RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 SPATA22Q8NHS9 363 aa18.14■□□□□ 0.49
RAB39A-201ENST00000320578 MRRFQ96E11 262 aaKnown RBP18.14■□□□□ 0.49
RAB39A-201ENST00000320578 CHMP6Q96FZ7 201 aa18.14■□□□□ 0.49
RAB39A-201ENST00000320578 ZNF317Q96PQ6 595 aaPredicted RBP18.14■□□□□ 0.49
RAB39A-201ENST00000320578 CCT8L2Q96SF2 557 aa18.14■□□□□ 0.49
RAB39A-201ENST00000320578 ATP13A1Q9HD20 1204 aa18.14■□□□□ 0.49
RAB39A-201ENST00000320578 TLR9Q9NR96 1032 aa18.14■□□□□ 0.49
RAB39A-201ENST00000320578 RPS6KL1Q9Y6S9 549 aa18.14■□□□□ 0.49
RAB39A-201ENST00000320578 A0A1W2PPM1 405 aa18.13■□□□□ 0.49
RAB39A-201ENST00000320578 LCHNA4D1U4 455 aa18.13■□□□□ 0.49
RAB39A-201ENST00000320578 LINC01553A4QN01 128 aa18.13■□□□□ 0.49
RAB39A-201ENST00000320578 FOXO6A8MYZ6 492 aa18.13■□□□□ 0.49
RAB39A-201ENST00000320578 KDELR3O43731 214 aa18.13■□□□□ 0.49
RAB39A-201ENST00000320578 USP12O75317 370 aa18.13■□□□□ 0.49
RAB39A-201ENST00000320578 ZWINTO95229 277 aa18.13■□□□□ 0.49
RAB39A-201ENST00000320578 SPATA31D3P0C874 917 aa18.13■□□□□ 0.49
RAB39A-201ENST00000320578 KRT4P19013 534 aa18.13■□□□□ 0.49
RAB39A-201ENST00000320578 CA8P35219 290 aa18.13■□□□□ 0.49
RAB39A-201ENST00000320578 EPHA5P54756 1037 aa18.13■□□□□ 0.49
RAB39A-201ENST00000320578 CRADDP78560 199 aa18.13■□□□□ 0.49
RAB39A-201ENST00000320578 ZSCAN26Q16670 478 aa18.13■□□□□ 0.49
RAB39A-201ENST00000320578 SPATA31D4Q6ZUB0 917 aa18.13■□□□□ 0.49
RAB39A-201ENST00000320578 BBS5Q8N3I7 341 aa18.13■□□□□ 0.49
RAB39A-201ENST00000320578 BANPQ8N9N5 519 aa18.13■□□□□ 0.49
RAB39A-201ENST00000320578 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.13■□□□□ 0.49
RAB39A-201ENST00000320578 ADAMTS19Q8TE59 1207 aa18.13■□□□□ 0.49
RAB39A-201ENST00000320578 POF1BQ8WVV4 589 aa18.13■□□□□ 0.49
RAB39A-201ENST00000320578 CKAP2Q8WWK9 683 aa18.13■□□□□ 0.49
RAB39A-201ENST00000320578 CERS2Q96G23 380 aa18.13■□□□□ 0.49
RAB39A-201ENST00000320578 MRGPRX2Q96LB1 330 aa18.13■□□□□ 0.49
RAB39A-201ENST00000320578 HTATIP2Q9BUP3 242 aa18.13■□□□□ 0.49
RAB39A-201ENST00000320578 ACE2Q9BYF1 805 aaPredicted RBP18.13■□□□□ 0.49
RAB39A-201ENST00000320578 ANAPC1Q9H1A4 1944 aa18.13■□□□□ 0.49
RAB39A-201ENST00000320578 ZCWPW2A0A1B0GU75 182 aa18.12■□□□□ 0.49
RAB39A-201ENST00000320578 TM9SF1O15321 606 aa18.12■□□□□ 0.49
RAB39A-201ENST00000320578 MT-CYBP00156 380 aaPredicted RBP18.12■□□□□ 0.49
RAB39A-201ENST00000320578 HOXD9P28356 352 aaPredicted RBP18.12■□□□□ 0.49
RAB39A-201ENST00000320578 HOXA9P31269 272 aa18.12■□□□□ 0.49
RAB39A-201ENST00000320578 ACVRL1P37023 503 aa18.12■□□□□ 0.49
RAB39A-201ENST00000320578 CLCN4P51793 760 aa18.12■□□□□ 0.49
RAB39A-201ENST00000320578 RPS24P62847 133 aaKnown RBP18.12■□□□□ 0.49
RAB39A-201ENST00000320578 CERCAMQ5T4B2 595 aa18.12■□□□□ 0.49
RAB39A-201ENST00000320578 PDE12Q6L8Q7 609 aaKnown RBP18.12■□□□□ 0.49
RAB39A-201ENST00000320578 HTR3DQ70Z44 454 aa18.12■□□□□ 0.49
RAB39A-201ENST00000320578 CFAP52Q8N1V2 620 aa18.12■□□□□ 0.49
RAB39A-201ENST00000320578 ARL14EPQ8N8R7 260 aaPredicted RBP18.12■□□□□ 0.49
RAB39A-201ENST00000320578 PABPC5Q96DU9 382 aaKnown RBP18.12■□□□□ 0.49
RAB39A-201ENST00000320578 GCNAQ96QF7 691 aa18.12■□□□□ 0.49
RAB39A-201ENST00000320578 TRPC7Q9HCX4 862 aa18.12■□□□□ 0.49
RAB39A-201ENST00000320578 NT5MQ9NPB1 228 aa18.12■□□□□ 0.49
RAB39A-201ENST00000320578 MKS1Q9NXB0 559 aa18.12■□□□□ 0.49
RAB39A-201ENST00000320578 UBP1Q9NZI7 540 aa18.12■□□□□ 0.49
RAB39A-201ENST00000320578 LSM7Q9UK45 103 aaKnown RBP18.12■□□□□ 0.49
RAB39A-201ENST00000320578 SHROOM3Q8TF72 1996 aa18.12■□□□□ 0.49
RAB39A-201ENST00000320578 NDUFAB1O14561 156 aa18.12■□□□□ 0.49
RAB39A-201ENST00000320578 LPXNO60711 386 aa18.12■□□□□ 0.49
RAB39A-201ENST00000320578 ASMTLO95671 621 aa18.12■□□□□ 0.49
RAB39A-201ENST00000320578 DDX6P26196 483 aaKnown RBP eCLIP18.12■□□□□ 0.49
RAB39A-201ENST00000320578 SEC24CP53992 1094 aa18.12■□□□□ 0.49
RAB39A-201ENST00000320578 WNT3AP56704 352 aa18.12■□□□□ 0.49
RAB39A-201ENST00000320578 IL9RQ01113 521 aa18.12■□□□□ 0.49
RAB39A-201ENST00000320578 OLIG2Q13516 323 aa18.12■□□□□ 0.49
RAB39A-201ENST00000320578 TXNDC8Q6A555 127 aa18.12■□□□□ 0.49
RAB39A-201ENST00000320578 CPXM2Q8N436 756 aa18.12■□□□□ 0.49
RAB39A-201ENST00000320578 HJURPQ8NCD3 748 aaPredicted RBP18.12■□□□□ 0.49
RAB39A-201ENST00000320578 IPMKQ8NFU5 416 aa18.12■□□□□ 0.49
RAB39A-201ENST00000320578 ARRDC2Q8TBH0 407 aa18.12■□□□□ 0.49
RAB39A-201ENST00000320578 WBP2Q969T9 261 aa18.12■□□□□ 0.49
RAB39A-201ENST00000320578 SAMD11Q96NU1 681 aa18.12■□□□□ 0.49
RAB39A-201ENST00000320578 FCRL3Q96P31 734 aaPredicted RBP18.12■□□□□ 0.49
RAB39A-201ENST00000320578 TRIM56Q9BRZ2 755 aaKnown RBP18.12■□□□□ 0.49
RAB39A-201ENST00000320578 FICDQ9BVA6 458 aa18.12■□□□□ 0.49
RAB39A-201ENST00000320578 POLR1EQ9GZS1 481 aaKnown RBP18.12■□□□□ 0.49
RAB39A-201ENST00000320578 ALG13Q9NP73 1137 aaKnown RBP18.12■□□□□ 0.49
RAB39A-201ENST00000320578 ASAH2Q9NR71 780 aa18.12■□□□□ 0.49
RAB39A-201ENST00000320578 PIH1D1Q9NWS0 290 aaKnown RBP18.12■□□□□ 0.49
RAB39A-201ENST00000320578 PRKAG3Q9UGI9 489 aa18.12■□□□□ 0.49
RAB39A-201ENST00000320578 CPQQ9Y646 472 aa18.12■□□□□ 0.49
RAB39A-201ENST00000320578 TRAV19A0A0A6YYK7 116 aa18.11■□□□□ 0.49
RAB39A-201ENST00000320578 PIAS1O75925 651 aa18.11■□□□□ 0.49
RAB39A-201ENST00000320578 EPOP01588 193 aa18.11■□□□□ 0.49
RAB39A-201ENST00000320578 RHOCP08134 193 aa18.11■□□□□ 0.49
RAB39A-201ENST00000320578 MMP2P08253 660 aa18.11■□□□□ 0.49
RAB39A-201ENST00000320578 IRF1P10914 325 aa18.11■□□□□ 0.49
RAB39A-201ENST00000320578 CES1P23141 567 aa18.11■□□□□ 0.49
RAB39A-201ENST00000320578 PPM1LQ5SGD2 360 aa18.11■□□□□ 0.49
RAB39A-201ENST00000320578 PKN3Q6P5Z2 889 aa18.11■□□□□ 0.49
RAB39A-201ENST00000320578 ZNF354CQ86Y25 554 aa18.11■□□□□ 0.49
RAB39A-201ENST00000320578 C4orf33Q8N1A6 199 aa18.11■□□□□ 0.49
RAB39A-201ENST00000320578 ANKRD42Q8N9B4 389 aa18.11■□□□□ 0.49
RAB39A-201ENST00000320578 LEMD2Q8NC56 503 aa18.11■□□□□ 0.49
RAB39A-201ENST00000320578 DYDC1Q8WWB3 177 aa18.11■□□□□ 0.49
RAB39A-201ENST00000320578 MAGEB18Q96M61 343 aa18.11■□□□□ 0.49
RAB39A-201ENST00000320578 SLC22A12Q96S37 553 aa18.11■□□□□ 0.49
RAB39A-201ENST00000320578 RANBP9Q96S59 729 aa18.11■□□□□ 0.49
RAB39A-201ENST00000320578 CYP2S1Q96SQ9 504 aa18.11■□□□□ 0.49
RAB39A-201ENST00000320578 CPNE1Q99829 537 aa18.11■□□□□ 0.49
RAB39A-201ENST00000320578 LBHD1Q9BQE6 289 aaPredicted RBP18.11■□□□□ 0.49
RAB39A-201ENST00000320578 FSD1LQ9BXM9 530 aa18.11■□□□□ 0.49
RAB39A-201ENST00000320578 KIF9Q9HAQ2 790 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms