RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 CRHR1P34998 444 aa22.3■■□□□ 1.16
TPM4-201ENST00000300933 PGM1P36871 562 aa22.3■■□□□ 1.16
TPM4-201ENST00000300933 SERPINB9P50453 376 aa22.3■■□□□ 1.16
TPM4-201ENST00000300933 PDCD2Q16342 344 aaPredicted RBP22.3■■□□□ 1.16
TPM4-201ENST00000300933 CTXN3Q4LDR2 81 aa22.3■■□□□ 1.16
TPM4-201ENST00000300933 ALYREFQ86V81 257 aaKnown RBP22.3■■□□□ 1.16
TPM4-201ENST00000300933 TNS4Q8IZW8 715 aa22.3■■□□□ 1.16
TPM4-201ENST00000300933 EZH1Q92800 747 aaPredicted RBP22.3■■□□□ 1.16
TPM4-201ENST00000300933 LRRC40Q9H9A6 602 aa22.3■■□□□ 1.16
TPM4-201ENST00000300933 CASS4Q9NQ75 786 aa22.3■■□□□ 1.16
TPM4-201ENST00000300933 C20orf96Q9NUD7 363 aaPredicted RBP22.3■■□□□ 1.16
TPM4-201ENST00000300933 RPLP2P05387 115 aaKnown RBP22.3■■□□□ 1.16
TPM4-201ENST00000300933 ARTNQ5T4W7 220 aa22.3■■□□□ 1.16
TPM4-201ENST00000300933 RSPO2Q6UXX9 243 aaPredicted RBP22.3■■□□□ 1.16
TPM4-201ENST00000300933 SERBP1Q8NC51 408 aaKnown RBP eCLIP22.3■■□□□ 1.16
TPM4-201ENST00000300933 B4GALNT2Q8NHY0 566 aa22.3■■□□□ 1.16
TPM4-201ENST00000300933 URGCPQ8TCY9 931 aa22.3■■□□□ 1.16
TPM4-201ENST00000300933 MOCOSQ96EN8 888 aa22.3■■□□□ 1.16
TPM4-201ENST00000300933 OSBPL2Q9H1P3 480 aa22.3■■□□□ 1.16
TPM4-201ENST00000300933 CRISPLD1Q9H336 500 aa22.3■■□□□ 1.16
TPM4-201ENST00000300933 IARS2Q9NSE4 1012 aaKnown RBP22.3■■□□□ 1.16
TPM4-201ENST00000300933 THSD7BQ9C0I4 1608 aa22.3■■□□□ 1.16
TPM4-201ENST00000300933 NBNO60934 754 aa22.29■■□□□ 1.16
TPM4-201ENST00000300933 GSRP00390 522 aa22.29■■□□□ 1.16
TPM4-201ENST00000300933 HSF5Q4G112 596 aaPredicted RBP22.29■■□□□ 1.16
TPM4-201ENST00000300933 TMEM173Q86WV6 379 aaPredicted RBP22.29■■□□□ 1.16
TPM4-201ENST00000300933 PLD6Q8N2A8 252 aaKnown RBP22.29■■□□□ 1.16
TPM4-201ENST00000300933 DCLK2Q8N568 766 aa22.29■■□□□ 1.16
TPM4-201ENST00000300933 ZNF398Q8TD17 642 aa22.29■■□□□ 1.16
TPM4-201ENST00000300933 DPF3Q92784 378 aa22.29■■□□□ 1.16
TPM4-201ENST00000300933 SMOC2Q9H3U7 446 aa22.29■■□□□ 1.16
TPM4-201ENST00000300933 TMEM216Q9P0N5 145 aa22.29■■□□□ 1.16
TPM4-201ENST00000300933 MTO1Q9Y2Z2 717 aaKnown RBP22.29■■□□□ 1.16
TPM4-201ENST00000300933 E9PAM4 449 aa22.29■■□□□ 1.16
TPM4-201ENST00000300933 ITM2AO43736 263 aa22.29■■□□□ 1.16
TPM4-201ENST00000300933 MAFKO60675 156 aa22.29■■□□□ 1.16
TPM4-201ENST00000300933 EOMESO95936 686 aa22.29■■□□□ 1.16
TPM4-201ENST00000300933 BPGMP07738 259 aa22.29■■□□□ 1.16
TPM4-201ENST00000300933 TCTN1Q2MV58 587 aa22.29■■□□□ 1.16
TPM4-201ENST00000300933 FASTKD1Q53R41 847 aaKnown RBP22.29■■□□□ 1.16
TPM4-201ENST00000300933 PIK3R6Q5UE93 754 aa22.29■■□□□ 1.16
TPM4-201ENST00000300933 FBXO27Q8NI29 283 aa22.29■■□□□ 1.16
TPM4-201ENST00000300933 CREBZFQ9NS37 354 aa22.29■■□□□ 1.16
TPM4-201ENST00000300933 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.28■■□□□ 1.16
TPM4-201ENST00000300933 PYGLP06737 847 aa22.28■■□□□ 1.16
TPM4-201ENST00000300933 CHRNA4P43681 627 aa22.28■■□□□ 1.16
TPM4-201ENST00000300933 GPNMBQ14956 572 aa22.28■■□□□ 1.16
TPM4-201ENST00000300933 PSMD5Q16401 504 aa22.28■■□□□ 1.16
TPM4-201ENST00000300933 PCSK7Q16549 785 aa22.28■■□□□ 1.16
TPM4-201ENST00000300933 ATG14Q6ZNE5 492 aa22.28■■□□□ 1.16
TPM4-201ENST00000300933 CIR1Q86X95 450 aaPredicted RBP22.28■■□□□ 1.16
TPM4-201ENST00000300933 ABI1Q8IZP0 508 aa22.28■■□□□ 1.16
TPM4-201ENST00000300933 PPP1R14CQ8TAE6 165 aa22.28■■□□□ 1.16
TPM4-201ENST00000300933 CLPTM1LQ96KA5 538 aa22.28■■□□□ 1.16
TPM4-201ENST00000300933 CAPN15O75808 1086 aa22.28■■□□□ 1.16
TPM4-201ENST00000300933 CNTN5O94779 1100 aa22.28■■□□□ 1.16
TPM4-201ENST00000300933 OAZ2O95190 189 aa22.28■■□□□ 1.16
TPM4-201ENST00000300933 IRF9Q00978 393 aa22.28■■□□□ 1.16
TPM4-201ENST00000300933 FSTL4Q6MZW2 842 aa22.28■■□□□ 1.16
TPM4-201ENST00000300933 IZUMO2Q6UXV1 221 aa22.28■■□□□ 1.16
TPM4-201ENST00000300933 TMEM135Q86UB9 458 aa22.28■■□□□ 1.16
TPM4-201ENST00000300933 NUP93Q8N1F7 819 aa22.28■■□□□ 1.16
TPM4-201ENST00000300933 SKA1Q96BD8 255 aa22.28■■□□□ 1.16
TPM4-201ENST00000300933 SEPT5Q99719 369 aaPredicted RBP22.28■■□□□ 1.16
TPM4-201ENST00000300933 SIRPGQ9P1W8 387 aa22.28■■□□□ 1.16
TPM4-201ENST00000300933 TRHDEQ9UKU6 1024 aa22.28■■□□□ 1.16
TPM4-201ENST00000300933 CABYRO75952 493 aa22.27■■□□□ 1.16
TPM4-201ENST00000300933 BAG2O95816 211 aa22.27■■□□□ 1.16
TPM4-201ENST00000300933 LYNP07948 512 aa22.27■■□□□ 1.16
TPM4-201ENST00000300933 MAXP61244 160 aa22.27■■□□□ 1.16
TPM4-201ENST00000300933 ITPRIPL1Q6GPH6 555 aa22.27■■□□□ 1.16
TPM4-201ENST00000300933 TAS1R1Q7RTX1 841 aa22.27■■□□□ 1.16
TPM4-201ENST00000300933 ARHGAP22Q7Z5H3 698 aa22.27■■□□□ 1.16
TPM4-201ENST00000300933 TUBGCP5Q96RT8 1024 aa22.27■■□□□ 1.16
TPM4-201ENST00000300933 TTC1Q99614 292 aa22.27■■□□□ 1.16
TPM4-201ENST00000300933 RBM22Q9NW64 420 aaKnown RBP eCLIP22.27■■□□□ 1.16
TPM4-201ENST00000300933 ZNF212Q9UDV6 495 aa22.27■■□□□ 1.16
TPM4-201ENST00000300933 B2RBV5 119 aa22.27■■□□□ 1.16
TPM4-201ENST00000300933 RANBP1P43487 201 aa22.27■■□□□ 1.16
TPM4-201ENST00000300933 DEFB115Q30KQ5 88 aa22.27■■□□□ 1.16
TPM4-201ENST00000300933 SPANXN3Q5MJ09 141 aa22.27■■□□□ 1.16
TPM4-201ENST00000300933 TEDDM1Q5T9Z0 273 aa22.27■■□□□ 1.16
TPM4-201ENST00000300933 CYS1Q717R9 158 aa22.27■■□□□ 1.16
TPM4-201ENST00000300933 ZNF354CQ86Y25 554 aa22.27■■□□□ 1.16
TPM4-201ENST00000300933 KLHL5Q96PQ7 755 aa22.27■■□□□ 1.16
TPM4-201ENST00000300933 HAPLN3Q96S86 360 aa22.27■■□□□ 1.16
TPM4-201ENST00000300933 NAT9Q9BTE0 207 aa22.27■■□□□ 1.16
TPM4-201ENST00000300933 NMUR2Q9GZQ4 415 aa22.27■■□□□ 1.16
TPM4-201ENST00000300933 SNX15Q9NRS6 342 aa22.27■■□□□ 1.16
TPM4-201ENST00000300933 FCHO1O14526 889 aa22.26■■□□□ 1.15
TPM4-201ENST00000300933 HLA-DQB2P05538 268 aa22.26■■□□□ 1.15
TPM4-201ENST00000300933 ETS2P15036 469 aa22.26■■□□□ 1.15
TPM4-201ENST00000300933 CPB1P15086 417 aa22.26■■□□□ 1.15
TPM4-201ENST00000300933 GP5P40197 560 aa22.26■■□□□ 1.15
TPM4-201ENST00000300933 MGAT5BQ3V5L5 792 aa22.26■■□□□ 1.15
TPM4-201ENST00000300933 ALFQ53S48 1182 aa22.26■■□□□ 1.15
TPM4-201ENST00000300933 LRRC8DQ7L1W4 858 aa22.26■■□□□ 1.15
TPM4-201ENST00000300933 KCNMB4Q86W47 210 aa22.26■■□□□ 1.15
TPM4-201ENST00000300933 FICDQ9BVA6 458 aa22.26■■□□□ 1.15
TPM4-201ENST00000300933 UNKQ9C0B0 810 aaKnown RBP22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms