RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 PLA2G4CQ9UP65 541 aa27.62■■■□□ 2.01
HDAC3-201ENST00000305264 CXorf51AA0A1B0GTR3 108 aa27.62■■■□□ 2.01
HDAC3-201ENST00000305264 CCDC188H7C350 402 aa27.62■■■□□ 2.01
HDAC3-201ENST00000305264 RNF103O00237 685 aa27.62■■■□□ 2.01
HDAC3-201ENST00000305264 JCHAINP01591 159 aa27.62■■■□□ 2.01
HDAC3-201ENST00000305264 SRPRAP08240 638 aaKnown RBP27.62■■■□□ 2.01
HDAC3-201ENST00000305264 PTPN3P26045 913 aa27.62■■■□□ 2.01
HDAC3-201ENST00000305264 TIE1P35590 1138 aa27.62■■■□□ 2.01
HDAC3-201ENST00000305264 HNRNPDQ14103 355 aaKnown RBP27.62■■■□□ 2.01
HDAC3-201ENST00000305264 CYTH1Q15438 398 aa27.62■■■□□ 2.01
HDAC3-201ENST00000305264 FNDC3BQ53EP0 1204 aaKnown RBP27.62■■■□□ 2.01
HDAC3-201ENST00000305264 INO80DQ53TQ3 878 aaPredicted RBP27.62■■■□□ 2.01
HDAC3-201ENST00000305264 MARC1Q5VT66 337 aa27.62■■■□□ 2.01
HDAC3-201ENST00000305264 NSMCE1Q8WV22 266 aa27.62■■■□□ 2.01
HDAC3-201ENST00000305264 TBC1D17Q9HA65 648 aa27.62■■■□□ 2.01
HDAC3-201ENST00000305264 THAP10Q9P2Z0 257 aaPredicted RBP27.62■■■□□ 2.01
HDAC3-201ENST00000305264 KANSL1LA0AUZ9 987 aa27.61■■■□□ 2.01
HDAC3-201ENST00000305264 CHRNA3P32297 505 aa27.61■■■□□ 2.01
HDAC3-201ENST00000305264 FNTAP49354 379 aa27.61■■■□□ 2.01
HDAC3-201ENST00000305264 SLC20A2Q08357 652 aa27.61■■■□□ 2.01
HDAC3-201ENST00000305264 UBXN2BQ14CS0 331 aa27.61■■■□□ 2.01
HDAC3-201ENST00000305264 C2orf27AQ580R0 203 aa27.61■■■□□ 2.01
HDAC3-201ENST00000305264 TEX26Q8N6G2 289 aa27.61■■■□□ 2.01
HDAC3-201ENST00000305264 ZNF366Q8N895 744 aa27.61■■■□□ 2.01
HDAC3-201ENST00000305264 IL12RB2Q99665 862 aa27.61■■■□□ 2.01
HDAC3-201ENST00000305264 CACNA2D2Q9NY47 1150 aa27.61■■■□□ 2.01
HDAC3-201ENST00000305264 DRG1Q9Y295 367 aaKnown RBP27.61■■■□□ 2.01
HDAC3-201ENST00000305264 TTC34A8MYJ7 566 aa27.6■■■□□ 2.01
HDAC3-201ENST00000305264 SGK1O00141 431 aa27.6■■■□□ 2.01
HDAC3-201ENST00000305264 DCXO43602 365 aa27.6■■■□□ 2.01
HDAC3-201ENST00000305264 IL12RB1P42701 662 aa27.6■■■□□ 2.01
HDAC3-201ENST00000305264 MMP13P45452 471 aa27.6■■■□□ 2.01
HDAC3-201ENST00000305264 RENBPP51606 427 aa27.6■■■□□ 2.01
HDAC3-201ENST00000305264 RFTN1Q14699 578 aaPredicted RBP27.6■■■□□ 2.01
HDAC3-201ENST00000305264 TSEN2Q8NCE0 465 aaKnown RBP27.6■■■□□ 2.01
HDAC3-201ENST00000305264 CFAP69A5D8W1 941 aa27.6■■■□□ 2.01
HDAC3-201ENST00000305264 WASH3PC4AMC7 463 aa27.6■■■□□ 2.01
HDAC3-201ENST00000305264 MUSKO15146 869 aa27.6■■■□□ 2.01
HDAC3-201ENST00000305264 MTSS1O43312 755 aa27.6■■■□□ 2.01
HDAC3-201ENST00000305264 RNF40O75150 1001 aa27.6■■■□□ 2.01
HDAC3-201ENST00000305264 ZNF821O75541 412 aaPredicted RBP27.6■■■□□ 2.01
HDAC3-201ENST00000305264 HLA-DQB2P05538 268 aa27.6■■■□□ 2.01
HDAC3-201ENST00000305264 HNRNPLP14866 589 aaKnown RBP eCLIP27.6■■■□□ 2.01
HDAC3-201ENST00000305264 ST8SIA6P61647 398 aa27.6■■■□□ 2.01
HDAC3-201ENST00000305264 ZNF235Q14590 738 aa27.6■■■□□ 2.01
HDAC3-201ENST00000305264 C22orf39Q6P5X5 142 aa27.6■■■□□ 2.01
HDAC3-201ENST00000305264 PRUNE1Q86TP1 453 aa27.6■■■□□ 2.01
HDAC3-201ENST00000305264 CCDC105Q8IYK2 499 aa27.6■■■□□ 2.01
HDAC3-201ENST00000305264 PGBD5Q8N414 524 aa27.6■■■□□ 2.01
HDAC3-201ENST00000305264 ALLCQ8N6M5 410 aa27.6■■■□□ 2.01
HDAC3-201ENST00000305264 CNTD1Q8N815 330 aa27.6■■■□□ 2.01
HDAC3-201ENST00000305264 GLIS1Q8NBF1 620 aa27.6■■■□□ 2.01
HDAC3-201ENST00000305264 CINPQ9BW66 212 aaPredicted RBP27.6■■■□□ 2.01
HDAC3-201ENST00000305264 RRAGDQ9NQL2 400 aaPredicted RBP27.6■■■□□ 2.01
HDAC3-201ENST00000305264 RBM22Q9NW64 420 aaKnown RBP eCLIP27.6■■■□□ 2.011e-7■■■■■ 41.1
HDAC3-201ENST00000305264 MRPS17Q9Y2R5 130 aaKnown RBP27.6■■■□□ 2.01
HDAC3-201ENST00000305264 ATP9BO43861 1147 aa27.59■■■□□ 2.01
HDAC3-201ENST00000305264 CHRNB1P11230 501 aa27.59■■■□□ 2.01
HDAC3-201ENST00000305264 HLA-EP13747 358 aa27.59■■■□□ 2.01
HDAC3-201ENST00000305264 VASPP50552 380 aaPredicted RBP27.59■■■□□ 2.01
HDAC3-201ENST00000305264 SIGLEC14Q08ET2 396 aa27.59■■■□□ 2.01
HDAC3-201ENST00000305264 DLG2Q15700 870 aa27.59■■■□□ 2.01
HDAC3-201ENST00000305264 ACCSLQ4AC99 568 aa27.59■■■□□ 2.01
HDAC3-201ENST00000305264 DGKKQ5KSL6 1271 aa27.59■■■□□ 2.01
HDAC3-201ENST00000305264 FRS2Q8WU20 508 aa27.59■■■□□ 2.01
HDAC3-201ENST00000305264 CASKIN2Q8WXE0 1202 aa27.59■■■□□ 2.01
HDAC3-201ENST00000305264 EDAQ92838 391 aa27.59■■■□□ 2.01
HDAC3-201ENST00000305264 EXOC2Q96KP1 924 aa27.59■■■□□ 2.01
HDAC3-201ENST00000305264 AGAP3Q96P47 875 aa27.59■■■□□ 2.01
HDAC3-201ENST00000305264 KRT12Q99456 494 aa27.59■■■□□ 2.01
HDAC3-201ENST00000305264 TNKS2Q9H2K2 1166 aa27.59■■■□□ 2.01
HDAC3-201ENST00000305264 TMEM245Q9H330 911 aa27.59■■■□□ 2.01
HDAC3-201ENST00000305264 MTG2Q9H4K7 406 aa27.59■■■□□ 2.01
HDAC3-201ENST00000305264 NT5MQ9NPB1 228 aa27.59■■■□□ 2.01
HDAC3-201ENST00000305264 LHX3Q9UBR4 397 aa27.59■■■□□ 2.01
HDAC3-201ENST00000305264 SEPT3Q9UH03 358 aa27.59■■■□□ 2.01
HDAC3-201ENST00000305264 TTLL3Q9Y4R7 772 aa27.59■■■□□ 2.01
HDAC3-201ENST00000305264 TECTAO75443 2155 aa27.59■■■□□ 2.01
HDAC3-201ENST00000305264 IFNB1P01574 187 aa27.59■■■□□ 2.01
HDAC3-201ENST00000305264 PRKCHP24723 683 aa27.59■■■□□ 2.01
HDAC3-201ENST00000305264 FBXO43Q4G163 708 aa27.59■■■□□ 2.01
HDAC3-201ENST00000305264 TEX44Q53QW1 395 aa27.59■■■□□ 2.01
HDAC3-201ENST00000305264 SERPINA13PQ6UXR4 307 aa27.59■■■□□ 2.01
HDAC3-201ENST00000305264 ZNF567Q8N184 647 aa27.59■■■□□ 2.01
HDAC3-201ENST00000305264 ATL2Q8NHH9 583 aa27.59■■■□□ 2.01
HDAC3-201ENST00000305264 RTP4Q96DX8 246 aa27.59■■■□□ 2.01
HDAC3-201ENST00000305264 PSKH2Q96QS6 385 aa27.59■■■□□ 2.01
HDAC3-201ENST00000305264 CARD6Q9BX69 1037 aa27.59■■■□□ 2.01
HDAC3-201ENST00000305264 TM6SF2Q9BZW4 377 aa27.59■■■□□ 2.01
HDAC3-201ENST00000305264 ETS1P14921 441 aa27.58■■■□□ 2.01
HDAC3-201ENST00000305264 NNMTP40261 264 aa27.58■■■□□ 2.01
HDAC3-201ENST00000305264 RGRP47804 291 aa27.58■■■□□ 2.01
HDAC3-201ENST00000305264 MAXP61244 160 aa27.58■■■□□ 2.01
HDAC3-201ENST00000305264 Q6ZS52 159 aa27.58■■■□□ 2.01
HDAC3-201ENST00000305264 Q6ZVU0 165 aa27.58■■■□□ 2.01
HDAC3-201ENST00000305264 CHPFQ8IZ52 775 aa27.58■■■□□ 2.01
HDAC3-201ENST00000305264 KDM1BQ8NB78 822 aa27.58■■■□□ 2.01
HDAC3-201ENST00000305264 CCDC110Q8TBZ0 833 aa27.58■■■□□ 2.01
HDAC3-201ENST00000305264 FERMT1Q9BQL6 677 aa27.58■■■□□ 2.01
HDAC3-201ENST00000305264 AMACRQ9UHK6 382 aa27.58■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms