RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 PLIN3O60664 434 aa14.8□□□□□ -0.04
SMG8-201ENST00000300917 OR1E1P30953 314 aa14.8□□□□□ -0.04
SMG8-201ENST00000300917 SPRP35270 261 aaPredicted RBP14.8□□□□□ -0.04
SMG8-201ENST00000300917 CCR10P46092 362 aa14.8□□□□□ -0.04
SMG8-201ENST00000300917 WNT3AP56704 352 aa14.8□□□□□ -0.04
SMG8-201ENST00000300917 PTPRCAPQ14761 206 aa14.8□□□□□ -0.04
SMG8-201ENST00000300917 VWA5B1Q5TIE3 1220 aa14.8□□□□□ -0.04
SMG8-201ENST00000300917 CCNJLQ8IV13 435 aa14.8□□□□□ -0.04
SMG8-201ENST00000300917 SLC41A1Q8IVJ1 513 aa14.8□□□□□ -0.04
SMG8-201ENST00000300917 GPATCH11Q8N954 259 aa14.8□□□□□ -0.04
SMG8-201ENST00000300917 SLAIN1Q8ND83 568 aa14.8□□□□□ -0.04
SMG8-201ENST00000300917 C8orf48Q96LL4 319 aa14.8□□□□□ -0.04
SMG8-201ENST00000300917 VAT1Q99536 393 aa14.8□□□□□ -0.04
SMG8-201ENST00000300917 CPNE1Q99829 537 aa14.8□□□□□ -0.04
SMG8-201ENST00000300917 TSEN34Q9BSV6 310 aaKnown RBP14.8□□□□□ -0.04
SMG8-201ENST00000300917 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.8□□□□□ -0.04
SMG8-201ENST00000300917 FNDC3AQ9Y2H6 1198 aaKnown RBP14.8□□□□□ -0.04
SMG8-201ENST00000300917 SYN3O14994 580 aa14.8□□□□□ -0.04
SMG8-201ENST00000300917 FGF10O15520 208 aaPredicted RBP14.8□□□□□ -0.04
SMG8-201ENST00000300917 TSPAN3O60637 253 aa14.8□□□□□ -0.04
SMG8-201ENST00000300917 USP1O94782 785 aa14.8□□□□□ -0.04
SMG8-201ENST00000300917 HAUS5O94927 633 aa14.8□□□□□ -0.04
SMG8-201ENST00000300917 GJB5O95377 273 aa14.8□□□□□ -0.04
SMG8-201ENST00000300917 USP10Q14694 798 aaKnown RBP14.8□□□□□ -0.04
SMG8-201ENST00000300917 ATG16L1Q676U5 607 aa14.8□□□□□ -0.04
SMG8-201ENST00000300917 CCDC91Q7Z6B0 441 aa14.8□□□□□ -0.04
SMG8-201ENST00000300917 CRLF3Q8IUI8 442 aa14.8□□□□□ -0.04
SMG8-201ENST00000300917 SLC43A3Q8NBI5 491 aa14.8□□□□□ -0.04
SMG8-201ENST00000300917 FUBP3Q96I24 572 aaKnown RBP eCLIP14.8□□□□□ -0.042e-10■■■■■ 65.8
SMG8-201ENST00000300917 TTPALQ9BTX7 342 aa14.8□□□□□ -0.04
SMG8-201ENST00000300917 ZYG11BQ9C0D3 744 aa14.8□□□□□ -0.04
SMG8-201ENST00000300917 TLR8Q9NR97 1041 aaKnown RBP14.8□□□□□ -0.04
SMG8-201ENST00000300917 PNPOQ9NVS9 261 aa14.8□□□□□ -0.04
SMG8-201ENST00000300917 C2P06681 752 aa14.79□□□□□ -0.04
SMG8-201ENST00000300917 SPATA31D3P0C874 917 aa14.79□□□□□ -0.04
SMG8-201ENST00000300917 ATF6P18850 670 aa14.79□□□□□ -0.04
SMG8-201ENST00000300917 ALDH7A1P49419 539 aaKnown RBP14.79□□□□□ -0.04
SMG8-201ENST00000300917 SPATA31D4Q6ZUB0 917 aa14.79□□□□□ -0.04
SMG8-201ENST00000300917 LGI2Q8N0V4 545 aa14.79□□□□□ -0.04
SMG8-201ENST00000300917 FBXO22Q8NEZ5 403 aa14.79□□□□□ -0.04
SMG8-201ENST00000300917 DPF3Q92784 378 aa14.79□□□□□ -0.04
SMG8-201ENST00000300917 SCYL1Q96KG9 808 aa14.79□□□□□ -0.04
SMG8-201ENST00000300917 NDNQ99608 321 aa14.79□□□□□ -0.04
SMG8-201ENST00000300917 AAR2Q9Y312 384 aaKnown RBP14.79□□□□□ -0.04
SMG8-201ENST00000300917 RAD54BQ9Y620 910 aa14.79□□□□□ -0.04
SMG8-201ENST00000300917 A0A0D9SEW6 157 aa14.79□□□□□ -0.04
SMG8-201ENST00000300917 FCHO1O14526 889 aa14.79□□□□□ -0.04
SMG8-201ENST00000300917 GLRA3O75311 464 aa14.79□□□□□ -0.04
SMG8-201ENST00000300917 IHHQ14623 411 aa14.79□□□□□ -0.04
SMG8-201ENST00000300917 ARTNQ5T4W7 220 aa14.79□□□□□ -0.04
SMG8-201ENST00000300917 NPAS4Q8IUM7 802 aa14.79□□□□□ -0.04
SMG8-201ENST00000300917 UTP4Q969X6 686 aaKnown RBP14.79□□□□□ -0.04
SMG8-201ENST00000300917 SLC39A13Q96H72 371 aa14.79□□□□□ -0.04
SMG8-201ENST00000300917 MRGPRX2Q96LB1 330 aa14.79□□□□□ -0.04
SMG8-201ENST00000300917 NOD2Q9HC29 1040 aa14.79□□□□□ -0.04
SMG8-201ENST00000300917 TXLNGQ9NUQ3 528 aa14.79□□□□□ -0.04
SMG8-201ENST00000300917 SIRPGQ9P1W8 387 aa14.79□□□□□ -0.04
SMG8-201ENST00000300917 SOX13Q9UN79 622 aa14.79□□□□□ -0.04
SMG8-201ENST00000300917 KCTD3Q9Y597 815 aa14.79□□□□□ -0.04
SMG8-201ENST00000300917 MYO7AQ13402 2215 aa14.79□□□□□ -0.04
SMG8-201ENST00000300917 OR51F1A6NGY5 319 aa14.79□□□□□ -0.04
SMG8-201ENST00000300917 TK2O00142 265 aa14.79□□□□□ -0.04
SMG8-201ENST00000300917 ATP6V1G2O95670 118 aa14.79□□□□□ -0.04
SMG8-201ENST00000300917 GSRP00390 522 aa14.79□□□□□ -0.04
SMG8-201ENST00000300917 AHSGP02765 367 aa14.79□□□□□ -0.04
SMG8-201ENST00000300917 ENO1P06733 434 aaKnown RBP14.79□□□□□ -0.04
SMG8-201ENST00000300917 ARRB2P32121 409 aa14.79□□□□□ -0.04
SMG8-201ENST00000300917 NPY2RP49146 381 aa14.79□□□□□ -0.04
SMG8-201ENST00000300917 PCLAFQ15004 111 aa14.79□□□□□ -0.04
SMG8-201ENST00000300917 HSF5Q4G112 596 aaPredicted RBP14.79□□□□□ -0.04
SMG8-201ENST00000300917 MARC1Q5VT66 337 aa14.79□□□□□ -0.04
SMG8-201ENST00000300917 ZNF470Q6ECI4 717 aa14.79□□□□□ -0.04
SMG8-201ENST00000300917 DENND5AQ6IQ26 1287 aa14.79□□□□□ -0.04
SMG8-201ENST00000300917 LONP2Q86WA8 852 aa14.79□□□□□ -0.04
SMG8-201ENST00000300917 IL12RB2Q99665 862 aa14.79□□□□□ -0.04
SMG8-201ENST00000300917 TASP1Q9H6P5 420 aa14.79□□□□□ -0.04
SMG8-201ENST00000300917 G3BP2Q9UN86 482 aaKnown RBP14.79□□□□□ -0.04
SMG8-201ENST00000300917 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.79□□□□□ -0.04
SMG8-201ENST00000300917 ANXA9O76027 345 aa14.78□□□□□ -0.04
SMG8-201ENST00000300917 GABRB3P28472 473 aa14.78□□□□□ -0.04
SMG8-201ENST00000300917 LIMK2P53671 638 aa14.78□□□□□ -0.04
SMG8-201ENST00000300917 RPS24P62847 133 aaKnown RBP14.78□□□□□ -0.04
SMG8-201ENST00000300917 KDSRQ06136 332 aa14.78□□□□□ -0.04
SMG8-201ENST00000300917 TAF12Q16514 161 aa14.78□□□□□ -0.04
SMG8-201ENST00000300917 GRTP1Q5TC63 336 aa14.78□□□□□ -0.04
SMG8-201ENST00000300917 PTAR1Q7Z6K3 402 aaPredicted RBP14.78□□□□□ -0.04
SMG8-201ENST00000300917 OMDQ99983 421 aa14.78□□□□□ -0.04
SMG8-201ENST00000300917 PHF24Q9UPV7 400 aa14.78□□□□□ -0.04
SMG8-201ENST00000300917 TMEM189-UBE2V1I3L0A0 370 aa14.78□□□□□ -0.04
SMG8-201ENST00000300917 INPPL1O15357 1258 aa14.78□□□□□ -0.04
SMG8-201ENST00000300917 FGFR3P22607 806 aa14.78□□□□□ -0.04
SMG8-201ENST00000300917 SLC1A6P48664 564 aa14.78□□□□□ -0.04
SMG8-201ENST00000300917 TLE2Q04725 743 aa14.78□□□□□ -0.04
SMG8-201ENST00000300917 USP4Q13107 963 aa14.78□□□□□ -0.04
SMG8-201ENST00000300917 GPR17Q13304 367 aa14.78□□□□□ -0.04
SMG8-201ENST00000300917 POLD3Q15054 466 aaPredicted RBP14.78□□□□□ -0.04
SMG8-201ENST00000300917 ZNF789Q5FWF6 425 aa14.78□□□□□ -0.04
SMG8-201ENST00000300917 IL31Q6EBC2 164 aa14.78□□□□□ -0.04
SMG8-201ENST00000300917 DENND1CQ8IV53 801 aa14.78□□□□□ -0.04
SMG8-201ENST00000300917 SCML4Q8N228 414 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms