RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 GRIK3Q13003 919 aa11.73□□□□□ -0.53
PTPN2-201ENST00000309660 SLC9B1Q4ZJI4 515 aa11.73□□□□□ -0.53
PTPN2-201ENST00000309660 ELMO2Q96JJ3 720 aa11.73□□□□□ -0.53
PTPN2-201ENST00000309660 GATA5Q9BWX5 397 aaPredicted RBP11.73□□□□□ -0.53
PTPN2-201ENST00000309660 TRPV6Q9H1D0 765 aa11.73□□□□□ -0.53
PTPN2-201ENST00000309660 CATSPERBQ9H7T0 1116 aa11.73□□□□□ -0.53
PTPN2-201ENST00000309660 NT5MQ9NPB1 228 aa11.73□□□□□ -0.53
PTPN2-201ENST00000309660 AAR2Q9Y312 384 aaKnown RBP11.73□□□□□ -0.53
PTPN2-201ENST00000309660 B4GALT3O60512 393 aa11.73□□□□□ -0.53
PTPN2-201ENST00000309660 KPNA6O60684 536 aa11.73□□□□□ -0.53
PTPN2-201ENST00000309660 HLA-DQB2P05538 268 aa11.73□□□□□ -0.53
PTPN2-201ENST00000309660 CYBAP13498 195 aa11.73□□□□□ -0.53
PTPN2-201ENST00000309660 EPHA3P29320 983 aa11.73□□□□□ -0.53
PTPN2-201ENST00000309660 PAPOLAP51003 745 aaKnown RBP11.73□□□□□ -0.53
PTPN2-201ENST00000309660 IL31Q6EBC2 164 aa11.73□□□□□ -0.53
PTPN2-201ENST00000309660 PM20D1Q6GTS8 502 aa11.73□□□□□ -0.53
PTPN2-201ENST00000309660 FAM171BQ6P995 826 aa11.73□□□□□ -0.53
PTPN2-201ENST00000309660 GLB1LQ6UWU2 654 aa11.73□□□□□ -0.53
PTPN2-201ENST00000309660 ATAD1Q8NBU5 361 aa11.73□□□□□ -0.53
PTPN2-201ENST00000309660 PPFIBP2Q8ND30 876 aa11.73□□□□□ -0.53
PTPN2-201ENST00000309660 MARK4Q96L34 752 aa11.73□□□□□ -0.53
PTPN2-201ENST00000309660 OSBPL1AQ9BXW6 950 aa11.73□□□□□ -0.53
PTPN2-201ENST00000309660 NUF2Q9BZD4 464 aa11.73□□□□□ -0.53
PTPN2-201ENST00000309660 BRD8Q9H0E9 1235 aa11.73□□□□□ -0.53
PTPN2-201ENST00000309660 GLOD4Q9HC38 313 aa11.73□□□□□ -0.53
PTPN2-201ENST00000309660 CBLBQ13191 982 aa11.72□□□□□ -0.53
PTPN2-201ENST00000309660 PDCD2Q16342 344 aaPredicted RBP11.72□□□□□ -0.53
PTPN2-201ENST00000309660 ANO4Q32M45 955 aa11.72□□□□□ -0.53
PTPN2-201ENST00000309660 DNAL1Q4LDG9 190 aa11.72□□□□□ -0.53
PTPN2-201ENST00000309660 TCHHL1Q5QJ38 904 aaPredicted RBP11.72□□□□□ -0.53
PTPN2-201ENST00000309660 LINC00523Q86TU6 105 aa11.72□□□□□ -0.53
PTPN2-201ENST00000309660 ARHGAP12Q8IWW6 846 aa11.72□□□□□ -0.53
PTPN2-201ENST00000309660 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.72□□□□□ -0.53
PTPN2-201ENST00000309660 TTC9BQ8N6N2 239 aa11.72□□□□□ -0.53
PTPN2-201ENST00000309660 PPHLN1Q8NEY8 458 aaKnown RBP11.72□□□□□ -0.53
PTPN2-201ENST00000309660 MAPK15Q8TD08 544 aa11.72□□□□□ -0.53
PTPN2-201ENST00000309660 SCG3Q8WXD2 468 aaKnown RBP11.72□□□□□ -0.53
PTPN2-201ENST00000309660 FAM136AQ96C01 138 aa11.72□□□□□ -0.53
PTPN2-201ENST00000309660 PPP1R12CQ9BZL4 782 aa11.72□□□□□ -0.53
PTPN2-201ENST00000309660 CYP4F12Q9HCS2 524 aa11.72□□□□□ -0.53
PTPN2-201ENST00000309660 IPO11Q9UI26 975 aaKnown RBP11.72□□□□□ -0.53
PTPN2-201ENST00000309660 MAGEB16A2A368 324 aa11.72□□□□□ -0.53
PTPN2-201ENST00000309660 E9PAM4 449 aa11.72□□□□□ -0.53
PTPN2-201ENST00000309660 BUD23O43709 281 aaKnown RBP11.72□□□□□ -0.53
PTPN2-201ENST00000309660 PRKAR2AP13861 404 aaKnown RBP11.72□□□□□ -0.53
PTPN2-201ENST00000309660 GRIA4P48058 902 aa11.72□□□□□ -0.53
PTPN2-201ENST00000309660 ITGA7Q13683 1181 aa11.72□□□□□ -0.53
PTPN2-201ENST00000309660 INSCQ1MX18 579 aa11.72□□□□□ -0.53
PTPN2-201ENST00000309660 LRRC74BQ6ZQY2 392 aa11.72□□□□□ -0.53
PTPN2-201ENST00000309660 SCD5Q86SK9 330 aa11.72□□□□□ -0.53
PTPN2-201ENST00000309660 LDB1Q86U70 411 aaPredicted RBP11.72□□□□□ -0.53
PTPN2-201ENST00000309660 SAPCD2Q86UD0 394 aa11.72□□□□□ -0.53
PTPN2-201ENST00000309660 ZC3HC1Q86WB0 502 aaKnown RBP11.72□□□□□ -0.53
PTPN2-201ENST00000309660 CIR1Q86X95 450 aaPredicted RBP11.72□□□□□ -0.53
PTPN2-201ENST00000309660 TTC16Q8NEE8 873 aa11.72□□□□□ -0.53
PTPN2-201ENST00000309660 SLC26A7Q8TE54 656 aa11.72□□□□□ -0.53
PTPN2-201ENST00000309660 FAM193BQ96PV7 902 aaPredicted RBP11.72□□□□□ -0.53
PTPN2-201ENST00000309660 OR52B2Q96RD2 323 aa11.72□□□□□ -0.53
PTPN2-201ENST00000309660 XPR1Q9UBH6 696 aa11.72□□□□□ -0.53
PTPN2-201ENST00000309660 RAD54BQ9Y620 910 aa11.72□□□□□ -0.53
PTPN2-201ENST00000309660 CDY1Q9Y6F8 540 aa11.72□□□□□ -0.53
PTPN2-201ENST00000309660 G3V2L1 256 aa11.72□□□□□ -0.53
PTPN2-201ENST00000309660 AIM2O14862 343 aa11.72□□□□□ -0.53
PTPN2-201ENST00000309660 AURKAO14965 403 aa11.72□□□□□ -0.53
PTPN2-201ENST00000309660 SEPT4O43236 478 aa11.72□□□□□ -0.53
PTPN2-201ENST00000309660 MAFKO60675 156 aa11.72□□□□□ -0.53
PTPN2-201ENST00000309660 ANXA9O76027 345 aa11.72□□□□□ -0.53
PTPN2-201ENST00000309660 PIGNO95427 931 aa11.72□□□□□ -0.53
PTPN2-201ENST00000309660 MPOP05164 745 aa11.72□□□□□ -0.53
PTPN2-201ENST00000309660 VHLP40337 213 aa11.72□□□□□ -0.53
PTPN2-201ENST00000309660 PLK1P53350 603 aa11.72□□□□□ -0.53
PTPN2-201ENST00000309660 ATXN3P54252 364 aaPredicted RBP11.72□□□□□ -0.53
PTPN2-201ENST00000309660 FCGRTP55899 365 aa11.72□□□□□ -0.53
PTPN2-201ENST00000309660 SLC34A1Q06495 639 aa11.72□□□□□ -0.53
PTPN2-201ENST00000309660 MAPRE1Q15691 268 aaKnown RBP11.72□□□□□ -0.53
PTPN2-201ENST00000309660 PSMD5Q16401 504 aa11.72□□□□□ -0.53
PTPN2-201ENST00000309660 PKN3Q6P5Z2 889 aa11.72□□□□□ -0.53
PTPN2-201ENST00000309660 DEFB107AQ8IZN7 70 aa11.72□□□□□ -0.53
PTPN2-201ENST00000309660 ENDOVQ8N8Q3 282 aaKnown RBP11.72□□□□□ -0.53
PTPN2-201ENST00000309660 OR6P1Q8NGX9 317 aa11.72□□□□□ -0.53
PTPN2-201ENST00000309660 NRG4Q8WWG1 115 aa11.72□□□□□ -0.53
PTPN2-201ENST00000309660 PYDC1Q8WXC3 89 aa11.72□□□□□ -0.53
PTPN2-201ENST00000309660 IRGQQ8WZA9 623 aa11.72□□□□□ -0.53
PTPN2-201ENST00000309660 PANX3Q96QZ0 392 aa11.72□□□□□ -0.53
PTPN2-201ENST00000309660 OSER1Q9NX31 292 aa11.72□□□□□ -0.53
PTPN2-201ENST00000309660 DNAJB4Q9UDY4 337 aa11.72□□□□□ -0.53
PTPN2-201ENST00000309660 ADAM28Q9UKQ2 775 aa11.72□□□□□ -0.53
PTPN2-201ENST00000309660 DSEQ9UL01 958 aa11.72□□□□□ -0.53
PTPN2-201ENST00000309660 SLC27A5Q9Y2P5 690 aa11.72□□□□□ -0.53
PTPN2-201ENST00000309660 HS3ST4Q9Y661 456 aa11.72□□□□□ -0.53
PTPN2-201ENST00000309660 SCN4AP35499 1836 aa11.71□□□□□ -0.53
PTPN2-201ENST00000309660 FAM95CA0A1B0GW59 222 aa11.71□□□□□ -0.53
PTPN2-201ENST00000309660 TM7SF2O76062 418 aa11.71□□□□□ -0.53
PTPN2-201ENST00000309660 DDHD2O94830 711 aa11.71□□□□□ -0.53
PTPN2-201ENST00000309660 KLHL2O95198 593 aa11.71□□□□□ -0.53
PTPN2-201ENST00000309660 MYCP01106 439 aaPredicted RBP11.71□□□□□ -0.53
PTPN2-201ENST00000309660 FAM163BP0C2L3 166 aa11.71□□□□□ -0.53
PTPN2-201ENST00000309660 GABRB3P28472 473 aa11.71□□□□□ -0.53
PTPN2-201ENST00000309660 RAB27AP51159 221 aa11.71□□□□□ -0.53
PTPN2-201ENST00000309660 PCID2Q5JVF3 399 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms