RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 USP13Q92995 863 aaPredicted RBP25.75■■□□□ 1.71
HOXB3-201ENST00000311626 SLC9A7Q96T83 725 aa25.75■■□□□ 1.71
HOXB3-201ENST00000311626 PTPN18Q99952 460 aa25.75■■□□□ 1.71
HOXB3-201ENST00000311626 C1QTNF1Q9BXJ1 281 aa25.75■■□□□ 1.71
HOXB3-201ENST00000311626 FIS1Q9Y3D6 152 aa25.75■■□□□ 1.71
HOXB3-201ENST00000311626 HHLA1C9JL84 531 aa25.75■■□□□ 1.71
HOXB3-201ENST00000311626 TIMM44O43615 452 aa25.75■■□□□ 1.71
HOXB3-201ENST00000311626 SCAPQ12770 1279 aa25.75■■□□□ 1.71
HOXB3-201ENST00000311626 ESRP1Q6NXG1 681 aaKnown RBP25.75■■□□□ 1.71
HOXB3-201ENST00000311626 AAGABQ6PD74 315 aa25.75■■□□□ 1.71
HOXB3-201ENST00000311626 TXNDC9O14530 226 aa25.74■■□□□ 1.71
HOXB3-201ENST00000311626 GLDCP23378 1020 aa25.74■■□□□ 1.71
HOXB3-201ENST00000311626 NUMBP49757 651 aa25.74■■□□□ 1.71
HOXB3-201ENST00000311626 CRYBB1P53674 252 aaPredicted RBP25.74■■□□□ 1.71
HOXB3-201ENST00000311626 BTKQ06187 659 aa25.74■■□□□ 1.71
HOXB3-201ENST00000311626 DLG1Q12959 904 aa25.74■■□□□ 1.71
HOXB3-201ENST00000311626 USP50Q70EL3 339 aaPredicted RBP25.74■■□□□ 1.71
HOXB3-201ENST00000311626 SCAMP5Q8TAC9 235 aa25.74■■□□□ 1.71
HOXB3-201ENST00000311626 EPAS1Q99814 870 aa25.74■■□□□ 1.71
HOXB3-201ENST00000311626 IL22Q9GZX6 179 aa25.74■■□□□ 1.71
HOXB3-201ENST00000311626 PRDM16Q9HAZ2 1276 aa25.74■■□□□ 1.71
HOXB3-201ENST00000311626 STX16-NPEPL1H3BU86 382 aa25.74■■□□□ 1.71
HOXB3-201ENST00000311626 SLC35E2BP0CK96 405 aa25.74■■□□□ 1.71
HOXB3-201ENST00000311626 MYL4P12829 197 aa25.74■■□□□ 1.71
HOXB3-201ENST00000311626 NPY2RP49146 381 aa25.74■■□□□ 1.71
HOXB3-201ENST00000311626 ANO4Q32M45 955 aa25.74■■□□□ 1.71
HOXB3-201ENST00000311626 NOMO2Q5JPE7 1267 aa25.74■■□□□ 1.71
HOXB3-201ENST00000311626 ITPRIPL1Q6GPH6 555 aa25.74■■□□□ 1.71
HOXB3-201ENST00000311626 RPS27LQ71UM5 84 aaKnown RBP25.74■■□□□ 1.71
HOXB3-201ENST00000311626 FSTL5Q8N475 847 aaPredicted RBP25.74■■□□□ 1.71
HOXB3-201ENST00000311626 NXNL1Q96CM4 212 aa25.74■■□□□ 1.71
HOXB3-201ENST00000311626 TMEM209Q96SK2 561 aa25.74■■□□□ 1.71
HOXB3-201ENST00000311626 FAM96AQ9H5X1 160 aa25.74■■□□□ 1.71
HOXB3-201ENST00000311626 CNGB3Q9NQW8 809 aa25.74■■□□□ 1.71
HOXB3-201ENST00000311626 NDFIP2Q9NV92 336 aa25.74■■□□□ 1.71
HOXB3-201ENST00000311626 GRID2O43424 1007 aa25.73■■□□□ 1.71
HOXB3-201ENST00000311626 FBXO21O94952 628 aa25.73■■□□□ 1.71
HOXB3-201ENST00000311626 TFEBP19484 476 aa25.73■■□□□ 1.71
HOXB3-201ENST00000311626 PGFP49763 221 aa25.73■■□□□ 1.71
HOXB3-201ENST00000311626 SCNN1GP51170 649 aa25.73■■□□□ 1.71
HOXB3-201ENST00000311626 CDH17Q12864 832 aa25.73■■□□□ 1.71
HOXB3-201ENST00000311626 GRAMD1BQ3KR37 738 aa25.73■■□□□ 1.71
HOXB3-201ENST00000311626 TMC7Q7Z402 723 aa25.73■■□□□ 1.71
HOXB3-201ENST00000311626 MCMBPQ9BTE3 642 aa25.73■■□□□ 1.71
HOXB3-201ENST00000311626 DNAJB4Q9UDY4 337 aa25.73■■□□□ 1.71
HOXB3-201ENST00000311626 H3BNX3 289 aa25.73■■□□□ 1.71
HOXB3-201ENST00000311626 MATN2O00339 956 aa25.73■■□□□ 1.71
HOXB3-201ENST00000311626 CENPLQ8N0S6 344 aaPredicted RBP25.73■■□□□ 1.71
HOXB3-201ENST00000311626 GTF3C2Q8WUA4 911 aaPredicted RBP25.73■■□□□ 1.71
HOXB3-201ENST00000311626 MYLPFQ96A32 169 aa25.73■■□□□ 1.71
HOXB3-201ENST00000311626 GBP5Q96PP8 586 aa25.73■■□□□ 1.71
HOXB3-201ENST00000311626 FICDQ9BVA6 458 aa25.73■■□□□ 1.71
HOXB3-201ENST00000311626 SUDS3Q9H7L9 328 aaPredicted RBP25.73■■□□□ 1.71
HOXB3-201ENST00000311626 TRHDEQ9UKU6 1024 aa25.73■■□□□ 1.71
HOXB3-201ENST00000311626 TMEM114B3SHH9 223 aa25.72■■□□□ 1.71
HOXB3-201ENST00000311626 PMPCBO75439 489 aa25.72■■□□□ 1.71
HOXB3-201ENST00000311626 PGK1P00558 417 aa25.72■■□□□ 1.71
HOXB3-201ENST00000311626 CHRNA4P43681 627 aa25.72■■□□□ 1.71
HOXB3-201ENST00000311626 RPL14P50914 215 aaKnown RBP25.72■■□□□ 1.71
HOXB3-201ENST00000311626 SEL1L3Q68CR1 1132 aa25.72■■□□□ 1.71
HOXB3-201ENST00000311626 RCN3Q96D15 328 aa25.72■■□□□ 1.71
HOXB3-201ENST00000311626 CDRT15Q96T59 188 aa25.72■■□□□ 1.71
HOXB3-201ENST00000311626 GPR22Q99680 433 aa25.72■■□□□ 1.71
HOXB3-201ENST00000311626 KLHL4Q9C0H6 718 aa25.72■■□□□ 1.71
HOXB3-201ENST00000311626 TMLHEQ9NVH6 421 aa25.72■■□□□ 1.71
HOXB3-201ENST00000311626 XPR1Q9UBH6 696 aa25.72■■□□□ 1.71
HOXB3-201ENST00000311626 NEMP2A6NFY4 417 aa25.72■■□□□ 1.71
HOXB3-201ENST00000311626 AURKAO14965 403 aa25.72■■□□□ 1.71
HOXB3-201ENST00000311626 NCAM2O15394 837 aa25.72■■□□□ 1.71
HOXB3-201ENST00000311626 MSI1O43347 362 aaKnown RBP25.72■■□□□ 1.71
HOXB3-201ENST00000311626 CXCR3P49682 368 aa25.72■■□□□ 1.71
HOXB3-201ENST00000311626 MTTPP55157 894 aa25.72■■□□□ 1.71
HOXB3-201ENST00000311626 RAB41Q5JT25 222 aa25.72■■□□□ 1.71
HOXB3-201ENST00000311626 ZYG11AQ6WRX3 759 aa25.72■■□□□ 1.71
HOXB3-201ENST00000311626 LSMEM2Q8N112 164 aa25.72■■□□□ 1.71
HOXB3-201ENST00000311626 PPP2R3CQ969Q6 453 aa25.72■■□□□ 1.71
HOXB3-201ENST00000311626 NR1H4Q96RI1 486 aaPredicted RBP25.72■■□□□ 1.71
HOXB3-201ENST00000311626 RTKNQ9BST9 563 aa25.72■■□□□ 1.71
HOXB3-201ENST00000311626 PAPOLBQ9NRJ5 636 aaKnown RBP25.72■■□□□ 1.71
HOXB3-201ENST00000311626 C17orf102A2RUQ5 167 aa25.71■■□□□ 1.71
HOXB3-201ENST00000311626 DLX3O60479 287 aa25.71■■□□□ 1.71
HOXB3-201ENST00000311626 CSE1LP55060 971 aaKnown RBP25.71■■□□□ 1.71
HOXB3-201ENST00000311626 TIGD5Q53EQ6 642 aa25.71■■□□□ 1.71
HOXB3-201ENST00000311626 LIPMQ5VYY2 423 aa25.71■■□□□ 1.71
HOXB3-201ENST00000311626 SFMBT1Q9UHJ3 866 aa25.71■■□□□ 1.71
HOXB3-201ENST00000311626 ENO3P13929 434 aaPredicted RBP25.71■■□□□ 1.71
HOXB3-201ENST00000311626 BRCC3P46736 316 aa25.71■■□□□ 1.71
HOXB3-201ENST00000311626 GSTA3Q16772 222 aa25.71■■□□□ 1.71
HOXB3-201ENST00000311626 RNF135Q8IUD6 432 aa25.71■■□□□ 1.71
HOXB3-201ENST00000311626 SREK1Q8WXA9 508 aaKnown RBP25.71■■□□□ 1.71
HOXB3-201ENST00000311626 GCNAQ96QF7 691 aa25.71■■□□□ 1.71
HOXB3-201ENST00000311626 DRC3Q9H069 523 aa25.71■■□□□ 1.71
HOXB3-201ENST00000311626 RAP2CQ9Y3L5 183 aa25.71■■□□□ 1.71
HOXB3-201ENST00000311626 CAPN8A6NHC0 703 aa25.7■■□□□ 1.71
HOXB3-201ENST00000311626 HDAC3O15379 428 aa25.7■■□□□ 1.71
HOXB3-201ENST00000311626 HCAR3P49019 387 aa25.7■■□□□ 1.71
HOXB3-201ENST00000311626 THOP1P52888 689 aa25.7■■□□□ 1.71
HOXB3-201ENST00000311626 PRPSAP1Q14558 356 aa25.7■■□□□ 1.71
HOXB3-201ENST00000311626 PCBP1Q15365 356 aaKnown RBP eCLIP25.7■■□□□ 1.71
HOXB3-201ENST00000311626 DSELQ8IZU8 1212 aa25.7■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms