RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 ZC3H10Q96K80 434 aaKnown RBP27.4■■□□□ 1.98
SSU72-201ENST00000291386 SPACA7Q96KW9 195 aa27.4■■□□□ 1.98
SSU72-201ENST00000291386 UBA2Q9UBT2 640 aaPredicted RBP27.4■■□□□ 1.98
SSU72-201ENST00000291386 IPO11Q9UI26 975 aaKnown RBP27.4■■□□□ 1.98
SSU72-201ENST00000291386 FARP1Q9Y4F1 1045 aaPredicted RBP27.4■■□□□ 1.98
SSU72-201ENST00000291386 CCDC66A2RUB6 948 aa27.39■■□□□ 1.98
SSU72-201ENST00000291386 J3KR12 359 aa27.39■■□□□ 1.98
SSU72-201ENST00000291386 DNTTP04053 509 aa27.39■■□□□ 1.98
SSU72-201ENST00000291386 ACADMP11310 421 aa27.39■■□□□ 1.98
SSU72-201ENST00000291386 SIM2Q14190 667 aaPredicted RBP27.39■■□□□ 1.98
SSU72-201ENST00000291386 CST6Q15828 149 aa27.39■■□□□ 1.98
SSU72-201ENST00000291386 CARD16Q5EG05 197 aa27.39■■□□□ 1.98
SSU72-201ENST00000291386 MFSD7Q6UXD7 560 aa27.39■■□□□ 1.98
SSU72-201ENST00000291386 RCOR2Q8IZ40 523 aa27.39■■□□□ 1.98
SSU72-201ENST00000291386 NETO2Q8NC67 525 aa27.39■■□□□ 1.98
SSU72-201ENST00000291386 EXD1Q8NHP7 514 aa27.39■■□□□ 1.98
SSU72-201ENST00000291386 RLN3Q8WXF3 142 aa27.39■■□□□ 1.98
SSU72-201ENST00000291386 KRT35Q92764 455 aa27.39■■□□□ 1.98
SSU72-201ENST00000291386 PPM1HQ9ULR3 514 aa27.39■■□□□ 1.98
SSU72-201ENST00000291386 SPAG17Q6Q759 2223 aa27.39■■□□□ 1.97
SSU72-201ENST00000291386 IGHV1OR15-9A0A0B4J2B8 117 aa27.38■■□□□ 1.97
SSU72-201ENST00000291386 TMCC1O94876 653 aa27.38■■□□□ 1.97
SSU72-201ENST00000291386 ZRANB2O95218 330 aaKnown RBP eCLIP27.38■■□□□ 1.97
SSU72-201ENST00000291386 ADH1BP00325 375 aa27.38■■□□□ 1.97
SSU72-201ENST00000291386 GSRP00390 522 aa27.38■■□□□ 1.97
SSU72-201ENST00000291386 CDKN2BP42772 138 aa27.38■■□□□ 1.97
SSU72-201ENST00000291386 MARCKSL1P49006 195 aa27.38■■□□□ 1.97
SSU72-201ENST00000291386 TPMTP51580 245 aa27.38■■□□□ 1.97
SSU72-201ENST00000291386 RFTN1Q14699 578 aaPredicted RBP27.38■■□□□ 1.97
SSU72-201ENST00000291386 LEKR1Q6ZMV7 388 aa27.38■■□□□ 1.97
SSU72-201ENST00000291386 ARHGAP36Q6ZRI8 547 aa27.38■■□□□ 1.97
SSU72-201ENST00000291386 USP30Q70CQ3 517 aa27.38■■□□□ 1.97
SSU72-201ENST00000291386 MMAAQ8IVH4 418 aaKnown RBP27.38■■□□□ 1.97
SSU72-201ENST00000291386 SUMF1Q8NBK3 374 aa27.38■■□□□ 1.97
SSU72-201ENST00000291386 RBM41Q96IZ5 413 aaKnown RBP27.38■■□□□ 1.97
SSU72-201ENST00000291386 ZNF599Q96NL3 588 aa27.38■■□□□ 1.97
SSU72-201ENST00000291386 MAK16Q9BXY0 300 aaKnown RBP27.38■■□□□ 1.97
SSU72-201ENST00000291386 TNKS2Q9H2K2 1166 aa27.38■■□□□ 1.97
SSU72-201ENST00000291386 PABPC3Q9H361 631 aaKnown RBP27.38■■□□□ 1.97
SSU72-201ENST00000291386 SP110Q9HB58 689 aa27.38■■□□□ 1.97
SSU72-201ENST00000291386 MBD1Q9UIS9 605 aaPredicted RBP27.38■■□□□ 1.97
SSU72-201ENST00000291386 AMFRQ9UKV5 643 aa27.38■■□□□ 1.97
SSU72-201ENST00000291386 GUCA1BQ9UMX6 200 aa27.38■■□□□ 1.97
SSU72-201ENST00000291386 CAPN6Q9Y6Q1 641 aa27.38■■□□□ 1.97
SSU72-201ENST00000291386 MFSD11O43934 449 aa27.37■■□□□ 1.97
SSU72-201ENST00000291386 MAFKO60675 156 aa27.37■■□□□ 1.97
SSU72-201ENST00000291386 ZFXP17010 805 aaPredicted RBP27.37■■□□□ 1.97
SSU72-201ENST00000291386 C5AR1P21730 350 aa27.37■■□□□ 1.97
SSU72-201ENST00000291386 OXTRP30559 389 aa27.37■■□□□ 1.97
SSU72-201ENST00000291386 RECQLP46063 649 aaPredicted RBP27.37■■□□□ 1.97
SSU72-201ENST00000291386 PEX5P50542 639 aa27.37■■□□□ 1.97
SSU72-201ENST00000291386 GALNT2Q10471 571 aa27.37■■□□□ 1.97
SSU72-201ENST00000291386 SFSWAPQ12872 951 aaKnown RBP27.37■■□□□ 1.97
SSU72-201ENST00000291386 CYTH1Q15438 398 aa27.37■■□□□ 1.97
SSU72-201ENST00000291386 TTC31Q49AM3 519 aaPredicted RBP27.37■■□□□ 1.97
SSU72-201ENST00000291386 SLC36A4Q6YBV0 504 aa27.37■■□□□ 1.97
SSU72-201ENST00000291386 SPOCD1Q6ZMY3 1216 aa27.37■■□□□ 1.97
SSU72-201ENST00000291386 DPY19L3Q6ZPD9 716 aa27.37■■□□□ 1.97
SSU72-201ENST00000291386 CEP68Q76N32 757 aa27.37■■□□□ 1.97
SSU72-201ENST00000291386 PLD5Q8N7P1 536 aa27.37■■□□□ 1.97
SSU72-201ENST00000291386 TMIEQ8NEW7 156 aa27.37■■□□□ 1.97
SSU72-201ENST00000291386 OR2AP1Q8NGE2 309 aa27.37■■□□□ 1.97
SSU72-201ENST00000291386 NKD2Q969F2 451 aaPredicted RBP27.37■■□□□ 1.97
SSU72-201ENST00000291386 PHOX2BQ99453 314 aa27.37■■□□□ 1.97
SSU72-201ENST00000291386 CD93Q9NPY3 652 aa27.37■■□□□ 1.97
SSU72-201ENST00000291386 CYP8B1Q9UNU6 501 aa27.37■■□□□ 1.97
SSU72-201ENST00000291386 PPP2R2CQ9Y2T4 447 aa27.37■■□□□ 1.97
SSU72-201ENST00000291386 APOL1O14791 398 aa27.36■■□□□ 1.97
SSU72-201ENST00000291386 PTMAP06454 111 aaKnown RBP27.36■■□□□ 1.97
SSU72-201ENST00000291386 CHRNA3P32297 505 aa27.36■■□□□ 1.97
SSU72-201ENST00000291386 SNRPD1P62314 119 aaKnown RBP27.36■■□□□ 1.97
SSU72-201ENST00000291386 PLK5Q496M5 336 aa27.36■■□□□ 1.97
SSU72-201ENST00000291386 SPDYCQ5MJ68 293 aa27.36■■□□□ 1.97
SSU72-201ENST00000291386 FAM46CQ5VWP2 391 aa27.36■■□□□ 1.97
SSU72-201ENST00000291386 PEX26Q7Z412 305 aa27.36■■□□□ 1.97
SSU72-201ENST00000291386 KBTBD6Q86V97 674 aa27.36■■□□□ 1.97
SSU72-201ENST00000291386 ATPAF2Q8N5M1 289 aa27.36■■□□□ 1.97
SSU72-201ENST00000291386 FRMD1Q8N878 549 aa27.36■■□□□ 1.97
SSU72-201ENST00000291386 TRAF3IP1Q8TDR0 691 aaPredicted RBP27.36■■□□□ 1.97
SSU72-201ENST00000291386 DUSP15Q9H1R2 295 aaPredicted RBP27.36■■□□□ 1.97
SSU72-201ENST00000291386 KCNF1Q9H3M0 494 aa27.36■■□□□ 1.97
SSU72-201ENST00000291386 WSB2Q9NYS7 404 aaPredicted RBP27.36■■□□□ 1.97
SSU72-201ENST00000291386 INVSQ9Y283 1065 aa27.36■■□□□ 1.97
SSU72-201ENST00000291386 MIF4GDA9UHW6 222 aaKnown RBP27.35■■□□□ 1.97
SSU72-201ENST00000291386 C1QTNF3-AMACRE9PGA6 284 aa27.35■■□□□ 1.97
SSU72-201ENST00000291386 BNIP3LO60238 219 aa27.35■■□□□ 1.97
SSU72-201ENST00000291386 PEX11BO96011 259 aa27.35■■□□□ 1.97
SSU72-201ENST00000291386 LMNAP02545 664 aaKnown RBP27.35■■□□□ 1.97
SSU72-201ENST00000291386 PRNPP04156 253 aa27.35■■□□□ 1.97
SSU72-201ENST00000291386 CTSLP07711 333 aa27.35■■□□□ 1.97
SSU72-201ENST00000291386 BCKDHBP21953 392 aa27.35■■□□□ 1.97
SSU72-201ENST00000291386 CD6P30203 668 aa27.35■■□□□ 1.97
SSU72-201ENST00000291386 SLC8A1P32418 973 aa27.35■■□□□ 1.97
SSU72-201ENST00000291386 GARSP41250 739 aaKnown RBP27.35■■□□□ 1.97
SSU72-201ENST00000291386 COPS2P61201 443 aa27.35■■□□□ 1.97
SSU72-201ENST00000291386 PPP2R5EQ16537 467 aa27.35■■□□□ 1.97
SSU72-201ENST00000291386 TFDP3Q5H9I0 405 aa27.35■■□□□ 1.97
SSU72-201ENST00000291386 TMCO4Q5TGY1 634 aa27.35■■□□□ 1.97
SSU72-201ENST00000291386 CACUL1Q86Y37 369 aa27.35■■□□□ 1.97
SSU72-201ENST00000291386 FAM160A2Q8N612 972 aaPredicted RBP27.35■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms