RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 TMEM114B3SHH9 223 aa16.84■□□□□ 0.29
PACS1-201ENST00000320580 PGAM1P18669 254 aa16.84■□□□□ 0.29
PACS1-201ENST00000320580 TFEBP19484 476 aa16.84■□□□□ 0.29
PACS1-201ENST00000320580 KCNJ8Q15842 424 aa16.84■□□□□ 0.29
PACS1-201ENST00000320580 FAAH2Q6GMR7 532 aa16.84■□□□□ 0.29
PACS1-201ENST00000320580 CANT1Q8WVQ1 401 aa16.84■□□□□ 0.29
PACS1-201ENST00000320580 MXRA8Q9BRK3 442 aa16.84■□□□□ 0.29
PACS1-201ENST00000320580 CNPY3Q9BT09 278 aa16.84■□□□□ 0.29
PACS1-201ENST00000320580 CAB39LQ9H9S4 337 aa16.84■□□□□ 0.29
PACS1-201ENST00000320580 NRBP2Q9NSY0 501 aa16.84■□□□□ 0.29
PACS1-201ENST00000320580 ZNF358Q9NW07 568 aa16.84■□□□□ 0.29
PACS1-201ENST00000320580 DMAC2Q9NW81 257 aa16.84■□□□□ 0.29
PACS1-201ENST00000320580 CCDC162PA2VCL2 907 aa16.83■□□□□ 0.29
PACS1-201ENST00000320580 ZSCAN5BA6NJL1 495 aa16.83■□□□□ 0.29
PACS1-201ENST00000320580 AURKAO14965 403 aa16.83■□□□□ 0.29
PACS1-201ENST00000320580 KRT6AP02538 564 aa16.83■□□□□ 0.29
PACS1-201ENST00000320580 KRT6BP04259 564 aa16.83■□□□□ 0.29
PACS1-201ENST00000320580 RPS9P46781 194 aaKnown RBP16.83■□□□□ 0.29
PACS1-201ENST00000320580 CSHL1Q14406 222 aa16.83■□□□□ 0.29
PACS1-201ENST00000320580 TTLL6Q8N841 843 aa16.83■□□□□ 0.29
PACS1-201ENST00000320580 DNAJB14Q8TBM8 379 aa16.83■□□□□ 0.29
PACS1-201ENST00000320580 URGCPQ8TCY9 931 aa16.83■□□□□ 0.29
PACS1-201ENST00000320580 HSD17B14Q9BPX1 270 aa16.83■□□□□ 0.29
PACS1-201ENST00000320580 IFT80Q9P2H3 777 aaPredicted RBP16.83■□□□□ 0.29
PACS1-201ENST00000320580 FNDC3AQ9Y2H6 1198 aaKnown RBP16.83■□□□□ 0.29
PACS1-201ENST00000320580 H0Y858 1186 aa16.83■□□□□ 0.28
PACS1-201ENST00000320580 PAPSS1O43252 624 aaPredicted RBP16.83■□□□□ 0.28
PACS1-201ENST00000320580 PTPN1P18031 435 aaKnown RBP16.83■□□□□ 0.28
PACS1-201ENST00000320580 GCAP28676 217 aa16.83■□□□□ 0.28
PACS1-201ENST00000320580 SOX6P35712 828 aa16.83■□□□□ 0.28
PACS1-201ENST00000320580 FRG1Q14331 258 aaKnown RBP16.83■□□□□ 0.28
PACS1-201ENST00000320580 IGDCC3Q8IVU1 814 aa16.83■□□□□ 0.28
PACS1-201ENST00000320580 ZNF420Q8TAQ5 688 aaPredicted RBP16.83■□□□□ 0.28
PACS1-201ENST00000320580 BHMTQ93088 406 aa16.83■□□□□ 0.28
PACS1-201ENST00000320580 VPS33AQ96AX1 596 aa16.83■□□□□ 0.28
PACS1-201ENST00000320580 NLRP4Q96MN2 994 aa16.83■□□□□ 0.28
PACS1-201ENST00000320580 FSD1LQ9BXM9 530 aa16.83■□□□□ 0.28
PACS1-201ENST00000320580 SENP6Q9GZR1 1112 aaPredicted RBP16.83■□□□□ 0.28
PACS1-201ENST00000320580 TUT1Q9H6E5 874 aaKnown RBP16.83■□□□□ 0.28
PACS1-201ENST00000320580 DPP3Q9NY33 737 aa16.83■□□□□ 0.28
PACS1-201ENST00000320580 CNOT6Q9ULM6 557 aaKnown RBP16.83■□□□□ 0.28
PACS1-201ENST00000320580 ZNRF3Q9ULT6 936 aa16.83■□□□□ 0.28
PACS1-201ENST00000320580 WBP11Q9Y2W2 641 aaKnown RBP16.83■□□□□ 0.28
PACS1-201ENST00000320580 PCDHB12Q9Y5F1 795 aa16.83■□□□□ 0.28
PACS1-201ENST00000320580 PCDHA10Q9Y5I2 948 aa16.83■□□□□ 0.28
PACS1-201ENST00000320580 MYH1P12882 1939 aa16.83■□□□□ 0.28
PACS1-201ENST00000320580 MYH2Q9UKX2 1941 aa16.83■□□□□ 0.28
PACS1-201ENST00000320580 MYH4Q9Y623 1939 aa16.83■□□□□ 0.28
PACS1-201ENST00000320580 EI24O14681 340 aa16.83■□□□□ 0.28
PACS1-201ENST00000320580 MTSS1O43312 755 aa16.83■□□□□ 0.28
PACS1-201ENST00000320580 SH3BP5O60239 455 aa16.83■□□□□ 0.28
PACS1-201ENST00000320580 NRP2O60462 931 aa16.83■□□□□ 0.28
PACS1-201ENST00000320580 SFNP31947 248 aa16.83■□□□□ 0.28
PACS1-201ENST00000320580 PDK2Q15119 407 aa16.83■□□□□ 0.28
PACS1-201ENST00000320580 MINDY2Q8NBR6 621 aa16.83■□□□□ 0.28
PACS1-201ENST00000320580 TSPAN18Q96SJ8 248 aa16.83■□□□□ 0.28
PACS1-201ENST00000320580 MED10Q9BTT4 135 aa16.83■□□□□ 0.28
PACS1-201ENST00000320580 THUMPD3Q9BV44 507 aaKnown RBP16.83■□□□□ 0.28
PACS1-201ENST00000320580 GPR88Q9GZN0 384 aa16.83■□□□□ 0.28
PACS1-201ENST00000320580 UNC93B1Q9H1C4 597 aa16.83■□□□□ 0.28
PACS1-201ENST00000320580 CACNA2D2Q9NY47 1150 aa16.83■□□□□ 0.28
PACS1-201ENST00000320580 CYP3A7-CYP3A51PA0A087WV96 503 aa16.82■□□□□ 0.28
PACS1-201ENST00000320580 PNMA8CA0A1B0GUJ8 204 aa16.82■□□□□ 0.28
PACS1-201ENST00000320580 BHMG1C9JSJ3 638 aaPredicted RBP16.82■□□□□ 0.28
PACS1-201ENST00000320580 PPP1R11O60927 126 aaPredicted RBP16.82■□□□□ 0.28
PACS1-201ENST00000320580 FUCA1P04066 466 aa16.82■□□□□ 0.28
PACS1-201ENST00000320580 CD48P09326 243 aa16.82■□□□□ 0.28
PACS1-201ENST00000320580 CYP3A7P24462 503 aa16.82■□□□□ 0.28
PACS1-201ENST00000320580 SLC7A1P30825 629 aa16.82■□□□□ 0.28
PACS1-201ENST00000320580 MYL6P60660 151 aa16.82■□□□□ 0.28
PACS1-201ENST00000320580 PPIL2Q13356 520 aa16.82■□□□□ 0.28
PACS1-201ENST00000320580 PTPN20Q4JDL3 420 aa16.82■□□□□ 0.28
PACS1-201ENST00000320580 ARL13AQ5H913 290 aaPredicted RBP16.82■□□□□ 0.28
PACS1-201ENST00000320580 TXNRD3NBQ6F5E7 133 aa16.82■□□□□ 0.28
PACS1-201ENST00000320580 KCNT2Q6UVM3 1135 aa16.82■□□□□ 0.28
PACS1-201ENST00000320580 LDHDQ86WU2 507 aa16.82■□□□□ 0.28
PACS1-201ENST00000320580 CNTD1Q8N815 330 aa16.82■□□□□ 0.28
PACS1-201ENST00000320580 GATA5Q9BWX5 397 aaPredicted RBP16.82■□□□□ 0.28
PACS1-201ENST00000320580 MTMR12Q9C0I1 747 aa16.82■□□□□ 0.28
PACS1-201ENST00000320580 NUAK2Q9H093 628 aa16.82■□□□□ 0.28
PACS1-201ENST00000320580 RUBCNLQ9H714 662 aa16.82■□□□□ 0.28
PACS1-201ENST00000320580 TRMT13Q9NUP7 481 aaKnown RBP16.82■□□□□ 0.28
PACS1-201ENST00000320580 RABL2AQ9UBK7 228 aaPredicted RBP16.82■□□□□ 0.28
PACS1-201ENST00000320580 MTRRQ9UBK8 725 aa16.82■□□□□ 0.28
PACS1-201ENST00000320580 MEIS2O14770 477 aa16.82■□□□□ 0.28
PACS1-201ENST00000320580 AREL1O15033 823 aa16.82■□□□□ 0.28
PACS1-201ENST00000320580 FAM20BO75063 409 aa16.82■□□□□ 0.28
PACS1-201ENST00000320580 BCAS2O75934 225 aaPredicted RBP16.82■□□□□ 0.28
PACS1-201ENST00000320580 BMP10O95393 424 aa16.82■□□□□ 0.28
PACS1-201ENST00000320580 FYNP06241 537 aa16.82■□□□□ 0.28
PACS1-201ENST00000320580 HNRNPLP14866 589 aaKnown RBP eCLIP16.82■□□□□ 0.282e-10■■□□□ 11.5
PACS1-201ENST00000320580 FAM98BQ52LJ0 330 aaKnown RBP16.82■□□□□ 0.28
PACS1-201ENST00000320580 ZC3H3Q8IXZ2 948 aaKnown RBP16.82■□□□□ 0.28
PACS1-201ENST00000320580 FIBCD1Q8N539 461 aa16.82■□□□□ 0.28
PACS1-201ENST00000320580 OR6B3Q8NGW1 331 aa16.82■□□□□ 0.28
PACS1-201ENST00000320580 FBXL20Q96IG2 436 aa16.82■□□□□ 0.28
PACS1-201ENST00000320580 A0A1W2PQ72 361 aa16.82■□□□□ 0.28
PACS1-201ENST00000320580 DGAT1O75907 488 aa16.82■□□□□ 0.28
PACS1-201ENST00000320580 NFIL3Q16649 462 aa16.82■□□□□ 0.28
PACS1-201ENST00000320580 LRRC8DQ7L1W4 858 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms