RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 NPTX2P47972 431 aa17.08■□□□□ 0.32
SMCHD1-201ENST00000320876 PLD1Q13393 1074 aa17.08■□□□□ 0.32
SMCHD1-201ENST00000320876 BOP1Q14137 746 aaKnown RBP17.08■□□□□ 0.32
SMCHD1-201ENST00000320876 CHCHD6Q9BRQ6 235 aa17.08■□□□□ 0.32
SMCHD1-201ENST00000320876 SLC39A8Q9C0K1 460 aa17.08■□□□□ 0.32
SMCHD1-201ENST00000320876 NINJ2Q9NZG7 142 aa17.08■□□□□ 0.32
SMCHD1-201ENST00000320876 G3V2T6 193 aa17.07■□□□□ 0.32
SMCHD1-201ENST00000320876 CYP27B1O15528 508 aa17.07■□□□□ 0.32
SMCHD1-201ENST00000320876 COX4I1P13073 169 aa17.07■□□□□ 0.32
SMCHD1-201ENST00000320876 PTPAQ15257 358 aa17.07■□□□□ 0.32
SMCHD1-201ENST00000320876 POP1Q99575 1024 aaKnown RBP17.07■□□□□ 0.32
SMCHD1-201ENST00000320876 CLUHO75153 1309 aa17.07■□□□□ 0.32
SMCHD1-201ENST00000320876 ZMYM2Q9UBW7 1377 aa17.07■□□□□ 0.32
SMCHD1-201ENST00000320876 ZNF720Q7Z2F6 126 aa17.07■□□□□ 0.32
SMCHD1-201ENST00000320876 KATNAL2Q8IYT4 538 aa17.07■□□□□ 0.32
SMCHD1-201ENST00000320876 FBXO30Q8TB52 745 aa17.07■□□□□ 0.32
SMCHD1-201ENST00000320876 MRPS31Q92665 395 aaKnown RBP17.07■□□□□ 0.32
SMCHD1-201ENST00000320876 SMARCD1Q96GM5 515 aa17.07■□□□□ 0.32
SMCHD1-201ENST00000320876 ADAM28Q9UKQ2 775 aa17.07■□□□□ 0.32
SMCHD1-201ENST00000320876 ADGRB3O60242 1522 aa17.07■□□□□ 0.32
SMCHD1-201ENST00000320876 ZBTB14O43829 449 aa17.07■□□□□ 0.32
SMCHD1-201ENST00000320876 FDPSP14324 419 aaKnown RBP17.07■□□□□ 0.32
SMCHD1-201ENST00000320876 ZCCHC23Q6ZST2 131 aa17.07■□□□□ 0.32
SMCHD1-201ENST00000320876 KLHL23Q8NBE8 558 aa17.07■□□□□ 0.32
SMCHD1-201ENST00000320876 VAT1Q99536 393 aa17.07■□□□□ 0.32
SMCHD1-201ENST00000320876 TBC1D10AQ9BXI6 508 aa17.07■□□□□ 0.32
SMCHD1-201ENST00000320876 PRDM8Q9NQV8 689 aa17.07■□□□□ 0.32
SMCHD1-201ENST00000320876 APOC4-APOC2K7ER74 178 aa17.07■□□□□ 0.32
SMCHD1-201ENST00000320876 APOC2P02655 101 aa17.07■□□□□ 0.32
SMCHD1-201ENST00000320876 IDO1P14902 403 aa17.07■□□□□ 0.32
SMCHD1-201ENST00000320876 RNF44Q7L0R7 432 aa17.07■□□□□ 0.32
SMCHD1-201ENST00000320876 NELL1Q92832 810 aa17.07■□□□□ 0.32
SMCHD1-201ENST00000320876 FAM126AQ9BYI3 521 aaPredicted RBP17.07■□□□□ 0.32
SMCHD1-201ENST00000320876 LRRC14BA6NHZ5 514 aa17.07■□□□□ 0.32
SMCHD1-201ENST00000320876 THP07101 528 aa17.07■□□□□ 0.32
SMCHD1-201ENST00000320876 ADRA1DP25100 572 aa17.07■□□□□ 0.32
SMCHD1-201ENST00000320876 SPIDRQ14159 915 aa17.07■□□□□ 0.32
SMCHD1-201ENST00000320876 ESRP1Q6NXG1 681 aaKnown RBP17.07■□□□□ 0.32
SMCHD1-201ENST00000320876 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.07■□□□□ 0.32
SMCHD1-201ENST00000320876 MEIOBQ8N635 442 aa17.07■□□□□ 0.32
SMCHD1-201ENST00000320876 ARHGAP20Q9P2F6 1191 aa17.07■□□□□ 0.32
SMCHD1-201ENST00000320876 LEF1Q9UJU2 399 aaPredicted RBP17.07■□□□□ 0.32
SMCHD1-201ENST00000320876 ZNF221Q9UK13 617 aa17.07■□□□□ 0.32
SMCHD1-201ENST00000320876 CRYL1Q9Y2S2 319 aa17.07■□□□□ 0.32
SMCHD1-201ENST00000320876 TDRKHQ9Y2W6 561 aaKnown RBP17.07■□□□□ 0.32
SMCHD1-201ENST00000320876 PCDHGC5Q9Y5F6 944 aa17.07■□□□□ 0.32
SMCHD1-201ENST00000320876 ERN1O75460 977 aaKnown RBP17.07■□□□□ 0.32
SMCHD1-201ENST00000320876 MAPTP10636 758 aaKnown RBP17.07■□□□□ 0.32
SMCHD1-201ENST00000320876 CDC25CP30307 473 aa17.07■□□□□ 0.32
SMCHD1-201ENST00000320876 VPS35Q96QK1 796 aa17.07■□□□□ 0.32
SMCHD1-201ENST00000320876 CCDC28BQ9BUN5 200 aa17.07■□□□□ 0.32
SMCHD1-201ENST00000320876 CRISPLD1Q9H336 500 aa17.07■□□□□ 0.32
SMCHD1-201ENST00000320876 GGA3Q9NZ52 723 aa17.07■□□□□ 0.32
SMCHD1-201ENST00000320876 MTA2O94776 668 aa17.07■□□□□ 0.32
SMCHD1-201ENST00000320876 RBBP4Q09028 425 aa17.07■□□□□ 0.32
SMCHD1-201ENST00000320876 HYIQ5T013 277 aa17.07■□□□□ 0.32
SMCHD1-201ENST00000320876 GPR107Q5VW38 600 aa17.07■□□□□ 0.32
SMCHD1-201ENST00000320876 RNF19BQ6ZMZ0 732 aa17.07■□□□□ 0.32
SMCHD1-201ENST00000320876 GPRC5AQ8NFJ5 357 aa17.07■□□□□ 0.32
SMCHD1-201ENST00000320876 KLK14Q9P0G3 267 aa17.07■□□□□ 0.32
SMCHD1-201ENST00000320876 HPSEQ9Y251 543 aa17.07■□□□□ 0.32
SMCHD1-201ENST00000320876 ENTPD3O75355 529 aa17.06■□□□□ 0.32
SMCHD1-201ENST00000320876 DBTP11182 482 aaKnown RBP17.06■□□□□ 0.32
SMCHD1-201ENST00000320876 OMPP47874 163 aa17.06■□□□□ 0.32
SMCHD1-201ENST00000320876 INSCQ1MX18 579 aa17.06■□□□□ 0.32
SMCHD1-201ENST00000320876 SLC5A9Q2M3M2 681 aa17.06■□□□□ 0.32
SMCHD1-201ENST00000320876 LZTR1Q8N653 840 aa17.06■□□□□ 0.32
SMCHD1-201ENST00000320876 MRPL57Q9BQC6 102 aaKnown RBP17.06■□□□□ 0.32
SMCHD1-201ENST00000320876 PTPRHQ9HD43 1115 aa17.06■□□□□ 0.32
SMCHD1-201ENST00000320876 XPNPEP3Q9NQH7 507 aa17.06■□□□□ 0.32
SMCHD1-201ENST00000320876 DHRS12A0PJE2 317 aa17.06■□□□□ 0.32
SMCHD1-201ENST00000320876 SASH3O75995 380 aa17.06■□□□□ 0.32
SMCHD1-201ENST00000320876 UGT2B15P54855 530 aa17.06■□□□□ 0.32
SMCHD1-201ENST00000320876 POLR2LP62875 67 aaKnown RBP17.06■□□□□ 0.32
SMCHD1-201ENST00000320876 ITIH5Q86UX2 942 aa17.06■□□□□ 0.32
SMCHD1-201ENST00000320876 TEX47Q8TBZ9 253 aa17.06■□□□□ 0.32
SMCHD1-201ENST00000320876 CITED4Q96RK1 184 aa17.06■□□□□ 0.32
SMCHD1-201ENST00000320876 CKLFQ9UBR5 152 aa17.06■□□□□ 0.32
SMCHD1-201ENST00000320876 GNPTGQ9UJJ9 305 aa17.06■□□□□ 0.32
SMCHD1-201ENST00000320876 CPS1P31327 1500 aa17.06■□□□□ 0.32
SMCHD1-201ENST00000320876 TEX46H3BTG2 121 aa17.06■□□□□ 0.32
SMCHD1-201ENST00000320876 PGRMC2O15173 223 aa17.06■□□□□ 0.32
SMCHD1-201ENST00000320876 SERPINA1P01009 418 aa17.06■□□□□ 0.32
SMCHD1-201ENST00000320876 SREBF1P36956 1147 aa17.06■□□□□ 0.32
SMCHD1-201ENST00000320876 TKTL1P51854 596 aa17.06■□□□□ 0.32
SMCHD1-201ENST00000320876 VPS4AQ9UN37 437 aa17.06■□□□□ 0.32
SMCHD1-201ENST00000320876 ST3GAL5Q9UNP4 418 aa17.06■□□□□ 0.32
SMCHD1-201ENST00000320876 BAIAP2Q9UQB8 552 aa17.06■□□□□ 0.32
SMCHD1-201ENST00000320876 CHD4Q14839 1912 aa17.06■□□□□ 0.32
SMCHD1-201ENST00000320876 IQCMA0A1B0GVH7 501 aa17.06■□□□□ 0.32
SMCHD1-201ENST00000320876 LRIG2O94898 1065 aa17.06■□□□□ 0.32
SMCHD1-201ENST00000320876 NT5DC1Q5TFE4 455 aa17.06■□□□□ 0.32
SMCHD1-201ENST00000320876 SENP2Q9HC62 589 aa17.06■□□□□ 0.32
SMCHD1-201ENST00000320876 ARL15Q9NXU5 204 aa17.06■□□□□ 0.32
SMCHD1-201ENST00000320876 TNNI3P19429 210 aa17.06■□□□□ 0.32
SMCHD1-201ENST00000320876 TRIM28Q13263 835 aaKnown RBP17.06■□□□□ 0.32
SMCHD1-201ENST00000320876 ERICH5Q6P6B1 374 aa17.06■□□□□ 0.32
SMCHD1-201ENST00000320876 CD101Q93033 1021 aa17.06■□□□□ 0.32
SMCHD1-201ENST00000320876 SLC47A1Q96FL8 570 aa17.06■□□□□ 0.32
SMCHD1-201ENST00000320876 TMEM169Q96HH4 297 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms