RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 APOL4Q9BPW4 351 aa12.79□□□□□ -0.36
USP38-201ENST00000307017 PRMT7Q9NVM4 692 aaPredicted RBP12.79□□□□□ -0.36
USP38-201ENST00000307017 THAP1Q9NVV9 213 aa12.79□□□□□ -0.36
USP38-201ENST00000307017 GMPPBQ9Y5P6 360 aa12.79□□□□□ -0.36
USP38-201ENST00000307017 FAM149AA5PLN7 773 aa12.79□□□□□ -0.36
USP38-201ENST00000307017 MIPP30301 263 aa12.79□□□□□ -0.36
USP38-201ENST00000307017 KPNA1P52294 538 aaPredicted RBP12.79□□□□□ -0.36
USP38-201ENST00000307017 EXOC3L1Q86VI1 746 aa12.79□□□□□ -0.36
USP38-201ENST00000307017 ADGRE3Q9BY15 652 aa12.79□□□□□ -0.36
USP38-201ENST00000307017 ATP13A1Q9HD20 1204 aa12.79□□□□□ -0.36
USP38-201ENST00000307017 BLOC1S4Q9NUP1 217 aa12.79□□□□□ -0.36
USP38-201ENST00000307017 GALNT8Q9NY28 637 aa12.79□□□□□ -0.36
USP38-201ENST00000307017 BTBD3Q9Y2F9 522 aa12.79□□□□□ -0.36
USP38-201ENST00000307017 BCLAF3A2AJT9 711 aaKnown RBP12.79□□□□□ -0.36
USP38-201ENST00000307017 EPN2O95208 641 aa12.79□□□□□ -0.36
USP38-201ENST00000307017 THP07101 528 aa12.79□□□□□ -0.36
USP38-201ENST00000307017 PTNP21246 168 aa12.79□□□□□ -0.36
USP38-201ENST00000307017 AZGP1P25311 298 aaKnown RBP12.79□□□□□ -0.36
USP38-201ENST00000307017 CPT1AP50416 773 aa12.79□□□□□ -0.36
USP38-201ENST00000307017 EVX2Q03828 476 aa12.79□□□□□ -0.36
USP38-201ENST00000307017 MGAT5Q09328 741 aa12.79□□□□□ -0.36
USP38-201ENST00000307017 RGS21Q2M5E4 152 aa12.79□□□□□ -0.36
USP38-201ENST00000307017 TXNRD3Q86VQ6 643 aa12.79□□□□□ -0.36
USP38-201ENST00000307017 CFAP52Q8N1V2 620 aa12.79□□□□□ -0.36
USP38-201ENST00000307017 HNRNPLLQ8WVV9 542 aaKnown RBP12.79□□□□□ -0.36
USP38-201ENST00000307017 ATAD3AQ9NVI7 634 aa12.79□□□□□ -0.36
USP38-201ENST00000307017 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.79□□□□□ -0.36
USP38-201ENST00000307017 SLC12A4Q9UP95 1085 aa12.79□□□□□ -0.36
USP38-201ENST00000307017 KPNA3O00505 521 aaPredicted RBP12.79□□□□□ -0.36
USP38-201ENST00000307017 ARF3P61204 181 aaPredicted RBP12.79□□□□□ -0.36
USP38-201ENST00000307017 ARF1P84077 181 aaKnown RBP12.79□□□□□ -0.36
USP38-201ENST00000307017 MARC1Q5VT66 337 aa12.79□□□□□ -0.36
USP38-201ENST00000307017 TIGD7Q6NT04 549 aaPredicted RBP12.79□□□□□ -0.36
USP38-201ENST00000307017 ZNF677Q86XU0 584 aa12.79□□□□□ -0.36
USP38-201ENST00000307017 FUKQ8N0W3 1084 aa12.79□□□□□ -0.36
USP38-201ENST00000307017 OR10G6Q8NH81 332 aa12.79□□□□□ -0.36
USP38-201ENST00000307017 PROX1Q92786 737 aa12.79□□□□□ -0.36
USP38-201ENST00000307017 TBC1D10AQ9BXI6 508 aa12.79□□□□□ -0.36
USP38-201ENST00000307017 SLC17A7Q9P2U7 560 aa12.79□□□□□ -0.36
USP38-201ENST00000307017 POLLQ9UGP5 575 aa12.79□□□□□ -0.36
USP38-201ENST00000307017 VAV3Q9UKW4 847 aa12.79□□□□□ -0.36
USP38-201ENST00000307017 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.79□□□□□ -0.36
USP38-201ENST00000307017 SAMD9LQ8IVG5 1584 aa12.79□□□□□ -0.36
USP38-201ENST00000307017 FKBP6O75344 327 aa12.78□□□□□ -0.36
USP38-201ENST00000307017 SERPINE1P05121 402 aa12.78□□□□□ -0.36
USP38-201ENST00000307017 PTPN11Q06124 597 aaPredicted RBP12.78□□□□□ -0.36
USP38-201ENST00000307017 ITPK1Q13572 414 aa12.78□□□□□ -0.36
USP38-201ENST00000307017 CBFBQ13951 182 aa12.78□□□□□ -0.36
USP38-201ENST00000307017 TRMT5Q32P41 509 aaKnown RBP12.78□□□□□ -0.36
USP38-201ENST00000307017 ARMC5Q96C12 935 aa12.78□□□□□ -0.36
USP38-201ENST00000307017 SLC4A9Q96Q91 983 aa12.78□□□□□ -0.36
USP38-201ENST00000307017 HBEGFQ99075 208 aa12.78□□□□□ -0.36
USP38-201ENST00000307017 LRRC4BQ9NT99 713 aa12.78□□□□□ -0.36
USP38-201ENST00000307017 PLAGL2Q9UPG8 496 aa12.78□□□□□ -0.36
USP38-201ENST00000307017 NPHP4O75161 1426 aaPredicted RBP12.78□□□□□ -0.36
USP38-201ENST00000307017 KPNA5O15131 536 aa12.78□□□□□ -0.36
USP38-201ENST00000307017 RECQL5O94762 991 aaPredicted RBP12.78□□□□□ -0.36
USP38-201ENST00000307017 FBXO21O94952 628 aa12.78□□□□□ -0.36
USP38-201ENST00000307017 TNFSF9P41273 254 aa12.78□□□□□ -0.36
USP38-201ENST00000307017 HUNKP57058 714 aa12.78□□□□□ -0.36
USP38-201ENST00000307017 MSLNQ13421 630 aaPredicted RBP12.78□□□□□ -0.36
USP38-201ENST00000307017 DPYSL3Q14195 570 aa12.78□□□□□ -0.36
USP38-201ENST00000307017 NAXEQ8NCW5 288 aa12.78□□□□□ -0.36
USP38-201ENST00000307017 EXO5Q9H790 373 aa12.78□□□□□ -0.36
USP38-201ENST00000307017 SPACA6W5XKT8 324 aa12.78□□□□□ -0.36
USP38-201ENST00000307017 NEO1Q92859 1461 aa12.78□□□□□ -0.36
USP38-201ENST00000307017 GLI2P10070 1586 aa12.78□□□□□ -0.36
USP38-201ENST00000307017 CPSF4LA6NMK7 179 aaKnown RBP12.78□□□□□ -0.36
USP38-201ENST00000307017 MAPK1P28482 360 aa12.78□□□□□ -0.36
USP38-201ENST00000307017 BUD31P41223 144 aaPredicted RBP12.78□□□□□ -0.36
USP38-201ENST00000307017 PPP2R2BQ00005 443 aa12.78□□□□□ -0.36
USP38-201ENST00000307017 STILQ15468 1287 aa12.78□□□□□ -0.36
USP38-201ENST00000307017 FAM131AQ6UXB0 335 aa12.78□□□□□ -0.36
USP38-201ENST00000307017 EIF3MQ7L2H7 374 aaKnown RBP12.78□□□□□ -0.36
USP38-201ENST00000307017 ZNF720Q7Z2F6 126 aa12.78□□□□□ -0.36
USP38-201ENST00000307017 SPPL2CQ8IUH8 684 aa12.78□□□□□ -0.36
USP38-201ENST00000307017 CDYL2Q8N8U2 506 aa12.78□□□□□ -0.36
USP38-201ENST00000307017 PPP1R14BQ96C90 147 aa12.78□□□□□ -0.36
USP38-201ENST00000307017 SLC47A1Q96FL8 570 aa12.78□□□□□ -0.36
USP38-201ENST00000307017 CGRRF1Q99675 332 aa12.78□□□□□ -0.36
USP38-201ENST00000307017 TBC1D24Q9ULP9 559 aa12.78□□□□□ -0.36
USP38-201ENST00000307017 SNTNA6NMZ2 147 aa12.78□□□□□ -0.36
USP38-201ENST00000307017 DBIP07108 87 aaKnown RBP12.78□□□□□ -0.36
USP38-201ENST00000307017 POU2F1P14859 743 aa12.78□□□□□ -0.36
USP38-201ENST00000307017 NEK3P51956 506 aa12.78□□□□□ -0.36
USP38-201ENST00000307017 TBX4P57082 545 aa12.78□□□□□ -0.36
USP38-201ENST00000307017 TTC39CQ8N584 583 aa12.78□□□□□ -0.36
USP38-201ENST00000307017 REEP1Q9H902 201 aa12.78□□□□□ -0.36
USP38-201ENST00000307017 ETNK2Q9NVF9 386 aa12.78□□□□□ -0.36
USP38-201ENST00000307017 FAM92AA1XBS5 289 aa12.78□□□□□ -0.36
USP38-201ENST00000307017 FAM47E-STBD1D6RA91 191 aa12.78□□□□□ -0.36
USP38-201ENST00000307017 JAK1P23458 1154 aa12.78□□□□□ -0.36
USP38-201ENST00000307017 S100A3P33764 101 aa12.78□□□□□ -0.36
USP38-201ENST00000307017 BOLA3Q53S33 107 aa12.78□□□□□ -0.36
USP38-201ENST00000307017 DNAJC1Q96KC8 554 aaKnown RBP12.78□□□□□ -0.36
USP38-201ENST00000307017 S100A13Q99584 98 aa12.78□□□□□ -0.36
USP38-201ENST00000307017 CATSPERZQ9NTU4 200 aa12.78□□□□□ -0.36
USP38-201ENST00000307017 SOHLH2Q9NX45 425 aa12.78□□□□□ -0.36
USP38-201ENST00000307017 ADPRHL2Q9NX46 363 aa12.78□□□□□ -0.36
USP38-201ENST00000307017 POLR3HQ9Y535 204 aaPredicted RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms