RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 ELOVL4Q9GZR5 314 aa13.22□□□□□ -0.29
TRIM35-201ENST00000305364 PRDM12Q9H4Q4 367 aa13.22□□□□□ -0.29
TRIM35-201ENST00000305364 ADAM28Q9UKQ2 775 aa13.22□□□□□ -0.29
TRIM35-201ENST00000305364 STAP1Q9ULZ2 295 aa13.22□□□□□ -0.29
TRIM35-201ENST00000305364 FADS3Q9Y5Q0 445 aa13.22□□□□□ -0.29
TRIM35-201ENST00000305364 E7ENX8 843 aa13.22□□□□□ -0.29
TRIM35-201ENST00000305364 GCATO75600 419 aa13.22□□□□□ -0.29
TRIM35-201ENST00000305364 CABYRO75952 493 aa13.22□□□□□ -0.29
TRIM35-201ENST00000305364 SERPINB1P30740 379 aa13.22□□□□□ -0.29
TRIM35-201ENST00000305364 CSE1LP55060 971 aaKnown RBP13.22□□□□□ -0.29
TRIM35-201ENST00000305364 YWHAHQ04917 246 aaPredicted RBP13.22□□□□□ -0.29
TRIM35-201ENST00000305364 DMPKQ09013 629 aa13.22□□□□□ -0.29
TRIM35-201ENST00000305364 BBS5Q8N3I7 341 aa13.22□□□□□ -0.29
TRIM35-201ENST00000305364 IPMKQ8NFU5 416 aa13.22□□□□□ -0.29
TRIM35-201ENST00000305364 HM13Q8TCT9 377 aa13.22□□□□□ -0.29
TRIM35-201ENST00000305364 MFSD3Q96ES6 412 aa13.22□□□□□ -0.29
TRIM35-201ENST00000305364 P2RY11Q96G91 374 aa13.22□□□□□ -0.29
TRIM35-201ENST00000305364 RBBP8Q99708 897 aa13.22□□□□□ -0.29
TRIM35-201ENST00000305364 HMGXB4Q9UGU5 601 aa13.22□□□□□ -0.29
TRIM35-201ENST00000305364 CYTH4Q9UIA0 394 aa13.22□□□□□ -0.29
TRIM35-201ENST00000305364 FBP2O00757 339 aa13.22□□□□□ -0.29
TRIM35-201ENST00000305364 GSTA4O15217 222 aa13.22□□□□□ -0.29
TRIM35-201ENST00000305364 CLIC3O95833 236 aa13.22□□□□□ -0.29
TRIM35-201ENST00000305364 PAMP19021 973 aa13.22□□□□□ -0.29
TRIM35-201ENST00000305364 ENPEPQ07075 957 aa13.22□□□□□ -0.29
TRIM35-201ENST00000305364 STXBP5Q5T5C0 1151 aa13.22□□□□□ -0.29
TRIM35-201ENST00000305364 CES4AQ5XG92 561 aa13.22□□□□□ -0.29
TRIM35-201ENST00000305364 SLC41A1Q8IVJ1 513 aa13.22□□□□□ -0.29
TRIM35-201ENST00000305364 SHCBP1Q8NEM2 672 aa13.22□□□□□ -0.29
TRIM35-201ENST00000305364 OR6P1Q8NGX9 317 aa13.22□□□□□ -0.29
TRIM35-201ENST00000305364 ADI1Q9BV57 179 aa13.22□□□□□ -0.29
TRIM35-201ENST00000305364 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.22□□□□□ -0.29
TRIM35-201ENST00000305364 ZNF232Q9UNY5 417 aa13.22□□□□□ -0.29
TRIM35-201ENST00000305364 A0A1B0GTW7 788 aa13.21□□□□□ -0.29
TRIM35-201ENST00000305364 DHRS12A0PJE2 317 aa13.21□□□□□ -0.29
TRIM35-201ENST00000305364 FBXO21O94952 628 aa13.21□□□□□ -0.29
TRIM35-201ENST00000305364 SLC4A1P02730 911 aa13.21□□□□□ -0.29
TRIM35-201ENST00000305364 STAG3L1P0CL83 205 aa13.21□□□□□ -0.29
TRIM35-201ENST00000305364 TSPAN8P19075 237 aa13.21□□□□□ -0.29
TRIM35-201ENST00000305364 ATXN1P54253 815 aaKnown RBP13.21□□□□□ -0.29
TRIM35-201ENST00000305364 ITGA7Q13683 1181 aa13.21□□□□□ -0.29
TRIM35-201ENST00000305364 ZNF423Q2M1K9 1284 aa13.21□□□□□ -0.29
TRIM35-201ENST00000305364 CENPSQ8N2Z9 138 aa13.21□□□□□ -0.29
TRIM35-201ENST00000305364 CANT1Q8WVQ1 401 aa13.21□□□□□ -0.29
TRIM35-201ENST00000305364 HPS1Q92902 700 aa13.21□□□□□ -0.29
TRIM35-201ENST00000305364 UNC93B1Q9H1C4 597 aa13.21□□□□□ -0.29
TRIM35-201ENST00000305364 SPDYE2BA6NHP3 402 aa13.21□□□□□ -0.29
TRIM35-201ENST00000305364 TMEM233B4DJY2 109 aa13.21□□□□□ -0.29
TRIM35-201ENST00000305364 H3BNH8 94 aa13.21□□□□□ -0.29
TRIM35-201ENST00000305364 AP1G1O43747 822 aa13.21□□□□□ -0.29
TRIM35-201ENST00000305364 SPDYE6P0CI01 402 aa13.21□□□□□ -0.29
TRIM35-201ENST00000305364 RPL10P27635 214 aaKnown RBP13.21□□□□□ -0.29
TRIM35-201ENST00000305364 TCF7P36402 384 aaPredicted RBP13.21□□□□□ -0.29
TRIM35-201ENST00000305364 YAP1P46937 504 aaKnown RBP13.21□□□□□ -0.29
TRIM35-201ENST00000305364 ZNF132P52740 706 aa13.21□□□□□ -0.29
TRIM35-201ENST00000305364 LIMK2P53671 638 aa13.21□□□□□ -0.29
TRIM35-201ENST00000305364 HMGCS2P54868 508 aa13.21□□□□□ -0.29
TRIM35-201ENST00000305364 TNFAIP2Q03169 654 aa13.21□□□□□ -0.29
TRIM35-201ENST00000305364 ZNF829Q3KNS6 432 aaPredicted RBP13.21□□□□□ -0.29
TRIM35-201ENST00000305364 SH2D5Q6ZV89 423 aa13.21□□□□□ -0.29
TRIM35-201ENST00000305364 LILRA2Q8N149 483 aa13.21□□□□□ -0.29
TRIM35-201ENST00000305364 TTC39CQ8N584 583 aa13.21□□□□□ -0.29
TRIM35-201ENST00000305364 ASB9Q96DX5 294 aa13.21□□□□□ -0.29
TRIM35-201ENST00000305364 TWNKQ96RR1 684 aa13.21□□□□□ -0.29
TRIM35-201ENST00000305364 HIPK3Q9H422 1215 aa13.21□□□□□ -0.29
TRIM35-201ENST00000305364 TMEM134Q9H6X4 195 aa13.21□□□□□ -0.29
TRIM35-201ENST00000305364 PALMDQ9NP74 551 aa13.21□□□□□ -0.29
TRIM35-201ENST00000305364 ZDHHC2Q9UIJ5 367 aa13.21□□□□□ -0.29
TRIM35-201ENST00000305364 COPG1Q9Y678 874 aaKnown RBP13.21□□□□□ -0.29
TRIM35-201ENST00000305364 LACTBL1A8MY62 500 aa13.21□□□□□ -0.29
TRIM35-201ENST00000305364 KRT75O95678 551 aa13.21□□□□□ -0.29
TRIM35-201ENST00000305364 MLNP12872 115 aa13.21□□□□□ -0.29
TRIM35-201ENST00000305364 ASPAP45381 313 aa13.21□□□□□ -0.29
TRIM35-201ENST00000305364 POU6F1Q14863 301 aa13.21□□□□□ -0.29
TRIM35-201ENST00000305364 PIGGQ5H8A4 983 aa13.21□□□□□ -0.29
TRIM35-201ENST00000305364 SPPL2CQ8IUH8 684 aa13.21□□□□□ -0.29
TRIM35-201ENST00000305364 TMEM126BQ8IUX1 230 aa13.21□□□□□ -0.29
TRIM35-201ENST00000305364 SEPT1Q8WYJ6 367 aa13.21□□□□□ -0.29
TRIM35-201ENST00000305364 MCRS1Q96EZ8 462 aa13.21□□□□□ -0.29
TRIM35-201ENST00000305364 EIF2AQ9BY44 585 aaKnown RBP13.21□□□□□ -0.29
TRIM35-201ENST00000305364 CYP3A43Q9HB55 503 aa13.21□□□□□ -0.29
TRIM35-201ENST00000305364 NSMCE4AQ9NXX6 385 aa13.21□□□□□ -0.29
TRIM35-201ENST00000305364 RIMS3Q9UJD0 308 aa13.21□□□□□ -0.29
TRIM35-201ENST00000305364 EMCNQ9ULC0 261 aa13.21□□□□□ -0.29
TRIM35-201ENST00000305364 PADI4Q9UM07 663 aa13.21□□□□□ -0.29
TRIM35-201ENST00000305364 PCDHGA4Q9Y5G9 962 aa13.21□□□□□ -0.29
TRIM35-201ENST00000305364 ORC6Q9Y5N6 252 aa13.21□□□□□ -0.29
TRIM35-201ENST00000305364 M0QYT0 321 aa13.21□□□□□ -0.3
TRIM35-201ENST00000305364 LSM1O15116 133 aaKnown RBP13.21□□□□□ -0.3
TRIM35-201ENST00000305364 HTRA2O43464 458 aaPredicted RBP13.21□□□□□ -0.3
TRIM35-201ENST00000305364 MT-ND1P03886 318 aa13.21□□□□□ -0.3
TRIM35-201ENST00000305364 HALP42357 657 aa13.21□□□□□ -0.3
TRIM35-201ENST00000305364 IREB2P48200 963 aaKnown RBP13.21□□□□□ -0.3
TRIM35-201ENST00000305364 CLCN3P51790 818 aa13.21□□□□□ -0.3
TRIM35-201ENST00000305364 RAD23AP54725 363 aa13.21□□□□□ -0.3
TRIM35-201ENST00000305364 SPIDRQ14159 915 aa13.21□□□□□ -0.3
TRIM35-201ENST00000305364 CERCAMQ5T4B2 595 aa13.21□□□□□ -0.3
TRIM35-201ENST00000305364 KCTD8Q6ZWB6 473 aa13.21□□□□□ -0.3
TRIM35-201ENST00000305364 UTS2BQ765I0 119 aa13.21□□□□□ -0.3
TRIM35-201ENST00000305364 MAVSQ7Z434 540 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms