RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 DPP3Q9NY33 737 aa14.64□□□□□ -0.07
CDT1-201ENST00000301019 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.64□□□□□ -0.07
CDT1-201ENST00000301019 AASSQ9UDR5 926 aa14.64□□□□□ -0.07
CDT1-201ENST00000301019 SORCS3Q9UPU3 1222 aa14.64□□□□□ -0.07
CDT1-201ENST00000301019 HNRNPLP14866 589 aaKnown RBP eCLIP14.63□□□□□ -0.07
CDT1-201ENST00000301019 POLR2BP30876 1174 aaKnown RBP14.63□□□□□ -0.07
CDT1-201ENST00000301019 SREBF1P36956 1147 aa14.63□□□□□ -0.07
CDT1-201ENST00000301019 CAPRIN1Q14444 709 aaKnown RBP14.63□□□□□ -0.07
CDT1-201ENST00000301019 USP41Q3LFD5 358 aa14.63□□□□□ -0.07
CDT1-201ENST00000301019 AGKQ53H12 422 aa14.63□□□□□ -0.07
CDT1-201ENST00000301019 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.63□□□□□ -0.073e-6■■■■■ 30.4
CDT1-201ENST00000301019 PQLC3Q8N755 202 aa14.63□□□□□ -0.07
CDT1-201ENST00000301019 PNPLA1Q8N8W4 532 aa14.63□□□□□ -0.07
CDT1-201ENST00000301019 SLC16A10Q8TF71 515 aa14.63□□□□□ -0.07
CDT1-201ENST00000301019 LHPPQ9H008 270 aa14.63□□□□□ -0.07
CDT1-201ENST00000301019 CHRAC1Q9NRG0 131 aa14.63□□□□□ -0.07
CDT1-201ENST00000301019 GTSE1Q9NYZ3 720 aa14.63□□□□□ -0.07
CDT1-201ENST00000301019 ZDHHC2Q9UIJ5 367 aa14.63□□□□□ -0.07
CDT1-201ENST00000301019 COL11A2P13942 1736 aaPredicted RBP14.63□□□□□ -0.07
CDT1-201ENST00000301019 IGLV3-22A0A075B6J6 115 aa14.63□□□□□ -0.07
CDT1-201ENST00000301019 PHGDHO43175 533 aaKnown RBP14.63□□□□□ -0.07
CDT1-201ENST00000301019 PSMD10O75832 226 aa14.63□□□□□ -0.07
CDT1-201ENST00000301019 IL18RAPO95256 599 aa14.63□□□□□ -0.07
CDT1-201ENST00000301019 BMP10O95393 424 aa14.63□□□□□ -0.07
CDT1-201ENST00000301019 HMGCRP04035 888 aa14.63□□□□□ -0.07
CDT1-201ENST00000301019 PCNAP12004 261 aa14.63□□□□□ -0.07
CDT1-201ENST00000301019 MIPP30301 263 aa14.63□□□□□ -0.07
CDT1-201ENST00000301019 SERPINB1P30740 379 aa14.63□□□□□ -0.07
CDT1-201ENST00000301019 NLRP11P59045 1033 aaKnown RBP14.63□□□□□ -0.07
CDT1-201ENST00000301019 ARCQ7LC44 396 aa14.63□□□□□ -0.07
CDT1-201ENST00000301019 OR5B17Q8NGF7 314 aa14.63□□□□□ -0.07
CDT1-201ENST00000301019 SNX19Q92543 992 aa14.63□□□□□ -0.07
CDT1-201ENST00000301019 CTRCQ99895 268 aa14.63□□□□□ -0.07
CDT1-201ENST00000301019 SEL1LQ9UBV2 794 aa14.63□□□□□ -0.07
CDT1-201ENST00000301019 TNFRSF10AO00220 468 aa14.62□□□□□ -0.07
CDT1-201ENST00000301019 C1QAP02745 245 aa14.62□□□□□ -0.07
CDT1-201ENST00000301019 FYNP06241 537 aa14.62□□□□□ -0.07
CDT1-201ENST00000301019 MTHFD1P11586 935 aaKnown RBP14.62□□□□□ -0.07
CDT1-201ENST00000301019 IFI30P13284 250 aa14.62□□□□□ -0.07
CDT1-201ENST00000301019 NCK1P16333 377 aa14.62□□□□□ -0.07
CDT1-201ENST00000301019 BMPR1AP36894 532 aa14.62□□□□□ -0.07
CDT1-201ENST00000301019 RAP1GAPP47736 663 aa14.62□□□□□ -0.07
CDT1-201ENST00000301019 SLC7A2P52569 658 aa14.62□□□□□ -0.07
CDT1-201ENST00000301019 TPD52P55327 224 aaPredicted RBP14.62□□□□□ -0.07
CDT1-201ENST00000301019 CYP24A1Q07973 514 aa14.62□□□□□ -0.07
CDT1-201ENST00000301019 MERTKQ12866 999 aa14.62□□□□□ -0.07
CDT1-201ENST00000301019 ZNF460Q14592 562 aa14.62□□□□□ -0.07
CDT1-201ENST00000301019 OXA1LQ15070 435 aa14.62□□□□□ -0.07
CDT1-201ENST00000301019 ARL13AQ5H913 290 aaPredicted RBP14.62□□□□□ -0.07
CDT1-201ENST00000301019 EPGNQ6UW88 154 aa14.62□□□□□ -0.07
CDT1-201ENST00000301019 BSNDQ8WZ55 320 aa14.62□□□□□ -0.07
CDT1-201ENST00000301019 APOL2Q9BQE5 337 aa14.62□□□□□ -0.07
CDT1-201ENST00000301019 C17orf80Q9BSJ5 609 aa14.62□□□□□ -0.07
CDT1-201ENST00000301019 GATA5Q9BWX5 397 aaPredicted RBP14.62□□□□□ -0.07
CDT1-201ENST00000301019 CYP4F12Q9HCS2 524 aa14.62□□□□□ -0.07
CDT1-201ENST00000301019 MRPL42Q9Y6G3 142 aaKnown RBP14.62□□□□□ -0.07
CDT1-201ENST00000301019 JRKO75564 520 aa14.62□□□□□ -0.07
CDT1-201ENST00000301019 RSL1D1O76021 490 aaKnown RBP14.62□□□□□ -0.07
CDT1-201ENST00000301019 CHRM3P20309 590 aa14.62□□□□□ -0.07
CDT1-201ENST00000301019 FMO4P31512 558 aa14.62□□□□□ -0.07
CDT1-201ENST00000301019 NT5C2P49902 561 aa14.62□□□□□ -0.07
CDT1-201ENST00000301019 PLK1P53350 603 aa14.62□□□□□ -0.07
CDT1-201ENST00000301019 SEL1L3Q68CR1 1132 aa14.62□□□□□ -0.07
CDT1-201ENST00000301019 STYK1Q6J9G0 422 aa14.62□□□□□ -0.07
CDT1-201ENST00000301019 LYPD8Q6UX82 237 aa14.62□□□□□ -0.07
CDT1-201ENST00000301019 SLC9A9Q8IVB4 645 aa14.62□□□□□ -0.07
CDT1-201ENST00000301019 CCDC103Q8IW40 242 aa14.62□□□□□ -0.07
CDT1-201ENST00000301019 SLC43A3Q8NBI5 491 aa14.62□□□□□ -0.07
CDT1-201ENST00000301019 TFAP2CQ92754 450 aa14.62□□□□□ -0.07
CDT1-201ENST00000301019 AGAP2Q99490 1192 aa14.62□□□□□ -0.07
CDT1-201ENST00000301019 PRRG3Q9BZD7 231 aa14.62□□□□□ -0.07
CDT1-201ENST00000301019 NGRNQ9NPE2 291 aaKnown RBP14.62□□□□□ -0.07
CDT1-201ENST00000301019 TBX20Q9UMR3 447 aa14.62□□□□□ -0.07
CDT1-201ENST00000301019 C9IYK1 514 aa14.62□□□□□ -0.07
CDT1-201ENST00000301019 SNHG28P0DPA3 235 aa14.62□□□□□ -0.07
CDT1-201ENST00000301019 FSHRP23945 695 aa14.62□□□□□ -0.07
CDT1-201ENST00000301019 NPTX2P47972 431 aa14.62□□□□□ -0.07
CDT1-201ENST00000301019 PTP4A2Q12974 167 aa14.62□□□□□ -0.07
CDT1-201ENST00000301019 MADCAM1Q13477 382 aa14.62□□□□□ -0.07
CDT1-201ENST00000301019 AQP6Q13520 282 aa14.62□□□□□ -0.07
CDT1-201ENST00000301019 CUL2Q13617 745 aa14.62□□□□□ -0.07
CDT1-201ENST00000301019 KCNJ11Q14654 390 aa14.62□□□□□ -0.07
CDT1-201ENST00000301019 SLC39A4Q6P5W5 647 aa14.62□□□□□ -0.07
CDT1-201ENST00000301019 CRTC3Q6UUV7 619 aa14.62□□□□□ -0.07
CDT1-201ENST00000301019 GET4Q7L5D6 327 aaPredicted RBP14.62□□□□□ -0.07
CDT1-201ENST00000301019 AKAP14Q86UN6 197 aa14.62□□□□□ -0.07
CDT1-201ENST00000301019 PTCD2Q8WV60 388 aaKnown RBP14.62□□□□□ -0.07
CDT1-201ENST00000301019 TRUB1Q8WWH5 349 aaKnown RBP14.62□□□□□ -0.07
CDT1-201ENST00000301019 SH3YL1Q96HL8 342 aaPredicted RBP14.62□□□□□ -0.07
CDT1-201ENST00000301019 GDAP2Q9NXN4 497 aa14.62□□□□□ -0.07
CDT1-201ENST00000301019 IFT80Q9P2H3 777 aaPredicted RBP14.62□□□□□ -0.07
CDT1-201ENST00000301019 SLCO3A1Q9UIG8 710 aa14.62□□□□□ -0.07
CDT1-201ENST00000301019 COPG1Q9Y678 874 aaKnown RBP14.62□□□□□ -0.07
CDT1-201ENST00000301019 CLDN25C9JDP6 229 aa14.61□□□□□ -0.07
CDT1-201ENST00000301019 SNPHO15079 494 aa14.61□□□□□ -0.07
CDT1-201ENST00000301019 TMCC2O75069 709 aa14.61□□□□□ -0.07
CDT1-201ENST00000301019 ASNSP08243 561 aa14.61□□□□□ -0.07
CDT1-201ENST00000301019 MGAT1P26572 445 aa14.61□□□□□ -0.07
CDT1-201ENST00000301019 SHMT1P34896 483 aa14.61□□□□□ -0.07
CDT1-201ENST00000301019 RARRES1P49788 294 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms