-201ENST00000328300 KRT78Q8N1N4 520 aa11.56□□□□□ -0.56
COL4A5-201ENST00000328300 CCDC90BQ9GZT6 254 aa11.56□□□□□ -0.56
COL4A5-201ENST00000328300 GNG14A0A1W2PPG7 69 aa11.55□□□□□ -0.56
COL4A5-201ENST00000328300 E7ENQ6 273 aa11.55□□□□□ -0.56
COL4A5-201ENST00000328300 SSTR1P30872 391 aa11.55□□□□□ -0.56
COL4A5-201ENST00000328300 LRRC74AQ0VAA2 488 aa11.55□□□□□ -0.56
COL4A5-201ENST00000328300 FAAP100Q0VG06 881 aa11.55□□□□□ -0.56
COL4A5-201ENST00000328300 C16orf59Q7L2K0 433 aa11.55□□□□□ -0.56
COL4A5-201ENST00000328300 RFWD2Q8NHY2 731 aa11.55□□□□□ -0.56
COL4A5-201ENST00000328300 DNAJC9Q8WXX5 260 aa11.55□□□□□ -0.56
COL4A5-201ENST00000328300 GLOD4Q9HC38 313 aa11.55□□□□□ -0.56
COL4A5-201ENST00000328300 MIEF1Q9NQG6 463 aa11.55□□□□□ -0.56
COL4A5-201ENST00000328300 NDUFA13Q9P0J0 144 aa11.55□□□□□ -0.56
COL4A5-201ENST00000328300 SNX6Q9UNH7 406 aa11.55□□□□□ -0.56
COL4A5-201ENST00000328300 PCDHB1Q9Y5F3 818 aa11.55□□□□□ -0.56
COL4A5-201ENST00000328300 E2F8A0AVK6 867 aa11.55□□□□□ -0.56
COL4A5-201ENST00000328300 SGTAO43765 313 aa11.55□□□□□ -0.56
COL4A5-201ENST00000328300 PAGE1O75459 146 aa11.55□□□□□ -0.56
COL4A5-201ENST00000328300 GOT1P17174 413 aa11.55□□□□□ -0.56
COL4A5-201ENST00000328300 ACLYP53396 1101 aa11.55□□□□□ -0.56
COL4A5-201ENST00000328300 KLC1Q07866 573 aa11.55□□□□□ -0.56
COL4A5-201ENST00000328300 TRIP4Q15650 581 aaPredicted RBP11.55□□□□□ -0.56
COL4A5-201ENST00000328300 SYTL1Q8IYJ3 562 aa11.55□□□□□ -0.56
COL4A5-201ENST00000328300 TERB1Q8NA31 727 aa11.55□□□□□ -0.56
COL4A5-201ENST00000328300 AKAP7Q9P0M2 348 aaPredicted RBP11.55□□□□□ -0.56
COL4A5-201ENST00000328300 MYO1GB0I1T2 1018 aa11.55□□□□□ -0.56
COL4A5-201ENST00000328300 ARVCFO00192 962 aa11.55□□□□□ -0.56
COL4A5-201ENST00000328300 ENDOD1O94919 500 aa11.55□□□□□ -0.56
COL4A5-201ENST00000328300 DDX6P26196 483 aaKnown RBP eCLIP11.55□□□□□ -0.565e-6■■■■■ 46.6
COL4A5-201ENST00000328300 SHROOM1Q2M3G4 852 aaPredicted RBP11.55□□□□□ -0.56
COL4A5-201ENST00000328300 ZNF792Q3KQV3 632 aa11.55□□□□□ -0.56
COL4A5-201ENST00000328300 PIWIL4Q7Z3Z4 852 aaKnown RBP11.55□□□□□ -0.56
COL4A5-201ENST00000328300 MIER2Q8N344 545 aa11.55□□□□□ -0.56
COL4A5-201ENST00000328300 NIPA2Q8N8Q9 360 aa11.55□□□□□ -0.56
COL4A5-201ENST00000328300 FBXL18Q96ME1 805 aa11.55□□□□□ -0.56
COL4A5-201ENST00000328300 OMDQ99983 421 aa11.55□□□□□ -0.56
COL4A5-201ENST00000328300 EIF2B3Q9NR50 452 aaKnown RBP11.55□□□□□ -0.56
COL4A5-201ENST00000328300 IL1RAPL1Q9NZN1 696 aa11.55□□□□□ -0.56
COL4A5-201ENST00000328300 TMEM216Q9P0N5 145 aa11.55□□□□□ -0.56
COL4A5-201ENST00000328300 ENO4A6NNW6 628 aa11.55□□□□□ -0.56
COL4A5-201ENST00000328300 GPR25O00155 361 aa11.55□□□□□ -0.56
COL4A5-201ENST00000328300 PSMD12O00232 456 aaPredicted RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms