RNA–Protein interactions for RNA: ENST00000296794.10

ARHGEF28-201, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 5 BASIC

Gene ARHGEF28, Length 5,246 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-201ENST00000296794 BDNFP23560 247 aa16.25■□□□□ 0.19
ARHGEF28-201ENST00000296794 CHI3L1P36222 383 aaPredicted RBP16.25■□□□□ 0.19
ARHGEF28-201ENST00000296794 PTGIRP43119 386 aa16.25■□□□□ 0.19
ARHGEF28-201ENST00000296794 NEK3P51956 506 aa16.25■□□□□ 0.19
ARHGEF28-201ENST00000296794 ZNF572Q7Z3I7 529 aaPredicted RBP16.25■□□□□ 0.19
ARHGEF28-201ENST00000296794 DSG4Q86SJ6 1040 aa16.25■□□□□ 0.19
ARHGEF28-201ENST00000296794 CAMK1DQ8IU85 385 aa16.25■□□□□ 0.19
ARHGEF28-201ENST00000296794 FIBCD1Q8N539 461 aa16.25■□□□□ 0.19
ARHGEF28-201ENST00000296794 NMUR2Q9GZQ4 415 aa16.25■□□□□ 0.19
ARHGEF28-201ENST00000296794 SF3B1O75533 1304 aaKnown RBP eCLIP16.25■□□□□ 0.193e-9■■■■■ 206.8
ARHGEF28-201ENST00000296794 MGAT4DA6NG13 374 aa16.25■□□□□ 0.19
ARHGEF28-201ENST00000296794 LTA4HP09960 611 aaKnown RBP16.25■□□□□ 0.19
ARHGEF28-201ENST00000296794 GRIA3P42263 894 aa16.25■□□□□ 0.19
ARHGEF28-201ENST00000296794 KRR1Q13601 381 aaKnown RBP16.25■□□□□ 0.19
ARHGEF28-201ENST00000296794 BNIPLQ7Z465 357 aa16.25■□□□□ 0.19
ARHGEF28-201ENST00000296794 C11orf96Q7Z7L8 435 aa16.25■□□□□ 0.19
ARHGEF28-201ENST00000296794 ZCCHC7Q8N3Z6 543 aaKnown RBP16.25■□□□□ 0.19
ARHGEF28-201ENST00000296794 HSFY1Q96LI6 401 aa16.25■□□□□ 0.19
ARHGEF28-201ENST00000296794 RAP2CQ9Y3L5 183 aa16.25■□□□□ 0.19
ARHGEF28-201ENST00000296794 ADCY6O43306 1168 aa16.25■□□□□ 0.19
ARHGEF28-201ENST00000296794 ATP5F1P24539 256 aaPredicted RBP16.25■□□□□ 0.19
ARHGEF28-201ENST00000296794 EPHA3P29320 983 aa16.25■□□□□ 0.19
ARHGEF28-201ENST00000296794 SERPINH1P50454 418 aaKnown RBP16.25■□□□□ 0.19
ARHGEF28-201ENST00000296794 C21orf59P57076 290 aa16.25■□□□□ 0.19
ARHGEF28-201ENST00000296794 ROR2Q01974 943 aaKnown RBP16.25■□□□□ 0.19
ARHGEF28-201ENST00000296794 PACS1Q6VY07 963 aa16.25■□□□□ 0.19
ARHGEF28-201ENST00000296794 TSPAN14Q8NG11 270 aa16.25■□□□□ 0.19
ARHGEF28-201ENST00000296794 RP9Q8TA86 221 aaKnown RBP16.25■□□□□ 0.19
ARHGEF28-201ENST00000296794 KCTD4Q8WVF5 259 aa16.25■□□□□ 0.19
ARHGEF28-201ENST00000296794 SLC44A1Q8WWI5 657 aa16.25■□□□□ 0.19
ARHGEF28-201ENST00000296794 UGT2B28Q9BY64 529 aa16.25■□□□□ 0.19
ARHGEF28-201ENST00000296794 SNX15Q9NRS6 342 aa16.25■□□□□ 0.19
ARHGEF28-201ENST00000296794 PNPOQ9NVS9 261 aa16.25■□□□□ 0.19
ARHGEF28-201ENST00000296794 TMCC3Q9ULS5 477 aa16.25■□□□□ 0.19
ARHGEF28-201ENST00000296794 SPACA6W5XKT8 324 aa16.25■□□□□ 0.19
ARHGEF28-201ENST00000296794 C15orf38-AP3S2A0A0A6YYH1 394 aa16.25■□□□□ 0.19
ARHGEF28-201ENST00000296794 GNG14A0A1W2PPG7 69 aa16.25■□□□□ 0.19
ARHGEF28-201ENST00000296794 CNOT3O75175 753 aaKnown RBP16.25■□□□□ 0.19
ARHGEF28-201ENST00000296794 BPGMP07738 259 aa16.25■□□□□ 0.19
ARHGEF28-201ENST00000296794 OCM2P0CE71 109 aa16.25■□□□□ 0.19
ARHGEF28-201ENST00000296794 OCMP0CE72 109 aaPredicted RBP16.25■□□□□ 0.19
ARHGEF28-201ENST00000296794 CCDC166P0CW27 439 aa16.25■□□□□ 0.19
ARHGEF28-201ENST00000296794 RRM2P31350 389 aa16.25■□□□□ 0.19
ARHGEF28-201ENST00000296794 RPL5P46777 297 aaKnown RBP16.25■□□□□ 0.19
ARHGEF28-201ENST00000296794 HPCAP84074 193 aa16.25■□□□□ 0.19
ARHGEF28-201ENST00000296794 ILF2Q12905 390 aaKnown RBP16.25■□□□□ 0.19
ARHGEF28-201ENST00000296794 CAMK2GQ13555 558 aaPredicted RBP16.25■□□□□ 0.19
ARHGEF28-201ENST00000296794 FASTKD3Q14CZ7 662 aaKnown RBP16.25■□□□□ 0.19
ARHGEF28-201ENST00000296794 PTPN20Q4JDL3 420 aa16.25■□□□□ 0.19
ARHGEF28-201ENST00000296794 AAGABQ6PD74 315 aa16.25■□□□□ 0.19
ARHGEF28-201ENST00000296794 ARPINQ7Z6K5 226 aa16.25■□□□□ 0.19
ARHGEF28-201ENST00000296794 ITFG1Q8TB96 612 aa16.25■□□□□ 0.19
ARHGEF28-201ENST00000296794 UROC1Q96N76 676 aa16.25■□□□□ 0.19
ARHGEF28-201ENST00000296794 SFMBT1Q9UHJ3 866 aa16.25■□□□□ 0.19
ARHGEF28-201ENST00000296794 FBXL21Q9UKT6 434 aa16.25■□□□□ 0.19
ARHGEF28-201ENST00000296794 RPTORQ8N122 1335 aa16.25■□□□□ 0.19
ARHGEF28-201ENST00000296794 SPATA31C2B4DYI2 1134 aa16.24■□□□□ 0.19
ARHGEF28-201ENST00000296794 FAM20BO75063 409 aa16.24■□□□□ 0.19
ARHGEF28-201ENST00000296794 PTPN1P18031 435 aaKnown RBP16.24■□□□□ 0.19
ARHGEF28-201ENST00000296794 MAD2L1Q13257 205 aaPredicted RBP16.24■□□□□ 0.19
ARHGEF28-201ENST00000296794 GJC2Q5T442 439 aaPredicted RBP16.24■□□□□ 0.19
ARHGEF28-201ENST00000296794 ERAP2Q6P179 960 aa16.24■□□□□ 0.19
ARHGEF28-201ENST00000296794 RCN3Q96D15 328 aa16.24■□□□□ 0.19
ARHGEF28-201ENST00000296794 OMDQ99983 421 aa16.24■□□□□ 0.19
ARHGEF28-201ENST00000296794 RERGLQ9H628 205 aa16.24■□□□□ 0.19
ARHGEF28-201ENST00000296794 SYBUQ9NX95 663 aa16.24■□□□□ 0.19
ARHGEF28-201ENST00000296794 PTGES3LE9PB15 166 aa16.24■□□□□ 0.19
ARHGEF28-201ENST00000296794 ZNF862O60290 1169 aa16.24■□□□□ 0.19
ARHGEF28-201ENST00000296794 SNRPB2P08579 225 aaKnown RBP16.24■□□□□ 0.19
ARHGEF28-201ENST00000296794 PAX3P23760 479 aa16.24■□□□□ 0.19
ARHGEF28-201ENST00000296794 CDC16Q13042 620 aa16.24■□□□□ 0.19
ARHGEF28-201ENST00000296794 NOMO2Q5JPE7 1267 aa16.24■□□□□ 0.19
ARHGEF28-201ENST00000296794 ANKRD23Q86SG2 305 aa16.24■□□□□ 0.19
ARHGEF28-201ENST00000296794 C12orf50Q8NA57 414 aaPredicted RBP16.24■□□□□ 0.19
ARHGEF28-201ENST00000296794 ANAPC2Q9UJX6 822 aa16.24■□□□□ 0.19
ARHGEF28-201ENST00000296794 C2orf71A6NGG8 1288 aa16.24■□□□□ 0.19
ARHGEF28-201ENST00000296794 TRIM38O00635 465 aa16.24■□□□□ 0.19
ARHGEF28-201ENST00000296794 RAD51BO15315 384 aa16.24■□□□□ 0.19
ARHGEF28-201ENST00000296794 ALOX15P16050 662 aaPredicted RBP16.24■□□□□ 0.19
ARHGEF28-201ENST00000296794 LBPP18428 481 aa16.24■□□□□ 0.19
ARHGEF28-201ENST00000296794 SGCGQ13326 291 aa16.24■□□□□ 0.19
ARHGEF28-201ENST00000296794 SQLEQ14534 574 aa16.24■□□□□ 0.19
ARHGEF28-201ENST00000296794 ASTE1Q2TB18 679 aaPredicted RBP16.24■□□□□ 0.19
ARHGEF28-201ENST00000296794 MON1BQ7L1V2 547 aa16.24■□□□□ 0.19
ARHGEF28-201ENST00000296794 PIGZQ86VD9 579 aa16.24■□□□□ 0.19
ARHGEF28-201ENST00000296794 ZDHHC13Q8IUH4 622 aa16.24■□□□□ 0.19
ARHGEF28-201ENST00000296794 SEMA4BQ9NPR2 832 aaPredicted RBP16.24■□□□□ 0.19
ARHGEF28-201ENST00000296794 SLC9A3R1O14745 358 aaPredicted RBP16.24■□□□□ 0.19
ARHGEF28-201ENST00000296794 HOXB8P17481 243 aaPredicted RBP16.24■□□□□ 0.19
ARHGEF28-201ENST00000296794 FMO4P31512 558 aa16.24■□□□□ 0.19
ARHGEF28-201ENST00000296794 PFKFB4Q16877 469 aa16.24■□□□□ 0.19
ARHGEF28-201ENST00000296794 HOMEZQ8IX15 550 aa16.24■□□□□ 0.19
ARHGEF28-201ENST00000296794 C12orf29Q8N999 325 aa16.24■□□□□ 0.19
ARHGEF28-201ENST00000296794 RORBQ92753 470 aa16.24■□□□□ 0.19
ARHGEF28-201ENST00000296794 HGH1Q9BTY7 390 aa16.24■□□□□ 0.19
ARHGEF28-201ENST00000296794 OSGEPL1Q9H4B0 414 aa16.24■□□□□ 0.19
ARHGEF28-201ENST00000296794 GRHL1Q9NZI5 618 aa16.24■□□□□ 0.19
ARHGEF28-201ENST00000296794 COMMD3-BMI1R4GMX3 469 aa16.24■□□□□ 0.19
ARHGEF28-201ENST00000296794 TCHHQ07283 1943 aa16.24■□□□□ 0.19
ARHGEF28-201ENST00000296794 SMIM31A0A1B0GVY4 71 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms