RNA–Protein interactions for RNA: ENST00000290330.7

SNF8-201, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNF8, Length 951 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-201ENST00000290330 SERAC1Q96JX3 654 aa10.7□□□□□ -0.7
SNF8-201ENST00000290330 CCDC114Q96M63 670 aa10.7□□□□□ -0.7
SNF8-201ENST00000290330 ELF4Q99607 663 aaPredicted RBP10.7□□□□□ -0.7
SNF8-201ENST00000290330 SELENOOQ9BVL4 669 aa10.7□□□□□ -0.7
SNF8-201ENST00000290330 OSBPL2Q9H1P3 480 aa10.7□□□□□ -0.7
SNF8-201ENST00000290330 ATP13A1Q9HD20 1204 aa10.7□□□□□ -0.7
SNF8-201ENST00000290330 NDFIP2Q9NV92 336 aa10.7□□□□□ -0.7
SNF8-201ENST00000290330 FARP1Q9Y4F1 1045 aaPredicted RBP10.7□□□□□ -0.7
SNF8-201ENST00000290330 KNL1Q8NG31 2342 aa10.7□□□□□ -0.7
SNF8-201ENST00000290330 A0A1B0GTQ1 180 aa10.69□□□□□ -0.7
SNF8-201ENST00000290330 SIGLEC16A6NMB1 481 aa10.69□□□□□ -0.7
SNF8-201ENST00000290330 ESPNB1AK53 854 aa10.69□□□□□ -0.7
SNF8-201ENST00000290330 FAM72CH0Y354 149 aa10.69□□□□□ -0.7
SNF8-201ENST00000290330 RNF103O00237 685 aa10.69□□□□□ -0.7
SNF8-201ENST00000290330 KPNA3O00505 521 aaPredicted RBP10.69□□□□□ -0.7
SNF8-201ENST00000290330 TEX33O43247 280 aa10.69□□□□□ -0.7
SNF8-201ENST00000290330 LRIG2O94898 1065 aa10.69□□□□□ -0.7
SNF8-201ENST00000290330 CD160O95971 181 aa10.69□□□□□ -0.7
SNF8-201ENST00000290330 PRNPP04156 253 aa10.69□□□□□ -0.7
SNF8-201ENST00000290330 FERP16591 822 aa10.69□□□□□ -0.7
SNF8-201ENST00000290330 GPD1P21695 349 aa10.69□□□□□ -0.7
SNF8-201ENST00000290330 MAT2AP31153 395 aaKnown RBP10.69□□□□□ -0.7
SNF8-201ENST00000290330 SERPINH1P50454 418 aaKnown RBP10.69□□□□□ -0.7
SNF8-201ENST00000290330 ARF5P84085 180 aa10.69□□□□□ -0.7
SNF8-201ENST00000290330 IL9RQ01113 521 aa10.69□□□□□ -0.7
SNF8-201ENST00000290330 SLC20A2Q08357 652 aa10.69□□□□□ -0.7
SNF8-201ENST00000290330 PIP5KL1Q5T9C9 394 aa10.69□□□□□ -0.7
SNF8-201ENST00000290330 FAM72AQ5TYM5 149 aa10.69□□□□□ -0.7
SNF8-201ENST00000290330 NAPEPLDQ6IQ20 393 aa10.69□□□□□ -0.7
SNF8-201ENST00000290330 FAM72DQ6L9T8 149 aa10.69□□□□□ -0.7
SNF8-201ENST00000290330 DPY19L3Q6ZPD9 716 aa10.69□□□□□ -0.7
SNF8-201ENST00000290330 IRF2BP2Q7Z5L9 587 aa10.69□□□□□ -0.7
SNF8-201ENST00000290330 PRPF39Q86UA1 669 aaKnown RBP10.69□□□□□ -0.7
SNF8-201ENST00000290330 NLRP14Q86W24 1093 aa10.69□□□□□ -0.7
SNF8-201ENST00000290330 TRIM69Q86WT6 500 aa10.69□□□□□ -0.7
SNF8-201ENST00000290330 FAM72BQ86X60 149 aa10.69□□□□□ -0.7
SNF8-201ENST00000290330 CCDC185Q8N715 623 aa10.69□□□□□ -0.7
SNF8-201ENST00000290330 KDF1Q8NAX2 398 aaPredicted RBP10.69□□□□□ -0.7
SNF8-201ENST00000290330 CHST14Q8NCH0 376 aa10.69□□□□□ -0.7
SNF8-201ENST00000290330 FAM172AQ8WUF8 416 aa10.69□□□□□ -0.7
SNF8-201ENST00000290330 NTAN1Q96AB6 310 aa10.69□□□□□ -0.7
SNF8-201ENST00000290330 ARRDC3Q96B67 414 aa10.69□□□□□ -0.7
SNF8-201ENST00000290330 CDC6Q99741 560 aa10.69□□□□□ -0.7
SNF8-201ENST00000290330 CEP44Q9C0F1 390 aa10.69□□□□□ -0.7
SNF8-201ENST00000290330 TNKS2Q9H2K2 1166 aa10.69□□□□□ -0.7
SNF8-201ENST00000290330 RETREG1Q9H6L5 497 aa10.69□□□□□ -0.7
SNF8-201ENST00000290330 RTN4Q9NQC3 1192 aaKnown RBP10.69□□□□□ -0.7
SNF8-201ENST00000290330 SEPT11Q9NVA2 429 aaKnown RBP10.69□□□□□ -0.7
SNF8-201ENST00000290330 TOR4AQ9NXH8 423 aa10.69□□□□□ -0.7
SNF8-201ENST00000290330 NEU3Q9UQ49 428 aa10.69□□□□□ -0.7
SNF8-201ENST00000290330 DMTF1Q9Y222 760 aa10.69□□□□□ -0.7
SNF8-201ENST00000290330 APOBEC2Q9Y235 224 aaKnown RBP10.69□□□□□ -0.7
SNF8-201ENST00000290330 CXorf51AA0A1B0GTR3 108 aa10.68□□□□□ -0.7
SNF8-201ENST00000290330 TLR4O00206 839 aa10.68□□□□□ -0.7
SNF8-201ENST00000290330 DKK1O94907 266 aa10.68□□□□□ -0.7
SNF8-201ENST00000290330 PLEKP08567 350 aaPredicted RBP10.68□□□□□ -0.7
SNF8-201ENST00000290330 ATXN1LP0C7T5 689 aaKnown RBP10.68□□□□□ -0.7
SNF8-201ENST00000290330 CCDC172P0C7W6 258 aa10.68□□□□□ -0.7
SNF8-201ENST00000290330 RHOQP17081 205 aa10.68□□□□□ -0.7
SNF8-201ENST00000290330 NUDT1P36639 197 aa10.68□□□□□ -0.7
SNF8-201ENST00000290330 ACVRL1P37023 503 aa10.68□□□□□ -0.7
SNF8-201ENST00000290330 ETFBP38117 255 aa10.68□□□□□ -0.7
SNF8-201ENST00000290330 GRK6P43250 576 aa10.68□□□□□ -0.7
SNF8-201ENST00000290330 RECQLP46063 649 aaPredicted RBP10.68□□□□□ -0.7
SNF8-201ENST00000290330 MAPKAPK2P49137 400 aa10.68□□□□□ -0.7
SNF8-201ENST00000290330 ZNF143P52747 638 aaPredicted RBP10.68□□□□□ -0.7
SNF8-201ENST00000290330 NXPH1P58417 271 aa10.68□□□□□ -0.7
SNF8-201ENST00000290330 RPL7AP62424 266 aaKnown RBP10.68□□□□□ -0.7
SNF8-201ENST00000290330 CCDC15Q0P6D6 951 aa10.68□□□□□ -0.7
SNF8-201ENST00000290330 SCAPQ12770 1279 aa10.68□□□□□ -0.7
SNF8-201ENST00000290330 SHBQ15464 509 aa10.68□□□□□ -0.7
SNF8-201ENST00000290330 SLC45A4Q5BKX6 768 aa10.68□□□□□ -0.7
SNF8-201ENST00000290330 ARSIQ5FYB1 569 aa10.68□□□□□ -0.7
SNF8-201ENST00000290330 PPP1R15BQ5SWA1 713 aa10.68□□□□□ -0.7
SNF8-201ENST00000290330 ACAD10Q6JQN1 1059 aa10.68□□□□□ -0.7
SNF8-201ENST00000290330 RWDD4Q6NW29 188 aaKnown RBP10.68□□□□□ -0.7
SNF8-201ENST00000290330 SLFN11Q7Z7L1 901 aa10.68□□□□□ -0.7
SNF8-201ENST00000290330 PCDH20Q8N6Y1 951 aaKnown RBP10.68□□□□□ -0.7
SNF8-201ENST00000290330 MFSD2AQ8NA29 543 aa10.68□□□□□ -0.7
SNF8-201ENST00000290330 BAP1Q92560 729 aa10.68□□□□□ -0.7
SNF8-201ENST00000290330 ARHGEF2Q92974 986 aaKnown RBP10.68□□□□□ -0.7
SNF8-201ENST00000290330 MRFAP1L1Q96HT8 127 aa10.68□□□□□ -0.7
SNF8-201ENST00000290330 SYT11Q9BT88 431 aa10.68□□□□□ -0.7
SNF8-201ENST00000290330 TRIM5Q9C035 493 aa10.68□□□□□ -0.7
SNF8-201ENST00000290330 PREBQ9HCU5 417 aa10.68□□□□□ -0.7
SNF8-201ENST00000290330 GDF3Q9NR23 364 aa10.68□□□□□ -0.7
SNF8-201ENST00000290330 TMEM248Q9NWD8 314 aa10.68□□□□□ -0.7
SNF8-201ENST00000290330 IL36AQ9UHA7 158 aa10.68□□□□□ -0.7
SNF8-201ENST00000290330 DNAI1Q9UI46 699 aa10.68□□□□□ -0.7
SNF8-201ENST00000290330 MYO6Q9UM54 1294 aa10.68□□□□□ -0.7
SNF8-201ENST00000290330 FCF1Q9Y324 198 aaKnown RBP10.68□□□□□ -0.7
SNF8-201ENST00000290330 ACTL7AQ9Y615 435 aa10.68□□□□□ -0.7
SNF8-201ENST00000290330 WASF2Q9Y6W5 498 aa10.68□□□□□ -0.7
SNF8-201ENST00000290330 MAP1BP46821 2468 aaKnown RBP10.68□□□□□ -0.7
SNF8-201ENST00000290330 CACNA1BQ00975 2339 aa10.68□□□□□ -0.7
SNF8-201ENST00000290330 PLXNA2O75051 1894 aa10.68□□□□□ -0.7
SNF8-201ENST00000290330 NYNRINQ9P2P1 1898 aaKnown RBP10.68□□□□□ -0.7
SNF8-201ENST00000290330 EPG5Q9HCE0 2579 aa10.68□□□□□ -0.7
SNF8-201ENST00000290330 CHD8Q9HCK8 2581 aa10.67□□□□□ -0.7
SNF8-201ENST00000290330 TMEM8BA6NDV4 472 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms