RNA–Protein interactions for RNA: ENST00000317376.8

SPOCK2-201, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SPOCK2, Length 5,328 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK2-201ENST00000317376 C12orf29Q8N999 325 aa13.69□□□□□ -0.22
SPOCK2-201ENST00000317376 USP6NLQ92738 828 aa13.69□□□□□ -0.22
SPOCK2-201ENST00000317376 TCEA3O75764 348 aa13.68□□□□□ -0.22
SPOCK2-201ENST00000317376 MLNP12872 115 aa13.68□□□□□ -0.22
SPOCK2-201ENST00000317376 PAX3P23760 479 aa13.68□□□□□ -0.22
SPOCK2-201ENST00000317376 CCDC149Q6ZUS6 474 aa13.68□□□□□ -0.22
SPOCK2-201ENST00000317376 PIGWQ7Z7B1 504 aa13.68□□□□□ -0.22
SPOCK2-201ENST00000317376 PRDM12Q9H4Q4 367 aa13.68□□□□□ -0.22
SPOCK2-201ENST00000317376 ZNF711Q9Y462 761 aa13.68□□□□□ -0.22
SPOCK2-201ENST00000317376 AP4S1Q9Y587 144 aa13.68□□□□□ -0.22
SPOCK2-201ENST00000317376 ADH1AP07327 375 aa13.68□□□□□ -0.22
SPOCK2-201ENST00000317376 CKBP12277 381 aa13.68□□□□□ -0.22
SPOCK2-201ENST00000317376 DEPDC1Q5TB30 811 aa13.68□□□□□ -0.22
SPOCK2-201ENST00000317376 FAM171A1Q5VUB5 890 aa13.68□□□□□ -0.22
SPOCK2-201ENST00000317376 PACS1Q6VY07 963 aa13.68□□□□□ -0.22
SPOCK2-201ENST00000317376 UNC5AQ6ZN44 842 aa13.68□□□□□ -0.22
SPOCK2-201ENST00000317376 BBS7Q8IWZ6 715 aa13.68□□□□□ -0.22
SPOCK2-201ENST00000317376 PHF21BQ96EK2 531 aa13.68□□□□□ -0.22
SPOCK2-201ENST00000317376 DUSP16Q9BY84 665 aa13.68□□□□□ -0.22
SPOCK2-201ENST00000317376 ATXN3LQ9H3M9 355 aa13.68□□□□□ -0.22
SPOCK2-201ENST00000317376 RABGEF1Q9UJ41 708 aa13.68□□□□□ -0.22
SPOCK2-201ENST00000317376 FANCGO15287 622 aa13.68□□□□□ -0.22
SPOCK2-201ENST00000317376 TGDSO95455 350 aa13.68□□□□□ -0.22
SPOCK2-201ENST00000317376 PIGRP01833 764 aa13.68□□□□□ -0.22
SPOCK2-201ENST00000317376 NFKB1P19838 968 aa13.68□□□□□ -0.22
SPOCK2-201ENST00000317376 MAPK1P28482 360 aa13.68□□□□□ -0.22
SPOCK2-201ENST00000317376 HOXD13P35453 343 aa13.68□□□□□ -0.22
SPOCK2-201ENST00000317376 TRPC1P48995 793 aa13.68□□□□□ -0.22
SPOCK2-201ENST00000317376 ERAP2Q6P179 960 aa13.68□□□□□ -0.22
SPOCK2-201ENST00000317376 MICU2Q8IYU8 434 aa13.68□□□□□ -0.22
SPOCK2-201ENST00000317376 MIER2Q8N344 545 aa13.68□□□□□ -0.22
SPOCK2-201ENST00000317376 TERB1Q8NA31 727 aa13.68□□□□□ -0.22
SPOCK2-201ENST00000317376 DIS3LQ8TF46 1054 aaKnown RBP13.68□□□□□ -0.22
SPOCK2-201ENST00000317376 UROC1Q96N76 676 aa13.68□□□□□ -0.22
SPOCK2-201ENST00000317376 FAM192AQ9GZU8 254 aa13.68□□□□□ -0.22
SPOCK2-201ENST00000317376 BCAS3Q9H6U6 928 aa13.68□□□□□ -0.22
SPOCK2-201ENST00000317376 DDX28Q9NUL7 540 aaKnown RBP13.68□□□□□ -0.22
SPOCK2-201ENST00000317376 FETUBQ9UGM5 382 aa13.68□□□□□ -0.22
SPOCK2-201ENST00000317376 PTCH2Q9Y6C5 1203 aa13.68□□□□□ -0.22
SPOCK2-201ENST00000317376 RTN3O95197 1032 aaPredicted RBP13.68□□□□□ -0.22
SPOCK2-201ENST00000317376 BDNFP23560 247 aa13.68□□□□□ -0.22
SPOCK2-201ENST00000317376 RANBP1P43487 201 aa13.68□□□□□ -0.22
SPOCK2-201ENST00000317376 CLK1P49759 484 aaKnown RBP13.68□□□□□ -0.22
SPOCK2-201ENST00000317376 SERPINH1P50454 418 aaKnown RBP13.68□□□□□ -0.22
SPOCK2-201ENST00000317376 C9orf57Q5W0N0 161 aa13.68□□□□□ -0.22
SPOCK2-201ENST00000317376 ECHDC2Q86YB7 292 aa13.68□□□□□ -0.22
SPOCK2-201ENST00000317376 HIC2Q96JB3 615 aa13.68□□□□□ -0.22
SPOCK2-201ENST00000317376 CDRT15Q96T59 188 aa13.68□□□□□ -0.22
SPOCK2-201ENST00000317376 SLC25A23Q9BV35 468 aa13.68□□□□□ -0.22
SPOCK2-201ENST00000317376 SYBUQ9NX95 663 aa13.68□□□□□ -0.22
SPOCK2-201ENST00000317376 BEX3Q00994 111 aa13.67□□□□□ -0.22
SPOCK2-201ENST00000317376 CREMQ03060 361 aa13.67□□□□□ -0.22
SPOCK2-201ENST00000317376 CHRNB3Q05901 458 aa13.67□□□□□ -0.22
SPOCK2-201ENST00000317376 SLC1A5Q15758 541 aa13.67□□□□□ -0.22
SPOCK2-201ENST00000317376 SLC25A52Q3SY17 297 aa13.67□□□□□ -0.22
SPOCK2-201ENST00000317376 ZBTB49Q6ZSB9 765 aa13.67□□□□□ -0.22
SPOCK2-201ENST00000317376 ANKRD23Q86SG2 305 aa13.67□□□□□ -0.22
SPOCK2-201ENST00000317376 HERC6Q8IVU3 1022 aa13.67□□□□□ -0.22
SPOCK2-201ENST00000317376 LPCAT1Q8NF37 534 aa13.67□□□□□ -0.22
SPOCK2-201ENST00000317376 PHF21AQ96BD5 680 aa13.67□□□□□ -0.22
SPOCK2-201ENST00000317376 RMND5AQ9H871 391 aa13.67□□□□□ -0.22
SPOCK2-201ENST00000317376 ZNF180Q9UJW8 692 aa13.67□□□□□ -0.22
SPOCK2-201ENST00000317376 PLLPQ9Y342 182 aa13.67□□□□□ -0.22
SPOCK2-201ENST00000317376 MRASO14807 208 aa13.67□□□□□ -0.22
SPOCK2-201ENST00000317376 KDM1AO60341 852 aa13.67□□□□□ -0.22
SPOCK2-201ENST00000317376 VNN1O95497 513 aa13.67□□□□□ -0.22
SPOCK2-201ENST00000317376 BPGMP07738 259 aa13.67□□□□□ -0.22
SPOCK2-201ENST00000317376 CRHR1P34998 444 aa13.67□□□□□ -0.22
SPOCK2-201ENST00000317376 DHFR2Q86XF0 187 aa13.67□□□□□ -0.22
SPOCK2-201ENST00000317376 LRRC49Q8IUZ0 686 aa13.67□□□□□ -0.22
SPOCK2-201ENST00000317376 NIPA2Q8N8Q9 360 aa13.67□□□□□ -0.22
SPOCK2-201ENST00000317376 ZFRQ96KR1 1074 aaKnown RBP13.67□□□□□ -0.22
SPOCK2-201ENST00000317376 C12orf42Q96LP6 360 aa13.67□□□□□ -0.22
SPOCK2-201ENST00000317376 SCN3BQ9NY72 215 aa13.67□□□□□ -0.22
SPOCK2-201ENST00000317376 NUDT5Q9UKK9 219 aa13.67□□□□□ -0.22
SPOCK2-201ENST00000317376 HES2Q9Y543 173 aa13.67□□□□□ -0.22
SPOCK2-201ENST00000317376 GOLGA8TH3BQL2 631 aa13.67□□□□□ -0.22
SPOCK2-201ENST00000317376 DHX15O43143 795 aaKnown RBP13.67□□□□□ -0.22
SPOCK2-201ENST00000317376 PHGDHO43175 533 aaKnown RBP13.67□□□□□ -0.22
SPOCK2-201ENST00000317376 COX4I1P13073 169 aa13.67□□□□□ -0.22
SPOCK2-201ENST00000317376 GPC1P35052 558 aa13.67□□□□□ -0.22
SPOCK2-201ENST00000317376 CAMK2GQ13555 558 aaPredicted RBP13.67□□□□□ -0.22
SPOCK2-201ENST00000317376 HSDL1Q3SXM5 330 aa13.67□□□□□ -0.22
SPOCK2-201ENST00000317376 FBXO39Q8N4B4 442 aa13.67□□□□□ -0.22
SPOCK2-201ENST00000317376 PPP1R13LQ8WUF5 828 aa13.67□□□□□ -0.22
SPOCK2-201ENST00000317376 LGMNQ99538 433 aa13.67□□□□□ -0.22
SPOCK2-201ENST00000317376 BAZ2AQ9UIF9 1905 aaKnown RBP13.67□□□□□ -0.22
SPOCK2-201ENST00000317376 WDR47O94967 919 aa13.67□□□□□ -0.22
SPOCK2-201ENST00000317376 ZNF23P17027 643 aa13.67□□□□□ -0.22
SPOCK2-201ENST00000317376 NEK2P51955 445 aa13.67□□□□□ -0.22
SPOCK2-201ENST00000317376 NEPROQ6NW34 567 aa13.67□□□□□ -0.22
SPOCK2-201ENST00000317376 C1orf127Q8N9H9 656 aa13.67□□□□□ -0.22
SPOCK2-201ENST00000317376 TRAPPC9Q96Q05 1148 aa13.67□□□□□ -0.22
SPOCK2-201ENST00000317376 GAD1Q99259 594 aa13.67□□□□□ -0.22
SPOCK2-201ENST00000317376 KCTD14Q9BQ13 255 aaPredicted RBP13.67□□□□□ -0.22
SPOCK2-201ENST00000317376 POLG2Q9UHN1 485 aa13.67□□□□□ -0.22
SPOCK2-201ENST00000317376 M0R3G1 203 aa13.66□□□□□ -0.22
SPOCK2-201ENST00000317376 MDM4O15151 490 aa13.66□□□□□ -0.22
SPOCK2-201ENST00000317376 ENTPD5O75356 428 aa13.66□□□□□ -0.22
SPOCK2-201ENST00000317376 TP53BP2Q13625 1128 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms