RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 RTL10Q7L3V2 364 aa4.35□□□□□ -1.71
SMCO3-201ENST00000316048 ENOSF1Q7L5Y1 443 aa4.35□□□□□ -1.71
SMCO3-201ENST00000316048 SFTPA1Q8IWL2 248 aa4.35□□□□□ -1.71
SMCO3-201ENST00000316048 OR8H2Q8N162 312 aa4.35□□□□□ -1.71
SMCO3-201ENST00000316048 TTC9BQ8N6N2 239 aa4.35□□□□□ -1.71
SMCO3-201ENST00000316048 ZMIZ2Q8NF64 920 aa4.35□□□□□ -1.71
SMCO3-201ENST00000316048 ACTRT2Q8TDY3 377 aa4.35□□□□□ -1.71
SMCO3-201ENST00000316048 LENG9Q96B70 501 aa4.35□□□□□ -1.71
SMCO3-201ENST00000316048 PIP5K1AQ99755 562 aa4.35□□□□□ -1.71
SMCO3-201ENST00000316048 TREX2Q9BQ50 279 aaPredicted RBP4.35□□□□□ -1.71
SMCO3-201ENST00000316048 ADGRE3Q9BY15 652 aa4.35□□□□□ -1.71
SMCO3-201ENST00000316048 EPHX3Q9H6B9 360 aa4.35□□□□□ -1.71
SMCO3-201ENST00000316048 VEZTQ9HBM0 779 aa4.35□□□□□ -1.71
SMCO3-201ENST00000316048 BEX4Q9NWD9 120 aaPredicted RBP4.35□□□□□ -1.71
SMCO3-201ENST00000316048 FBXO4Q9UKT5 387 aa4.35□□□□□ -1.71
SMCO3-201ENST00000316048 LRRC7Q96NW7 1537 aa4.35□□□□□ -1.71
SMCO3-201ENST00000316048 RGPD8O14715 1765 aaPredicted RBP4.35□□□□□ -1.71
SMCO3-201ENST00000316048 KDM3AQ9Y4C1 1321 aa4.35□□□□□ -1.71
SMCO3-201ENST00000316048 CNTN5O94779 1100 aa4.34□□□□□ -1.71
SMCO3-201ENST00000316048 METTL18O95568 372 aa4.34□□□□□ -1.71
SMCO3-201ENST00000316048 TTLL1O95922 423 aa4.34□□□□□ -1.71
SMCO3-201ENST00000316048 HSP90AA1P07900 732 aaKnown RBP4.34□□□□□ -1.71
SMCO3-201ENST00000316048 CYP4B1P13584 511 aa4.34□□□□□ -1.71
SMCO3-201ENST00000316048 TYK2P29597 1187 aa4.34□□□□□ -1.71
SMCO3-201ENST00000316048 PTGS2P35354 604 aa4.34□□□□□ -1.71
SMCO3-201ENST00000316048 HOXD13P35453 343 aa4.34□□□□□ -1.71
SMCO3-201ENST00000316048 MLH1P40692 756 aa4.34□□□□□ -1.71
SMCO3-201ENST00000316048 HADHAP40939 763 aa4.34□□□□□ -1.71
SMCO3-201ENST00000316048 EFNA5P52803 228 aa4.34□□□□□ -1.71
SMCO3-201ENST00000316048 RPS3AP61247 264 aaKnown RBP4.34□□□□□ -1.71
SMCO3-201ENST00000316048 ZBTB16Q05516 673 aa4.34□□□□□ -1.71
SMCO3-201ENST00000316048 FOXI1Q12951 378 aa4.34□□□□□ -1.71
SMCO3-201ENST00000316048 SLC14A1Q13336 389 aa4.34□□□□□ -1.71
SMCO3-201ENST00000316048 MPP3Q13368 585 aa4.34□□□□□ -1.71
SMCO3-201ENST00000316048 ALKBH1Q13686 389 aaKnown RBP4.34□□□□□ -1.71
SMCO3-201ENST00000316048 SLC9B1Q4ZJI4 515 aa4.34□□□□□ -1.71
SMCO3-201ENST00000316048 IGFL4Q6B9Z1 124 aa4.34□□□□□ -1.71
SMCO3-201ENST00000316048 CCDC129Q6ZRS4 1044 aa4.34□□□□□ -1.71
SMCO3-201ENST00000316048 GALNT5Q7Z7M9 940 aa4.34□□□□□ -1.71
SMCO3-201ENST00000316048 BRSK2Q8IWQ3 736 aa4.34□□□□□ -1.71
SMCO3-201ENST00000316048 EXD3Q8N9H8 876 aa4.34□□□□□ -1.71
SMCO3-201ENST00000316048 C1orf131Q8NDD1 294 aaKnown RBP4.34□□□□□ -1.71
SMCO3-201ENST00000316048 DVL3Q92997 716 aaPredicted RBP4.34□□□□□ -1.71
SMCO3-201ENST00000316048 ATP2A3Q93084 1043 aa4.34□□□□□ -1.71
SMCO3-201ENST00000316048 SH3KBP1Q96B97 665 aa4.34□□□□□ -1.71
SMCO3-201ENST00000316048 NR1H4Q96RI1 486 aaPredicted RBP4.34□□□□□ -1.71
SMCO3-201ENST00000316048 NUDT16L1Q9BRJ7 211 aaKnown RBP4.34□□□□□ -1.71
SMCO3-201ENST00000316048 SEPT11Q9NVA2 429 aaKnown RBP4.34□□□□□ -1.71
SMCO3-201ENST00000316048 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.34□□□□□ -1.71
SMCO3-201ENST00000316048 UPB1Q9UBR1 384 aa4.34□□□□□ -1.71
SMCO3-201ENST00000316048 ADD3Q9UEY8 706 aaKnown RBP4.34□□□□□ -1.71
SMCO3-201ENST00000316048 SLC25A13Q9UJS0 675 aa4.34□□□□□ -1.71
SMCO3-201ENST00000316048 MAST3O60307 1309 aa4.34□□□□□ -1.71
SMCO3-201ENST00000316048 KIF16BQ96L93 1317 aa4.34□□□□□ -1.71
SMCO3-201ENST00000316048 ARHGEF10O15013 1369 aa4.34□□□□□ -1.71
SMCO3-201ENST00000316048 A0A0U1RQG5 324 aaPredicted RBP4.34□□□□□ -1.71
SMCO3-201ENST00000316048 SNAP23O00161 211 aa4.34□□□□□ -1.71
SMCO3-201ENST00000316048 TSPAN4O14817 238 aa4.34□□□□□ -1.71
SMCO3-201ENST00000316048 HTATSF1O43719 755 aaKnown RBP4.34□□□□□ -1.71
SMCO3-201ENST00000316048 GUCY1B2O75343 617 aa4.34□□□□□ -1.71
SMCO3-201ENST00000316048 RFPL3SP0C7P2 107 aa4.34□□□□□ -1.71
SMCO3-201ENST00000316048 ZNF853P0CG23 659 aa4.34□□□□□ -1.71
SMCO3-201ENST00000316048 MYCLP12524 364 aaPredicted RBP4.34□□□□□ -1.71
SMCO3-201ENST00000316048 DRD4P21917 467 aa4.34□□□□□ -1.71
SMCO3-201ENST00000316048 HOXC9P31274 260 aa4.34□□□□□ -1.71
SMCO3-201ENST00000316048 GRIA3P42263 894 aa4.34□□□□□ -1.71
SMCO3-201ENST00000316048 TXKP42681 527 aa4.34□□□□□ -1.71
SMCO3-201ENST00000316048 CCT8P50990 548 aa4.34□□□□□ -1.71
SMCO3-201ENST00000316048 UFM1P61960 85 aa4.34□□□□□ -1.71
SMCO3-201ENST00000316048 TUBA3CQ13748 450 aa4.34□□□□□ -1.71
SMCO3-201ENST00000316048 PLAC9Q5JTB6 97 aa4.34□□□□□ -1.71
SMCO3-201ENST00000316048 TUBA3EQ6PEY2 450 aa4.34□□□□□ -1.71
SMCO3-201ENST00000316048 Q6YL49 198 aa4.34□□□□□ -1.71
SMCO3-201ENST00000316048 MDGA2Q7Z553 956 aa4.34□□□□□ -1.71
SMCO3-201ENST00000316048 WDR53Q7Z5U6 358 aaPredicted RBP4.34□□□□□ -1.71
SMCO3-201ENST00000316048 TFAP2DQ7Z6R9 452 aa4.34□□□□□ -1.71
SMCO3-201ENST00000316048 ARHGAP45Q92619 1136 aa4.34□□□□□ -1.71
SMCO3-201ENST00000316048 HS6ST2Q96MM7 605 aa4.34□□□□□ -1.71
SMCO3-201ENST00000316048 RWDD1Q9H446 243 aaPredicted RBP4.34□□□□□ -1.71
SMCO3-201ENST00000316048 ANKEF1Q9NU02 776 aa4.34□□□□□ -1.71
SMCO3-201ENST00000316048 SYBUQ9NX95 663 aa4.34□□□□□ -1.71
SMCO3-201ENST00000316048 TAS2R10Q9NYW0 307 aa4.34□□□□□ -1.71
SMCO3-201ENST00000316048 SEMA5BQ9P283 1151 aa4.34□□□□□ -1.71
SMCO3-201ENST00000316048 VPS28Q9UK41 221 aa4.34□□□□□ -1.71
SMCO3-201ENST00000316048 DDX19BQ9UMR2 479 aa4.34□□□□□ -1.71
SMCO3-201ENST00000316048 PKP3Q9Y446 797 aa4.34□□□□□ -1.71
SMCO3-201ENST00000316048 NALCNQ8IZF0 1738 aa4.34□□□□□ -1.72
SMCO3-201ENST00000316048 NCOA3Q9Y6Q9 1424 aa4.33□□□□□ -1.72
SMCO3-201ENST00000316048 AP3D1O14617 1153 aa4.33□□□□□ -1.72
SMCO3-201ENST00000316048 DSCR3O14972 297 aa4.33□□□□□ -1.72
SMCO3-201ENST00000316048 ADH4P08319 380 aa4.33□□□□□ -1.72
SMCO3-201ENST00000316048 PKMP14618 531 aaKnown RBP4.33□□□□□ -1.72
SMCO3-201ENST00000316048 ADRA1BP35368 520 aa4.33□□□□□ -1.72
SMCO3-201ENST00000316048 MPLP40238 635 aa4.33□□□□□ -1.72
SMCO3-201ENST00000316048 MTNR1AP48039 350 aa4.33□□□□□ -1.72
SMCO3-201ENST00000316048 ARF3P61204 181 aaPredicted RBP4.33□□□□□ -1.72
SMCO3-201ENST00000316048 ARF1P84077 181 aaKnown RBP4.33□□□□□ -1.72
SMCO3-201ENST00000316048 DMWDQ09019 674 aa4.33□□□□□ -1.72
SMCO3-201ENST00000316048 MVPQ14764 893 aaKnown RBP4.33□□□□□ -1.72
SMCO3-201ENST00000316048 KPNB1Q14974 876 aaKnown RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms