RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 COLGALT2Q8IYK4 626 aa9.4□□□□□ -0.91
PTPRE-202ENST00000306042 MCOLN3Q8TDD5 553 aa9.4□□□□□ -0.91
PTPRE-202ENST00000306042 TWNKQ96RR1 684 aa9.4□□□□□ -0.91
PTPRE-202ENST00000306042 HEPHQ9BQS7 1158 aa9.4□□□□□ -0.91
PTPRE-202ENST00000306042 CD207Q9UJ71 328 aa9.4□□□□□ -0.91
PTPRE-202ENST00000306042 COG5Q9UP83 839 aa9.4□□□□□ -0.91
PTPRE-202ENST00000306042 BCORQ6W2J9 1755 aa9.39□□□□□ -0.91
PTPRE-202ENST00000306042 WDR27A2RRH5 827 aa9.39□□□□□ -0.91
PTPRE-202ENST00000306042 CLASP2O75122 1294 aaKnown RBP9.39□□□□□ -0.91
PTPRE-202ENST00000306042 PGAM1P18669 254 aa9.39□□□□□ -0.91
PTPRE-202ENST00000306042 MNAT1P51948 309 aa9.39□□□□□ -0.91
PTPRE-202ENST00000306042 TAS2R40P59535 323 aa9.39□□□□□ -0.91
PTPRE-202ENST00000306042 CDK16Q00536 496 aa9.39□□□□□ -0.91
PTPRE-202ENST00000306042 DMWDQ09019 674 aa9.39□□□□□ -0.91
PTPRE-202ENST00000306042 CAPRIN1Q14444 709 aaKnown RBP9.39□□□□□ -0.91
PTPRE-202ENST00000306042 RABEPKQ7Z6M1 372 aa9.39□□□□□ -0.91
PTPRE-202ENST00000306042 ST13P5Q8NFI4 369 aaPredicted RBP9.39□□□□□ -0.91
PTPRE-202ENST00000306042 CXorf38Q8TB03 319 aa9.39□□□□□ -0.91
PTPRE-202ENST00000306042 THOC1Q96FV9 657 aaKnown RBP9.39□□□□□ -0.91
PTPRE-202ENST00000306042 NUF2Q9BZD4 464 aa9.39□□□□□ -0.91
PTPRE-202ENST00000306042 IL22Q9GZX6 179 aa9.39□□□□□ -0.91
PTPRE-202ENST00000306042 ZCWPW1Q9H0M4 648 aa9.39□□□□□ -0.91
PTPRE-202ENST00000306042 MTRRQ9UBK8 725 aa9.39□□□□□ -0.91
PTPRE-202ENST00000306042 DNAJC16Q9Y2G8 782 aa9.39□□□□□ -0.91
PTPRE-202ENST00000306042 ACOT9Q9Y305 439 aa9.39□□□□□ -0.91
PTPRE-202ENST00000306042 H3BMM5 538 aa9.39□□□□□ -0.91
PTPRE-202ENST00000306042 CNPP09543 421 aaKnown RBP9.39□□□□□ -0.91
PTPRE-202ENST00000306042 PIRTP0C851 137 aa9.39□□□□□ -0.91
PTPRE-202ENST00000306042 SDHBP21912 280 aa9.39□□□□□ -0.91
PTPRE-202ENST00000306042 FBXW4P57775 412 aa9.39□□□□□ -0.91
PTPRE-202ENST00000306042 MARCH8Q5T0T0 291 aa9.39□□□□□ -0.91
PTPRE-202ENST00000306042 PKN3Q6P5Z2 889 aa9.39□□□□□ -0.91
PTPRE-202ENST00000306042 FBXO38Q6PIJ6 1188 aa9.39□□□□□ -0.91
PTPRE-202ENST00000306042 CRELD2Q6UXH1 353 aaPredicted RBP9.39□□□□□ -0.91
PTPRE-202ENST00000306042 VITQ6UXI7 678 aa9.39□□□□□ -0.91
PTPRE-202ENST00000306042 TDHQ8IZJ6 230 aa9.39□□□□□ -0.91
PTPRE-202ENST00000306042 NOA1Q8NC60 698 aaKnown RBP9.39□□□□□ -0.91
PTPRE-202ENST00000306042 NETO2Q8NC67 525 aa9.39□□□□□ -0.91
PTPRE-202ENST00000306042 MAGEC3Q8TD91 643 aa9.39□□□□□ -0.91
PTPRE-202ENST00000306042 CLEC4CQ8WTT0 213 aa9.39□□□□□ -0.91
PTPRE-202ENST00000306042 KCTD13Q8WZ19 329 aa9.39□□□□□ -0.91
PTPRE-202ENST00000306042 NELL2Q99435 816 aa9.39□□□□□ -0.91
PTPRE-202ENST00000306042 PAAF1Q9BRP4 392 aa9.39□□□□□ -0.91
PTPRE-202ENST00000306042 TLR10Q9BXR5 811 aa9.39□□□□□ -0.91
PTPRE-202ENST00000306042 EBF3Q9H4W6 596 aa9.39□□□□□ -0.91
PTPRE-202ENST00000306042 ZNF576Q9H609 170 aa9.39□□□□□ -0.91
PTPRE-202ENST00000306042 BPIFA1Q9NP55 256 aa9.39□□□□□ -0.91
PTPRE-202ENST00000306042 CATSPERZQ9NTU4 200 aa9.39□□□□□ -0.91
PTPRE-202ENST00000306042 ETNK2Q9NVF9 386 aa9.39□□□□□ -0.91
PTPRE-202ENST00000306042 EPS15L1Q9UBC2 864 aa9.39□□□□□ -0.91
PTPRE-202ENST00000306042 CTNNAL1Q9UBT7 734 aa9.39□□□□□ -0.91
PTPRE-202ENST00000306042 LRP5O75197 1615 aa9.39□□□□□ -0.91
PTPRE-202ENST00000306042 hCG_1818297A0A087WSY0 165 aa9.39□□□□□ -0.91
PTPRE-202ENST00000306042 QSOX1O00391 747 aa9.39□□□□□ -0.91
PTPRE-202ENST00000306042 DNALI1O14645 258 aaPredicted RBP9.39□□□□□ -0.91
PTPRE-202ENST00000306042 EIF3HO15372 352 aaKnown RBP eCLIP9.39□□□□□ -0.91
PTPRE-202ENST00000306042 RFPL2O75678 378 aa9.39□□□□□ -0.91
PTPRE-202ENST00000306042 NOL4O94818 638 aa9.39□□□□□ -0.91
PTPRE-202ENST00000306042 SLC25A14O95258 325 aaPredicted RBP9.39□□□□□ -0.91
PTPRE-202ENST00000306042 STAU1O95793 577 aaKnown RBP9.39□□□□□ -0.91
PTPRE-202ENST00000306042 ALPPL2P10696 532 aa9.39□□□□□ -0.91
PTPRE-202ENST00000306042 GCKP35557 465 aa9.39□□□□□ -0.91
PTPRE-202ENST00000306042 ITGA9Q13797 1035 aa9.39□□□□□ -0.91
PTPRE-202ENST00000306042 HSP90AA5PQ58FG0 334 aa9.39□□□□□ -0.91
PTPRE-202ENST00000306042 PCID2Q5JVF3 399 aa9.39□□□□□ -0.91
PTPRE-202ENST00000306042 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.39□□□□□ -0.91
PTPRE-202ENST00000306042 CCNI2Q6ZMN8 369 aaPredicted RBP9.39□□□□□ -0.91
PTPRE-202ENST00000306042 WDR41Q9HAD4 459 aa9.39□□□□□ -0.91
PTPRE-202ENST00000306042 CHST7Q9NS84 486 aa9.39□□□□□ -0.91
PTPRE-202ENST00000306042 VPS51Q9UID3 782 aa9.39□□□□□ -0.91
PTPRE-202ENST00000306042 FBXW11Q9UKB1 542 aa9.39□□□□□ -0.91
PTPRE-202ENST00000306042 MYH8P13535 1937 aa9.39□□□□□ -0.91
PTPRE-202ENST00000306042 GNGT2O14610 69 aa9.39□□□□□ -0.91
PTPRE-202ENST00000306042 LRCH4O75427 683 aa9.39□□□□□ -0.91
PTPRE-202ENST00000306042 AGTP01019 485 aa9.39□□□□□ -0.91
PTPRE-202ENST00000306042 FGF1P05230 155 aa9.39□□□□□ -0.91
PTPRE-202ENST00000306042 HLA-DPA1P20036 260 aa9.39□□□□□ -0.91
PTPRE-202ENST00000306042 LPOP22079 712 aaPredicted RBP9.39□□□□□ -0.91
PTPRE-202ENST00000306042 TGM3Q08188 693 aa9.39□□□□□ -0.91
PTPRE-202ENST00000306042 LRRC14Q15048 493 aa9.39□□□□□ -0.91
PTPRE-202ENST00000306042 EOGTQ5NDL2 527 aa9.39□□□□□ -0.91
PTPRE-202ENST00000306042 RIBC1Q8N443 379 aaPredicted RBP9.39□□□□□ -0.91
PTPRE-202ENST00000306042 OR52K1Q8NGK4 314 aa9.39□□□□□ -0.91
PTPRE-202ENST00000306042 NCLNQ969V3 563 aa9.39□□□□□ -0.91
PTPRE-202ENST00000306042 STK38LQ9Y2H1 464 aa9.39□□□□□ -0.91
PTPRE-202ENST00000306042 C2CD4BA6NLJ0 364 aa9.38□□□□□ -0.91
PTPRE-202ENST00000306042 ZNF839A8K0R7 811 aa9.38□□□□□ -0.91
PTPRE-202ENST00000306042 MAN2B1O00754 1011 aa9.38□□□□□ -0.91
PTPRE-202ENST00000306042 HCRTO43612 131 aa9.38□□□□□ -0.91
PTPRE-202ENST00000306042 CYP1A1P04798 512 aaPredicted RBP9.38□□□□□ -0.91
PTPRE-202ENST00000306042 RPS24P62847 133 aaKnown RBP9.38□□□□□ -0.91
PTPRE-202ENST00000306042 PPP2R2AP63151 447 aa9.38□□□□□ -0.91
PTPRE-202ENST00000306042 GALNT3Q14435 633 aa9.38□□□□□ -0.91
PTPRE-202ENST00000306042 SLC29A2Q14542 456 aa9.38□□□□□ -0.91
PTPRE-202ENST00000306042 SPANXN3Q5MJ09 141 aa9.38□□□□□ -0.91
PTPRE-202ENST00000306042 EFL1Q7Z2Z2 1120 aaKnown RBP9.38□□□□□ -0.91
PTPRE-202ENST00000306042 SIPA1Q96FS4 1042 aa9.38□□□□□ -0.91
PTPRE-202ENST00000306042 CYP2S1Q96SQ9 504 aa9.38□□□□□ -0.91
PTPRE-202ENST00000306042 NLNQ9BYT8 704 aa9.38□□□□□ -0.91
PTPRE-202ENST00000306042 ROPN1BQ9BZX4 212 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms