RNA–Protein interactions for RNA: ENST00000293780.4

CHRNE-201, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNE, Length 2,455 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-201ENST00000293780 TMC7Q7Z402 723 aa17.12■□□□□ 0.33
CHRNE-201ENST00000293780 LSMEM2Q8N112 164 aa17.12■□□□□ 0.33
CHRNE-201ENST00000293780 TOP6BLQ8N6T0 577 aa17.12■□□□□ 0.33
CHRNE-201ENST00000293780 KYQ8NBH2 561 aa17.12■□□□□ 0.33
CHRNE-201ENST00000293780 SMG8Q8ND04 991 aaKnown RBP17.12■□□□□ 0.33
CHRNE-201ENST00000293780 SPATA22Q8NHS9 363 aa17.12■□□□□ 0.33
CHRNE-201ENST00000293780 ZFP42Q96MM3 310 aa17.12■□□□□ 0.33
CHRNE-201ENST00000293780 GPR22Q99680 433 aa17.12■□□□□ 0.33
CHRNE-201ENST00000293780 IL22Q9GZX6 179 aa17.12■□□□□ 0.33
CHRNE-201ENST00000293780 PCDHGB4Q9UN71 923 aa17.12■□□□□ 0.33
CHRNE-201ENST00000293780 PSMD13Q9UNM6 376 aa17.12■□□□□ 0.33
CHRNE-201ENST00000293780 DTNAQ9Y4J8 743 aa17.12■□□□□ 0.33
CHRNE-201ENST00000293780 IPPQ9Y573 584 aa17.12■□□□□ 0.33
CHRNE-201ENST00000293780 PCDHGB5Q9Y5G0 923 aa17.12■□□□□ 0.33
CHRNE-201ENST00000293780 MAGEB16A2A368 324 aa17.11■□□□□ 0.33
CHRNE-201ENST00000293780 DPP6P42658 865 aa17.11■□□□□ 0.33
CHRNE-201ENST00000293780 XIAPP98170 497 aa17.11■□□□□ 0.33
CHRNE-201ENST00000293780 MS4A2Q01362 244 aa17.11■□□□□ 0.33
CHRNE-201ENST00000293780 CYLC2Q14093 348 aaPredicted RBP17.11■□□□□ 0.33
CHRNE-201ENST00000293780 GRM2Q14416 872 aa17.11■□□□□ 0.33
CHRNE-201ENST00000293780 SNX17Q15036 470 aa17.11■□□□□ 0.33
CHRNE-201ENST00000293780 PDCD2Q16342 344 aaPredicted RBP17.11■□□□□ 0.33
CHRNE-201ENST00000293780 ARHGAP36Q6ZRI8 547 aa17.11■□□□□ 0.33
CHRNE-201ENST00000293780 DPP9Q86TI2 863 aa17.11■□□□□ 0.33
CHRNE-201ENST00000293780 DENND6AQ8IWF6 608 aa17.11■□□□□ 0.33
CHRNE-201ENST00000293780 PQLC1Q8N2U9 271 aa17.11■□□□□ 0.33
CHRNE-201ENST00000293780 ZMIZ2Q8NF64 920 aa17.11■□□□□ 0.33
CHRNE-201ENST00000293780 ZSCAN18Q8TBC5 510 aaPredicted RBP17.11■□□□□ 0.33
CHRNE-201ENST00000293780 NTAN1Q96AB6 310 aa17.11■□□□□ 0.33
CHRNE-201ENST00000293780 HDAC11Q96DB2 347 aa17.11■□□□□ 0.33
CHRNE-201ENST00000293780 TEKT5Q96M29 485 aa17.11■□□□□ 0.33
CHRNE-201ENST00000293780 SLC9A7Q96T83 725 aa17.11■□□□□ 0.33
CHRNE-201ENST00000293780 OMDQ99983 421 aa17.11■□□□□ 0.33
CHRNE-201ENST00000293780 CENPKQ9BS16 269 aa17.11■□□□□ 0.33
CHRNE-201ENST00000293780 MYBPHLA2RUH7 354 aa17.11■□□□□ 0.33
CHRNE-201ENST00000293780 DYNC1LI2O43237 492 aaPredicted RBP17.11■□□□□ 0.33
CHRNE-201ENST00000293780 SLC35E2BP0CK96 405 aa17.11■□□□□ 0.33
CHRNE-201ENST00000293780 HOXD8P13378 290 aaPredicted RBP17.11■□□□□ 0.33
CHRNE-201ENST00000293780 MPP1Q00013 466 aa17.11■□□□□ 0.33
CHRNE-201ENST00000293780 GALNT2Q10471 571 aa17.11■□□□□ 0.33
CHRNE-201ENST00000293780 SCAPQ12770 1279 aa17.11■□□□□ 0.33
CHRNE-201ENST00000293780 CTBP1Q13363 440 aa17.11■□□□□ 0.33
CHRNE-201ENST00000293780 TLR1Q15399 786 aa17.11■□□□□ 0.33
CHRNE-201ENST00000293780 ZNF423Q2M1K9 1284 aa17.11■□□□□ 0.33
CHRNE-201ENST00000293780 CENPLQ8N0S6 344 aaPredicted RBP17.11■□□□□ 0.33
CHRNE-201ENST00000293780 FSTL5Q8N475 847 aaPredicted RBP17.11■□□□□ 0.33
CHRNE-201ENST00000293780 CNTD1Q8N815 330 aa17.11■□□□□ 0.33
CHRNE-201ENST00000293780 CNDP1Q96KN2 507 aa17.11■□□□□ 0.33
CHRNE-201ENST00000293780 OR12D3Q9UGF7 316 aa17.11■□□□□ 0.33
CHRNE-201ENST00000293780 TRIP12Q14669 1992 aaPredicted RBP17.11■□□□□ 0.33
CHRNE-201ENST00000293780 A0A1B0GVG6 124 aa17.1■□□□□ 0.33
CHRNE-201ENST00000293780 MEIS3P2A8K0S8 358 aa17.1■□□□□ 0.33
CHRNE-201ENST00000293780 TMEM233B4DJY2 109 aa17.1■□□□□ 0.33
CHRNE-201ENST00000293780 PTGESO14684 152 aa17.1■□□□□ 0.33
CHRNE-201ENST00000293780 XPOTO43592 962 aaKnown RBP17.1■□□□□ 0.33
CHRNE-201ENST00000293780 H2AFYO75367 372 aaKnown RBP17.1■□□□□ 0.33
CHRNE-201ENST00000293780 PIM1P11309 404 aaPredicted RBP17.1■□□□□ 0.33
CHRNE-201ENST00000293780 ENO3P13929 434 aaPredicted RBP17.1■□□□□ 0.33
CHRNE-201ENST00000293780 SNAPC2Q13487 334 aa17.1■□□□□ 0.33
CHRNE-201ENST00000293780 LAMB3Q13751 1172 aa17.1■□□□□ 0.33
CHRNE-201ENST00000293780 EML3Q32P44 896 aa17.1■□□□□ 0.33
CHRNE-201ENST00000293780 PRAMEF19Q5SWL8 479 aa17.1■□□□□ 0.33
CHRNE-201ENST00000293780 SDCCAG8Q86SQ7 713 aaPredicted RBP17.1■□□□□ 0.33
CHRNE-201ENST00000293780 SATL1Q86VE3 508 aa17.1■□□□□ 0.33
CHRNE-201ENST00000293780 MFSD6LQ8IWD5 586 aa17.1■□□□□ 0.33
CHRNE-201ENST00000293780 RP9Q8TA86 221 aaKnown RBP17.1■□□□□ 0.33
CHRNE-201ENST00000293780 DCUN1D1Q96GG9 259 aa17.1■□□□□ 0.33
CHRNE-201ENST00000293780 COLEC11Q9BWP8 271 aa17.1■□□□□ 0.33
CHRNE-201ENST00000293780 FTHL17Q9BXU8 183 aa17.1■□□□□ 0.33
CHRNE-201ENST00000293780 RHOBTB2Q9BYZ6 727 aa17.1■□□□□ 0.33
CHRNE-201ENST00000293780 TKTL2Q9H0I9 626 aa17.1■□□□□ 0.33
CHRNE-201ENST00000293780 SMIM35A0A1B0GVV1 85 aa17.1■□□□□ 0.33
CHRNE-201ENST00000293780 ERI2A8K979 691 aaKnown RBP17.1■□□□□ 0.33
CHRNE-201ENST00000293780 NCAM2O15394 837 aa17.1■□□□□ 0.33
CHRNE-201ENST00000293780 PEX1O43933 1283 aa17.1■□□□□ 0.33
CHRNE-201ENST00000293780 DLX3O60479 287 aa17.1■□□□□ 0.33
CHRNE-201ENST00000293780 LRIG2O94898 1065 aa17.1■□□□□ 0.33
CHRNE-201ENST00000293780 OR6B1O95007 311 aa17.1■□□□□ 0.33
CHRNE-201ENST00000293780 MT-CYBP00156 380 aaPredicted RBP17.1■□□□□ 0.33
CHRNE-201ENST00000293780 CDH17Q12864 832 aa17.1■□□□□ 0.33
CHRNE-201ENST00000293780 CEACAM7Q14002 265 aa17.1■□□□□ 0.33
CHRNE-201ENST00000293780 PIGGQ5H8A4 983 aa17.1■□□□□ 0.33
CHRNE-201ENST00000293780 ITPRIPL1Q6GPH6 555 aa17.1■□□□□ 0.33
CHRNE-201ENST00000293780 C16orf89Q6UX73 402 aa17.1■□□□□ 0.33
CHRNE-201ENST00000293780 CEP97Q8IW35 865 aa17.1■□□□□ 0.33
CHRNE-201ENST00000293780 LENG1Q96BZ8 264 aaPredicted RBP17.1■□□□□ 0.33
CHRNE-201ENST00000293780 CCDC28BQ9BUN5 200 aa17.1■□□□□ 0.33
CHRNE-201ENST00000293780 DNAI2Q9GZS0 605 aa17.1■□□□□ 0.33
CHRNE-201ENST00000293780 TRHDEQ9UKU6 1024 aa17.1■□□□□ 0.33
CHRNE-201ENST00000293780 PLXNB2O15031 1838 aa17.1■□□□□ 0.33
CHRNE-201ENST00000293780 GABRDO14764 452 aa17.09■□□□□ 0.33
CHRNE-201ENST00000293780 TREHO43280 583 aa17.09■□□□□ 0.33
CHRNE-201ENST00000293780 PGM3O95394 542 aa17.09■□□□□ 0.33
CHRNE-201ENST00000293780 HCAR3P49019 387 aa17.09■□□□□ 0.33
CHRNE-201ENST00000293780 CHN2P52757 468 aa17.09■□□□□ 0.33
CHRNE-201ENST00000293780 NSUN2Q08J23 767 aaKnown RBP eCLIP17.09■□□□□ 0.33
CHRNE-201ENST00000293780 FLOT2Q14254 428 aa17.09■□□□□ 0.33
CHRNE-201ENST00000293780 POU6F1Q14863 301 aa17.09■□□□□ 0.33
CHRNE-201ENST00000293780 MAP3K21Q5TCX8 1036 aa17.09■□□□□ 0.33
CHRNE-201ENST00000293780 BNC2Q6ZN30 1099 aaPredicted RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms