RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 EPHA3P29320 983 aa13.11□□□□□ -0.31
HIF3A-204ENST00000300862 CXCR3P49682 368 aa13.11□□□□□ -0.31
HIF3A-204ENST00000300862 GJA9P57773 515 aa13.11□□□□□ -0.31
HIF3A-204ENST00000300862 MPP1Q00013 466 aa13.11□□□□□ -0.31
HIF3A-204ENST00000300862 USP10Q14694 798 aaKnown RBP13.11□□□□□ -0.31
HIF3A-204ENST00000300862 FSCN1Q16658 493 aaKnown RBP13.11□□□□□ -0.31
HIF3A-204ENST00000300862 SPRYD7Q5W111 196 aa13.11□□□□□ -0.31
HIF3A-204ENST00000300862 ITPRIPL1Q6GPH6 555 aa13.11□□□□□ -0.31
HIF3A-204ENST00000300862 EPGNQ6UW88 154 aa13.11□□□□□ -0.31
HIF3A-204ENST00000300862 SLC41A1Q8IVJ1 513 aa13.11□□□□□ -0.31
HIF3A-204ENST00000300862 ISL2Q96A47 359 aa13.11□□□□□ -0.31
HIF3A-204ENST00000300862 GBP5Q96PP8 586 aa13.11□□□□□ -0.31
HIF3A-204ENST00000300862 ACE2Q9BYF1 805 aaPredicted RBP13.11□□□□□ -0.31
HIF3A-204ENST00000300862 IL22Q9GZX6 179 aa13.11□□□□□ -0.31
HIF3A-204ENST00000300862 CDH22Q9UJ99 828 aa13.11□□□□□ -0.31
HIF3A-204ENST00000300862 TRHDEQ9UKU6 1024 aa13.11□□□□□ -0.31
HIF3A-204ENST00000300862 CDY1Q9Y6F8 540 aa13.11□□□□□ -0.31
HIF3A-204ENST00000300862 MSI1O43347 362 aaKnown RBP13.11□□□□□ -0.31
HIF3A-204ENST00000300862 B3GAT3O94766 335 aa13.11□□□□□ -0.31
HIF3A-204ENST00000300862 VAPBO95292 243 aa13.11□□□□□ -0.31
HIF3A-204ENST00000300862 GSTT1P30711 240 aa13.11□□□□□ -0.31
HIF3A-204ENST00000300862 HCAR3P49019 387 aa13.11□□□□□ -0.31
HIF3A-204ENST00000300862 CDK7P50613 346 aa13.11□□□□□ -0.31
HIF3A-204ENST00000300862 NAGLUP54802 743 aa13.11□□□□□ -0.31
HIF3A-204ENST00000300862 CCNIQ14094 377 aa13.11□□□□□ -0.31
HIF3A-204ENST00000300862 PPM1LQ5SGD2 360 aa13.11□□□□□ -0.31
HIF3A-204ENST00000300862 MORN1Q5T089 497 aa13.11□□□□□ -0.31
HIF3A-204ENST00000300862 LPCAT4Q643R3 524 aa13.11□□□□□ -0.31
HIF3A-204ENST00000300862 ZC3HC1Q86WB0 502 aaKnown RBP13.11□□□□□ -0.31
HIF3A-204ENST00000300862 DQX1Q8TE96 717 aaKnown RBP13.11□□□□□ -0.31
HIF3A-204ENST00000300862 CMTM5Q96DZ9 223 aa13.11□□□□□ -0.31
HIF3A-204ENST00000300862 SMARCD1Q96GM5 515 aa13.11□□□□□ -0.31
HIF3A-204ENST00000300862 LENG8Q96PV6 779 aaPredicted RBP13.11□□□□□ -0.31
HIF3A-204ENST00000300862 NR1H4Q96RI1 486 aaPredicted RBP13.11□□□□□ -0.31
HIF3A-204ENST00000300862 NDFIP2Q9NV92 336 aa13.11□□□□□ -0.31
HIF3A-204ENST00000300862 SLC2A6Q9UGQ3 507 aa13.11□□□□□ -0.31
HIF3A-204ENST00000300862 SFMBT1Q9UHJ3 866 aa13.11□□□□□ -0.31
HIF3A-204ENST00000300862 GLTPD2A6NH11 291 aa13.1□□□□□ -0.31
HIF3A-204ENST00000300862 F8W810 466 aa13.1□□□□□ -0.31
HIF3A-204ENST00000300862 TIMM44O43615 452 aa13.1□□□□□ -0.31
HIF3A-204ENST00000300862 AHSGP02765 367 aa13.1□□□□□ -0.31
HIF3A-204ENST00000300862 MPOP05164 745 aa13.1□□□□□ -0.31
HIF3A-204ENST00000300862 SBK3P0C264 359 aa13.1□□□□□ -0.31
HIF3A-204ENST00000300862 COX4I1P13073 169 aa13.1□□□□□ -0.31
HIF3A-204ENST00000300862 GRIA4P48058 902 aa13.1□□□□□ -0.31
HIF3A-204ENST00000300862 NPY2RP49146 381 aa13.1□□□□□ -0.31
HIF3A-204ENST00000300862 AIF1P55008 147 aa13.1□□□□□ -0.31
HIF3A-204ENST00000300862 PURAQ00577 322 aaKnown RBP13.1□□□□□ -0.31
HIF3A-204ENST00000300862 CDH17Q12864 832 aa13.1□□□□□ -0.31
HIF3A-204ENST00000300862 KLF10Q13118 480 aa13.1□□□□□ -0.31
HIF3A-204ENST00000300862 CNPY1Q3B7I2 92 aa13.1□□□□□ -0.31
HIF3A-204ENST00000300862 ESRP1Q6NXG1 681 aaKnown RBP13.1□□□□□ -0.31
HIF3A-204ENST00000300862 AGMOQ6ZNB7 445 aa13.1□□□□□ -0.31
HIF3A-204ENST00000300862 DRAXINQ8NBI3 349 aaPredicted RBP13.1□□□□□ -0.31
HIF3A-204ENST00000300862 PGAP3Q96FM1 320 aaPredicted RBP13.1□□□□□ -0.31
HIF3A-204ENST00000300862 MARK4Q96L34 752 aa13.1□□□□□ -0.31
HIF3A-204ENST00000300862 OMDQ99983 421 aa13.1□□□□□ -0.31
HIF3A-204ENST00000300862 NUF2Q9BZD4 464 aa13.1□□□□□ -0.31
HIF3A-204ENST00000300862 S100A14Q9HCY8 104 aa13.1□□□□□ -0.31
HIF3A-204ENST00000300862 TLK1Q9UKI8 766 aa13.1□□□□□ -0.31
HIF3A-204ENST00000300862 CDH9Q9ULB4 789 aa13.1□□□□□ -0.31
HIF3A-204ENST00000300862 RUVBL2Q9Y230 463 aaKnown RBP13.1□□□□□ -0.31
HIF3A-204ENST00000300862 AIM2O14862 343 aa13.1□□□□□ -0.31
HIF3A-204ENST00000300862 PMPCBO75439 489 aa13.1□□□□□ -0.31
HIF3A-204ENST00000300862 F9P00740 461 aa13.1□□□□□ -0.31
HIF3A-204ENST00000300862 JUNP05412 331 aaKnown RBP13.1□□□□□ -0.31
HIF3A-204ENST00000300862 SERPINB6P35237 376 aa13.1□□□□□ -0.31
HIF3A-204ENST00000300862 MRPS6P82932 125 aaKnown RBP13.1□□□□□ -0.31
HIF3A-204ENST00000300862 DSG1Q02413 1049 aa13.1□□□□□ -0.31
HIF3A-204ENST00000300862 TBL3Q12788 808 aaKnown RBP13.1□□□□□ -0.31
HIF3A-204ENST00000300862 CDC16Q13042 620 aa13.1□□□□□ -0.31
HIF3A-204ENST00000300862 ARL13AQ5H913 290 aaPredicted RBP13.1□□□□□ -0.31
HIF3A-204ENST00000300862 TMEM198Q66K66 360 aa13.1□□□□□ -0.31
HIF3A-204ENST00000300862 ZNF280DQ6N043 979 aa13.1□□□□□ -0.31
HIF3A-204ENST00000300862 CXCL17Q6UXB2 119 aa13.1□□□□□ -0.31
HIF3A-204ENST00000300862 LRRTM3Q86VH5 581 aa13.1□□□□□ -0.31
HIF3A-204ENST00000300862 TMEM151AQ8N4L1 468 aa13.1□□□□□ -0.31
HIF3A-204ENST00000300862 EZH1Q92800 747 aaPredicted RBP13.1□□□□□ -0.31
HIF3A-204ENST00000300862 SGF29Q96ES7 293 aa13.1□□□□□ -0.31
HIF3A-204ENST00000300862 TSPAN18Q96SJ8 248 aa13.1□□□□□ -0.31
HIF3A-204ENST00000300862 ECSITQ9BQ95 431 aa13.1□□□□□ -0.31
HIF3A-204ENST00000300862 AGO3Q9H9G7 860 aaKnown RBP13.1□□□□□ -0.31
HIF3A-204ENST00000300862 TCF7L2Q9NQB0 619 aa13.1□□□□□ -0.31
HIF3A-204ENST00000300862 SLC38A7Q9NVC3 462 aa13.1□□□□□ -0.31
HIF3A-204ENST00000300862 OXSMQ9NWU1 459 aa13.1□□□□□ -0.31
HIF3A-204ENST00000300862 ERI2A8K979 691 aaKnown RBP13.09□□□□□ -0.31
HIF3A-204ENST00000300862 MTSS1O43312 755 aa13.09□□□□□ -0.31
HIF3A-204ENST00000300862 PIGNO95427 931 aa13.09□□□□□ -0.31
HIF3A-204ENST00000300862 MSX2P35548 267 aaPredicted RBP13.09□□□□□ -0.31
HIF3A-204ENST00000300862 NUMBP49757 651 aa13.09□□□□□ -0.31
HIF3A-204ENST00000300862 ASPHQ12797 758 aa13.09□□□□□ -0.31
HIF3A-204ENST00000300862 PRPSAP1Q14558 356 aa13.09□□□□□ -0.31
HIF3A-204ENST00000300862 ANO4Q32M45 955 aa13.09□□□□□ -0.31
HIF3A-204ENST00000300862 NOMO2Q5JPE7 1267 aa13.09□□□□□ -0.31
HIF3A-204ENST00000300862 TMCO4Q5TGY1 634 aa13.09□□□□□ -0.31
HIF3A-204ENST00000300862 PM20D1Q6GTS8 502 aa13.09□□□□□ -0.31
HIF3A-204ENST00000300862 NAPEPLDQ6IQ20 393 aa13.09□□□□□ -0.31
HIF3A-204ENST00000300862 CEP97Q8IW35 865 aa13.09□□□□□ -0.31
HIF3A-204ENST00000300862 MFSD6LQ8IWD5 586 aa13.09□□□□□ -0.31
HIF3A-204ENST00000300862 TMEM86AQ8N2M4 240 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms