RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 ZNF618Q5T7W0 954 aa14.93□□□□□ -0.02
CCNF-201ENST00000293968 RWDD4Q6NW29 188 aaKnown RBP14.93□□□□□ -0.02
CCNF-201ENST00000293968 IPMKQ8NFU5 416 aa14.93□□□□□ -0.02
CCNF-201ENST00000293968 NXNL1Q96CM4 212 aa14.93□□□□□ -0.02
CCNF-201ENST00000293968 ATXN3LQ9H3M9 355 aa14.93□□□□□ -0.02
CCNF-201ENST00000293968 HSFX1Q9UBD0 423 aa14.93□□□□□ -0.02
CCNF-201ENST00000293968 TBC1D30Q9Y2I9 924 aa14.93□□□□□ -0.02
CCNF-201ENST00000293968 FOXD2O60548 495 aaPredicted RBP14.93□□□□□ -0.02
CCNF-201ENST00000293968 SETSIPP0DME0 302 aa14.93□□□□□ -0.02
CCNF-201ENST00000293968 ERCC2P18074 760 aa14.93□□□□□ -0.02
CCNF-201ENST00000293968 MGAT5BQ3V5L5 792 aa14.93□□□□□ -0.02
CCNF-201ENST00000293968 CYS1Q717R9 158 aa14.93□□□□□ -0.02
CCNF-201ENST00000293968 PIGZQ86VD9 579 aa14.93□□□□□ -0.02
CCNF-201ENST00000293968 DLG3Q92796 817 aa14.93□□□□□ -0.02
CCNF-201ENST00000293968 PHF21BQ96EK2 531 aa14.93□□□□□ -0.02
CCNF-201ENST00000293968 ZBED3Q96IU2 234 aaPredicted RBP14.93□□□□□ -0.02
CCNF-201ENST00000293968 SLC39A3Q9BRY0 314 aa14.93□□□□□ -0.02
CCNF-201ENST00000293968 DRC3Q9H069 523 aa14.93□□□□□ -0.02
CCNF-201ENST00000293968 MYRFQ9Y2G1 1151 aa14.93□□□□□ -0.02
CCNF-201ENST00000293968 SNX10Q9Y5X0 201 aa14.93□□□□□ -0.02
CCNF-201ENST00000293968 RNF103-CHMP3A0A140T963 221 aa14.93□□□□□ -0.02
CCNF-201ENST00000293968 E7ENX8 843 aa14.93□□□□□ -0.02
CCNF-201ENST00000293968 TRIM38O00635 465 aa14.93□□□□□ -0.02
CCNF-201ENST00000293968 H2AFYO75367 372 aaKnown RBP14.93□□□□□ -0.02
CCNF-201ENST00000293968 PTPN3P26045 913 aa14.93□□□□□ -0.02
CCNF-201ENST00000293968 BAG6P46379 1132 aa14.93□□□□□ -0.02
CCNF-201ENST00000293968 MPP1Q00013 466 aa14.93□□□□□ -0.02
CCNF-201ENST00000293968 FAM219BQ5XKK7 198 aa14.93□□□□□ -0.02
CCNF-201ENST00000293968 ZYG11AQ6WRX3 759 aa14.93□□□□□ -0.02
CCNF-201ENST00000293968 CATSPER4Q7RTX7 472 aa14.93□□□□□ -0.02
CCNF-201ENST00000293968 DENND6AQ8IWF6 608 aa14.93□□□□□ -0.02
CCNF-201ENST00000293968 FAM47BQ8NA70 645 aa14.93□□□□□ -0.02
CCNF-201ENST00000293968 BEST2Q8NFU1 509 aa14.93□□□□□ -0.02
CCNF-201ENST00000293968 LPGAT1Q92604 370 aa14.93□□□□□ -0.02
CCNF-201ENST00000293968 EFHD1Q9BUP0 239 aa14.93□□□□□ -0.02
CCNF-201ENST00000293968 SENP6Q9GZR1 1112 aaPredicted RBP14.93□□□□□ -0.02
CCNF-201ENST00000293968 ERAP1Q9NZ08 941 aa14.93□□□□□ -0.02
CCNF-201ENST00000293968 FZD10Q9ULW2 581 aa14.93□□□□□ -0.02
CCNF-201ENST00000293968 GRID2O43424 1007 aa14.92□□□□□ -0.02
CCNF-201ENST00000293968 MAPK10P53779 464 aa14.92□□□□□ -0.02
CCNF-201ENST00000293968 CSHL1Q14406 222 aa14.92□□□□□ -0.02
CCNF-201ENST00000293968 LPIN1Q14693 890 aa14.92□□□□□ -0.02
CCNF-201ENST00000293968 ACBD5Q5T8D3 534 aaPredicted RBP14.92□□□□□ -0.02
CCNF-201ENST00000293968 HERC6Q8IVU3 1022 aa14.92□□□□□ -0.02
CCNF-201ENST00000293968 ITFG2Q969R8 447 aa14.92□□□□□ -0.02
CCNF-201ENST00000293968 POMKQ9H5K3 350 aa14.92□□□□□ -0.02
CCNF-201ENST00000293968 STAP1Q9ULZ2 295 aa14.92□□□□□ -0.02
CCNF-201ENST00000293968 BCAS2O75934 225 aaPredicted RBP14.92□□□□□ -0.02
CCNF-201ENST00000293968 TOMM70O94826 608 aa14.92□□□□□ -0.02
CCNF-201ENST00000293968 MATKP42679 507 aa14.92□□□□□ -0.02
CCNF-201ENST00000293968 FASTKQ14296 549 aaKnown RBP14.92□□□□□ -0.02
CCNF-201ENST00000293968 KIF19Q2TAC6 998 aa14.92□□□□□ -0.02
CCNF-201ENST00000293968 ZDHHC17Q8IUH5 632 aa14.92□□□□□ -0.02
CCNF-201ENST00000293968 TTC16Q8NEE8 873 aa14.92□□□□□ -0.02
CCNF-201ENST00000293968 SETD4Q9NVD3 440 aa14.92□□□□□ -0.02
CCNF-201ENST00000293968 ADAMTS5Q9UNA0 930 aa14.92□□□□□ -0.02
CCNF-201ENST00000293968 FAM72CH0Y354 149 aa14.92□□□□□ -0.02
CCNF-201ENST00000293968 DFFAO00273 331 aa14.92□□□□□ -0.02
CCNF-201ENST00000293968 FAM72AQ5TYM5 149 aa14.92□□□□□ -0.02
CCNF-201ENST00000293968 SYPL2Q5VXT5 272 aa14.92□□□□□ -0.02
CCNF-201ENST00000293968 FAM72DQ6L9T8 149 aa14.92□□□□□ -0.02
CCNF-201ENST00000293968 FAM72BQ86X60 149 aa14.92□□□□□ -0.02
CCNF-201ENST00000293968 ANKRD52Q8NB46 1076 aa14.92□□□□□ -0.02
CCNF-201ENST00000293968 ZNF696Q9H7X3 374 aa14.92□□□□□ -0.02
CCNF-201ENST00000293968 THSD7AQ9UPZ6 1657 aa14.92□□□□□ -0.02
CCNF-201ENST00000293968 HEATR9A2RTY3 570 aa14.92□□□□□ -0.02
CCNF-201ENST00000293968 FAM149AA5PLN7 773 aa14.92□□□□□ -0.02
CCNF-201ENST00000293968 C9JVG2 144 aa14.92□□□□□ -0.02
CCNF-201ENST00000293968 STT3AP46977 705 aa14.92□□□□□ -0.02
CCNF-201ENST00000293968 RPL26P61254 145 aaKnown RBP14.92□□□□□ -0.02
CCNF-201ENST00000293968 ZNF280DQ6N043 979 aa14.92□□□□□ -0.02
CCNF-201ENST00000293968 RYBPQ8N488 228 aaPredicted RBP14.92□□□□□ -0.02
CCNF-201ENST00000293968 CYGBQ8WWM9 190 aa14.92□□□□□ -0.02
CCNF-201ENST00000293968 SIK2Q9H0K1 926 aa14.92□□□□□ -0.02
CCNF-201ENST00000293968 UPF3AQ9H1J1 476 aaKnown RBP14.92□□□□□ -0.02
CCNF-201ENST00000293968 GOLGA2P5Q9HBQ8 144 aa14.92□□□□□ -0.02
CCNF-201ENST00000293968 ZBTB26Q9HCK0 441 aa14.92□□□□□ -0.02
CCNF-201ENST00000293968 RRN3Q9NYV6 651 aa14.92□□□□□ -0.02
CCNF-201ENST00000293968 IGKV6-21A0A0C4DH24 114 aa14.91□□□□□ -0.02
CCNF-201ENST00000293968 C7orf72A4D263 438 aa14.91□□□□□ -0.02
CCNF-201ENST00000293968 GIPC1O14908 333 aa14.91□□□□□ -0.02
CCNF-201ENST00000293968 DLX3O60479 287 aa14.91□□□□□ -0.02
CCNF-201ENST00000293968 APOA4P06727 396 aa14.91□□□□□ -0.02
CCNF-201ENST00000293968 CDH2P19022 906 aaPredicted RBP14.91□□□□□ -0.02
CCNF-201ENST00000293968 EPHX2P34913 555 aa14.91□□□□□ -0.02
CCNF-201ENST00000293968 SLC12A1Q13621 1099 aa14.91□□□□□ -0.02
CCNF-201ENST00000293968 TTC33Q6PID6 262 aaPredicted RBP14.91□□□□□ -0.02
CCNF-201ENST00000293968 OTOP3Q7RTS5 596 aa14.91□□□□□ -0.02
CCNF-201ENST00000293968 PLPPR4Q7Z2D5 763 aa14.91□□□□□ -0.02
CCNF-201ENST00000293968 CTU1Q7Z7A3 348 aaKnown RBP14.91□□□□□ -0.02
CCNF-201ENST00000293968 EIF2B3Q9NR50 452 aaKnown RBP14.91□□□□□ -0.02
CCNF-201ENST00000293968 AP2A1O95782 977 aa14.91□□□□□ -0.02
CCNF-201ENST00000293968 STMN1P16949 149 aa14.91□□□□□ -0.02
CCNF-201ENST00000293968 GRIA3P42263 894 aa14.91□□□□□ -0.02
CCNF-201ENST00000293968 IFNEQ86WN2 208 aa14.91□□□□□ -0.02
CCNF-201ENST00000293968 ZMAT2Q96NC0 199 aaKnown RBP14.91□□□□□ -0.02
CCNF-201ENST00000293968 EPB41L1Q9H4G0 881 aa14.91□□□□□ -0.02
CCNF-201ENST00000293968 VTI1BQ9UEU0 232 aa14.91□□□□□ -0.02
CCNF-201ENST00000293968 NME7Q9Y5B8 376 aa14.91□□□□□ -0.02
CCNF-201ENST00000293968 V9GYQ6 96 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms