RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 NAXDQ8IW45 347 aa20.25■□□□□ 0.83
PDZRN3-202ENST00000308537 TMIEQ8NEW7 156 aa20.25■□□□□ 0.83
PDZRN3-202ENST00000308537 EDEM3Q9BZQ6 932 aa20.25■□□□□ 0.83
PDZRN3-202ENST00000308537 TRIM7Q9C029 511 aa20.25■□□□□ 0.83
PDZRN3-202ENST00000308537 TNKS2Q9H2K2 1166 aa20.25■□□□□ 0.83
PDZRN3-202ENST00000308537 SLC32A1Q9H598 525 aa20.25■□□□□ 0.83
PDZRN3-202ENST00000308537 ATP13A1Q9HD20 1204 aa20.25■□□□□ 0.83
PDZRN3-202ENST00000308537 TM7SF3Q9NS93 570 aa20.25■□□□□ 0.83
PDZRN3-202ENST00000308537 FZD10Q9ULW2 581 aa20.25■□□□□ 0.83
PDZRN3-202ENST00000308537 TRPM6Q9BX84 2022 aa20.25■□□□□ 0.83
PDZRN3-202ENST00000308537 KCNK3O14649 394 aa20.24■□□□□ 0.83
PDZRN3-202ENST00000308537 VILLO15195 856 aa20.24■□□□□ 0.83
PDZRN3-202ENST00000308537 CER1O95813 267 aa20.24■□□□□ 0.83
PDZRN3-202ENST00000308537 GZMAP12544 262 aa20.24■□□□□ 0.83
PDZRN3-202ENST00000308537 PTMSP20962 102 aa20.24■□□□□ 0.83
PDZRN3-202ENST00000308537 TNFAIP3P21580 790 aa20.24■□□□□ 0.83
PDZRN3-202ENST00000308537 ASIC2Q16515 512 aa20.24■□□□□ 0.83
PDZRN3-202ENST00000308537 FILIP1LQ4L180 1135 aa20.24■□□□□ 0.83
PDZRN3-202ENST00000308537 FAM46CQ5VWP2 391 aa20.24■□□□□ 0.83
PDZRN3-202ENST00000308537 CYP4V2Q6ZWL3 525 aaPredicted RBP20.24■□□□□ 0.83
PDZRN3-202ENST00000308537 SLFN11Q7Z7L1 901 aa20.24■□□□□ 0.83
PDZRN3-202ENST00000308537 TBC1D31Q96DN5 1066 aa20.24■□□□□ 0.83
PDZRN3-202ENST00000308537 SPON2Q9BUD6 331 aa20.24■□□□□ 0.83
PDZRN3-202ENST00000308537 CEP44Q9C0F1 390 aa20.24■□□□□ 0.83
PDZRN3-202ENST00000308537 KDM4CQ9H3R0 1056 aa20.24■□□□□ 0.83
PDZRN3-202ENST00000308537 DNAI1Q9UI46 699 aa20.24■□□□□ 0.83
PDZRN3-202ENST00000308537 PCOLCE2Q9UKZ9 415 aa20.24■□□□□ 0.83
PDZRN3-202ENST00000308537 PCDHGB2Q9Y5G2 931 aa20.24■□□□□ 0.83
PDZRN3-202ENST00000308537 TMCO5BA8MYB1 307 aa20.23■□□□□ 0.83
PDZRN3-202ENST00000308537 C1QTNF3-AMACRE9PGA6 284 aa20.23■□□□□ 0.83
PDZRN3-202ENST00000308537 H0Y8X5 98 aa20.23■□□□□ 0.83
PDZRN3-202ENST00000308537 BNIP3LO60238 219 aa20.23■□□□□ 0.83
PDZRN3-202ENST00000308537 SPINK2P20155 84 aa20.23■□□□□ 0.83
PDZRN3-202ENST00000308537 SIM1P81133 766 aaPredicted RBP20.23■□□□□ 0.83
PDZRN3-202ENST00000308537 FANCCQ00597 558 aa20.23■□□□□ 0.83
PDZRN3-202ENST00000308537 SLC20A2Q08357 652 aa20.23■□□□□ 0.83
PDZRN3-202ENST00000308537 SHBQ15464 509 aa20.23■□□□□ 0.83
PDZRN3-202ENST00000308537 RWDD4Q6NW29 188 aaKnown RBP20.23■□□□□ 0.83
PDZRN3-202ENST00000308537 TRIM69Q86WT6 500 aa20.23■□□□□ 0.83
PDZRN3-202ENST00000308537 PEBP4Q96S96 227 aa20.23■□□□□ 0.83
PDZRN3-202ENST00000308537 KLC2Q9H0B6 622 aa20.23■□□□□ 0.83
PDZRN3-202ENST00000308537 BTBD3Q9Y2F9 522 aa20.23■□□□□ 0.83
PDZRN3-202ENST00000308537 FCF1Q9Y324 198 aaKnown RBP20.23■□□□□ 0.83
PDZRN3-202ENST00000308537 TMEM191CA6NGB0 347 aa20.22■□□□□ 0.83
PDZRN3-202ENST00000308537 WASH4PA8MWX3 477 aa20.22■□□□□ 0.83
PDZRN3-202ENST00000308537 SKILP12757 684 aa20.22■□□□□ 0.83
PDZRN3-202ENST00000308537 FOXC1Q12948 553 aa20.22■□□□□ 0.83
PDZRN3-202ENST00000308537 TEAD4Q15561 434 aa20.22■□□□□ 0.83
PDZRN3-202ENST00000308537 SFMBT2Q5VUG0 894 aa20.22■□□□□ 0.83
PDZRN3-202ENST00000308537 RETSATQ6NUM9 610 aa20.22■□□□□ 0.83
PDZRN3-202ENST00000308537 TMC6Q7Z403 805 aa20.22■□□□□ 0.83
PDZRN3-202ENST00000308537 GLRX5Q86SX6 157 aa20.22■□□□□ 0.83
PDZRN3-202ENST00000308537 PCDH20Q8N6Y1 951 aaKnown RBP20.22■□□□□ 0.83
PDZRN3-202ENST00000308537 RTL3Q8N8U3 475 aaKnown RBP20.22■□□□□ 0.83
PDZRN3-202ENST00000308537 MAGEH1Q9H213 219 aa20.22■□□□□ 0.83
PDZRN3-202ENST00000308537 TOR4AQ9NXH8 423 aa20.22■□□□□ 0.83
PDZRN3-202ENST00000308537 TPX2Q9ULW0 747 aaKnown RBP20.22■□□□□ 0.83
PDZRN3-202ENST00000308537 PLXNB3Q9ULL4 1909 aa20.21■□□□□ 0.83
PDZRN3-202ENST00000308537 PTPRBP23467 1997 aa20.21■□□□□ 0.83
PDZRN3-202ENST00000308537 TBC1D3DA0A087WVF3 549 aa20.21■□□□□ 0.83
PDZRN3-202ENST00000308537 TBC1D3IA0A087WXS9 549 aa20.21■□□□□ 0.83
PDZRN3-202ENST00000308537 TBC1D3EA0A087X179 549 aa20.21■□□□□ 0.83
PDZRN3-202ENST00000308537 TBC1D3KA0A087X1G2 549 aa20.21■□□□□ 0.83
PDZRN3-202ENST00000308537 TBC1D3FA6NER0 549 aaPredicted RBP20.21■□□□□ 0.83
PDZRN3-202ENST00000308537 TBC1D3LB9A6J9 549 aa20.21■□□□□ 0.83
PDZRN3-202ENST00000308537 LEFTY1O75610 366 aa20.21■□□□□ 0.83
PDZRN3-202ENST00000308537 TBC1D3HP0C7X1 549 aa20.21■□□□□ 0.83
PDZRN3-202ENST00000308537 AIF1P55008 147 aa20.21■□□□□ 0.83
PDZRN3-202ENST00000308537 CA9Q16790 459 aa20.21■□□□□ 0.83
PDZRN3-202ENST00000308537 ARSIQ5FYB1 569 aa20.21■□□□□ 0.83
PDZRN3-202ENST00000308537 TBC1D3GQ6DHY5 549 aa20.21■□□□□ 0.83
PDZRN3-202ENST00000308537 TBC1D3CQ6IPX1 549 aa20.21■□□□□ 0.83
PDZRN3-202ENST00000308537 LRSAM1Q6UWE0 723 aa20.21■□□□□ 0.83
PDZRN3-202ENST00000308537 PLPP6Q8IY26 295 aa20.21■□□□□ 0.83
PDZRN3-202ENST00000308537 TBC1D3Q8IZP1 549 aaPredicted RBP20.21■□□□□ 0.83
PDZRN3-202ENST00000308537 GRIN3AQ8TCU5 1115 aa20.21■□□□□ 0.83
PDZRN3-202ENST00000308537 ISG20Q96AZ6 181 aaKnown RBP20.21■□□□□ 0.83
PDZRN3-202ENST00000308537 HDAC8Q9BY41 377 aa20.21■□□□□ 0.83
PDZRN3-202ENST00000308537 ISCUQ9H1K1 167 aa20.21■□□□□ 0.83
PDZRN3-202ENST00000308537 IL36AQ9UHA7 158 aa20.21■□□□□ 0.83
PDZRN3-202ENST00000308537 A0A1B0GTQ1 180 aa20.2■□□□□ 0.82
PDZRN3-202ENST00000308537 A0A1W2PQJ5 194 aa20.2■□□□□ 0.82
PDZRN3-202ENST00000308537 KPNA3O00505 521 aaPredicted RBP20.2■□□□□ 0.82
PDZRN3-202ENST00000308537 PCDHGA12O60330 932 aa20.2■□□□□ 0.82
PDZRN3-202ENST00000308537 RAMP2O60895 175 aa20.2■□□□□ 0.82
PDZRN3-202ENST00000308537 DKK1O94907 266 aa20.2■□□□□ 0.82
PDZRN3-202ENST00000308537 SERPINC1P01008 464 aa20.2■□□□□ 0.82
PDZRN3-202ENST00000308537 FTLP02792 175 aaPredicted RBP20.2■□□□□ 0.82
PDZRN3-202ENST00000308537 PRNPP04156 253 aa20.2■□□□□ 0.82
PDZRN3-202ENST00000308537 CD38P28907 300 aa20.2■□□□□ 0.82
PDZRN3-202ENST00000308537 CCNHP51946 323 aaPredicted RBP20.2■□□□□ 0.82
PDZRN3-202ENST00000308537 HNRNPDQ14103 355 aaKnown RBP20.2■□□□□ 0.82
PDZRN3-202ENST00000308537 TRIP6Q15654 476 aaKnown RBP20.2■□□□□ 0.82
PDZRN3-202ENST00000308537 ZSCAN23Q3MJ62 389 aa20.2■□□□□ 0.82
PDZRN3-202ENST00000308537 CARD16Q5EG05 197 aa20.2■□□□□ 0.82
PDZRN3-202ENST00000308537 EFHC2Q5JST6 749 aa20.2■□□□□ 0.82
PDZRN3-202ENST00000308537 PRAMEF14Q5SWL7 426 aa20.2■□□□□ 0.82
PDZRN3-202ENST00000308537 NAPEPLDQ6IQ20 393 aa20.2■□□□□ 0.82
PDZRN3-202ENST00000308537 PPP1R2P3Q6NXS1 205 aa20.2■□□□□ 0.82
PDZRN3-202ENST00000308537 SCYL2Q6P3W7 929 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms