RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 MTTPP55157 894 aa13.6□□□□□ -0.23
SCAF4-201ENST00000286835 MAP3K7CLP57077 242 aa13.6□□□□□ -0.23
SCAF4-201ENST00000286835 XIAPP98170 497 aa13.6□□□□□ -0.23
SCAF4-201ENST00000286835 MYLK3Q32MK0 819 aa13.6□□□□□ -0.23
SCAF4-201ENST00000286835 QKIQ96PU8 341 aaKnown RBP eCLIP13.6□□□□□ -0.236e-7■■■■□ 23
SCAF4-201ENST00000286835 POMKQ9H5K3 350 aa13.6□□□□□ -0.23
SCAF4-201ENST00000286835 ARHGEF38Q9NXL2 777 aa13.6□□□□□ -0.23
SCAF4-201ENST00000286835 NCKIPSDQ9NZQ3 722 aa13.6□□□□□ -0.23
SCAF4-201ENST00000286835 EMCNQ9ULC0 261 aa13.6□□□□□ -0.23
SCAF4-201ENST00000286835 DOLKQ9UPQ8 538 aa13.6□□□□□ -0.23
SCAF4-201ENST00000286835 DMTF1Q9Y222 760 aa13.6□□□□□ -0.23
SCAF4-201ENST00000286835 CDK5RAP2Q96SN8 1893 aa13.6□□□□□ -0.23
SCAF4-201ENST00000286835 ATAD5Q96QE3 1844 aa13.6□□□□□ -0.23
SCAF4-201ENST00000286835 MPOP05164 745 aa13.6□□□□□ -0.23
SCAF4-201ENST00000286835 TGFB3P10600 412 aa13.6□□□□□ -0.23
SCAF4-201ENST00000286835 ANO4Q32M45 955 aa13.6□□□□□ -0.23
SCAF4-201ENST00000286835 REPS2Q8NFH8 660 aa13.6□□□□□ -0.23
SCAF4-201ENST00000286835 CCDC28BQ9BUN5 200 aa13.6□□□□□ -0.23
SCAF4-201ENST00000286835 ASB7Q9H672 318 aa13.6□□□□□ -0.23
SCAF4-201ENST00000286835 DDX43Q9NXZ2 648 aaKnown RBP13.6□□□□□ -0.23
SCAF4-201ENST00000286835 RSL24D1Q9UHA3 163 aaKnown RBP13.6□□□□□ -0.23
SCAF4-201ENST00000286835 MRASO14807 208 aa13.6□□□□□ -0.23
SCAF4-201ENST00000286835 MAGEB3O15480 346 aa13.6□□□□□ -0.23
SCAF4-201ENST00000286835 GMNNO75496 209 aa13.6□□□□□ -0.23
SCAF4-201ENST00000286835 ERCC2P18074 760 aa13.6□□□□□ -0.23
SCAF4-201ENST00000286835 IL4RP24394 825 aa13.6□□□□□ -0.23
SCAF4-201ENST00000286835 ENPEPQ07075 957 aa13.6□□□□□ -0.23
SCAF4-201ENST00000286835 CACNB2Q08289 660 aaPredicted RBP13.6□□□□□ -0.23
SCAF4-201ENST00000286835 TTC39CQ8N584 583 aa13.6□□□□□ -0.23
SCAF4-201ENST00000286835 SLC39A3Q9BRY0 314 aa13.6□□□□□ -0.23
SCAF4-201ENST00000286835 ADNPQ9H2P0 1102 aa13.6□□□□□ -0.23
SCAF4-201ENST00000286835 DNAAF2Q9NVR5 837 aaKnown RBP13.6□□□□□ -0.23
SCAF4-201ENST00000286835 LRFN2Q9ULH4 789 aa13.6□□□□□ -0.23
SCAF4-201ENST00000286835 HEMK1Q9Y5R4 338 aaPredicted RBP13.6□□□□□ -0.23
SCAF4-201ENST00000286835 ANGPT2O15123 496 aa13.59□□□□□ -0.23
SCAF4-201ENST00000286835 ADCY6O43306 1168 aa13.59□□□□□ -0.23
SCAF4-201ENST00000286835 IL10P22301 178 aa13.59□□□□□ -0.23
SCAF4-201ENST00000286835 SEMA5AQ13591 1074 aa13.59□□□□□ -0.23
SCAF4-201ENST00000286835 TBCELQ5QJ74 424 aa13.59□□□□□ -0.23
SCAF4-201ENST00000286835 PSTKQ8IV42 348 aaKnown RBP13.59□□□□□ -0.23
SCAF4-201ENST00000286835 CCDC138Q96M89 665 aa13.59□□□□□ -0.23
SCAF4-201ENST00000286835 RBBP8Q99708 897 aa13.59□□□□□ -0.23
SCAF4-201ENST00000286835 GOLGA2P5Q9HBQ8 144 aa13.59□□□□□ -0.23
SCAF4-201ENST00000286835 PDGFCQ9NRA1 345 aa13.59□□□□□ -0.23
SCAF4-201ENST00000286835 PRPF19Q9UMS4 504 aaKnown RBP13.59□□□□□ -0.23
SCAF4-201ENST00000286835 ZBTB24O43167 697 aaPredicted RBP13.59□□□□□ -0.23
SCAF4-201ENST00000286835 MAP4P27816 1152 aaKnown RBP13.59□□□□□ -0.23
SCAF4-201ENST00000286835 KPNA2P52292 529 aaKnown RBP13.59□□□□□ -0.23
SCAF4-201ENST00000286835 NCBP2-AS2Q69YL0 99 aa13.59□□□□□ -0.23
SCAF4-201ENST00000286835 ZNF470Q6ECI4 717 aa13.59□□□□□ -0.23
SCAF4-201ENST00000286835 TRIM74Q86UV6 250 aa13.59□□□□□ -0.23
SCAF4-201ENST00000286835 TRIM73Q86UV7 250 aa13.59□□□□□ -0.23
SCAF4-201ENST00000286835 PIGZQ86VD9 579 aa13.59□□□□□ -0.23
SCAF4-201ENST00000286835 ZC3H15Q8WU90 426 aaKnown RBP13.59□□□□□ -0.23
SCAF4-201ENST00000286835 SORT1Q99523 831 aa13.59□□□□□ -0.23
SCAF4-201ENST00000286835 CCDC90BQ9GZT6 254 aa13.59□□□□□ -0.23
SCAF4-201ENST00000286835 NMRK2Q9NPI5 230 aa13.59□□□□□ -0.23
SCAF4-201ENST00000286835 TUBGCP4Q9UGJ1 667 aa13.59□□□□□ -0.23
SCAF4-201ENST00000286835 ZDHHC2Q9UIJ5 367 aa13.59□□□□□ -0.23
SCAF4-201ENST00000286835 SNX10Q9Y5X0 201 aa13.59□□□□□ -0.23
SCAF4-201ENST00000286835 MT-ND1P03886 318 aa13.59□□□□□ -0.23
SCAF4-201ENST00000286835 HOXD10P28358 340 aa13.59□□□□□ -0.23
SCAF4-201ENST00000286835 LIPMQ5VYY2 423 aa13.59□□□□□ -0.23
SCAF4-201ENST00000286835 LBX2Q6XYB7 198 aa13.59□□□□□ -0.23
SCAF4-201ENST00000286835 MAVSQ7Z434 540 aa13.59□□□□□ -0.23
SCAF4-201ENST00000286835 HERC6Q8IVU3 1022 aa13.59□□□□□ -0.23
SCAF4-201ENST00000286835 LPGAT1Q92604 370 aa13.59□□□□□ -0.23
SCAF4-201ENST00000286835 NXNL1Q96CM4 212 aa13.59□□□□□ -0.23
SCAF4-201ENST00000286835 BTAF1O14981 1849 aa13.59□□□□□ -0.23
SCAF4-201ENST00000286835 CITO14578 2027 aa13.58□□□□□ -0.23
SCAF4-201ENST00000286835 TRPC5OSA6NMA1 111 aa13.58□□□□□ -0.23
SCAF4-201ENST00000286835 MDM4O15151 490 aa13.58□□□□□ -0.23
SCAF4-201ENST00000286835 GAS2O43903 313 aaKnown RBP13.58□□□□□ -0.23
SCAF4-201ENST00000286835 PITX1P78337 314 aaPredicted RBP13.58□□□□□ -0.23
SCAF4-201ENST00000286835 MS4A2Q01362 244 aa13.58□□□□□ -0.23
SCAF4-201ENST00000286835 MAPRE2Q15555 327 aa13.58□□□□□ -0.23
SCAF4-201ENST00000286835 OLFML1Q6UWY5 402 aa13.58□□□□□ -0.23
SCAF4-201ENST00000286835 SH2D5Q6ZV89 423 aa13.58□□□□□ -0.23
SCAF4-201ENST00000286835 PCDHGB4Q9UN71 923 aa13.58□□□□□ -0.23
SCAF4-201ENST00000286835 PCDHGB5Q9Y5G0 923 aa13.58□□□□□ -0.23
SCAF4-201ENST00000286835 ARIH2O95376 493 aa13.58□□□□□ -0.24
SCAF4-201ENST00000286835 CYP3A5P20815 502 aa13.58□□□□□ -0.24
SCAF4-201ENST00000286835 LMO2P25791 158 aa13.58□□□□□ -0.24
SCAF4-201ENST00000286835 LIMK2P53671 638 aa13.58□□□□□ -0.24
SCAF4-201ENST00000286835 OTUD3Q5T2D3 398 aaPredicted RBP13.58□□□□□ -0.24
SCAF4-201ENST00000286835 DENND6AQ8IWF6 608 aa13.58□□□□□ -0.24
SCAF4-201ENST00000286835 ADCY4Q8NFM4 1077 aa13.58□□□□□ -0.24
SCAF4-201ENST00000286835 TNIP3Q96KP6 325 aa13.58□□□□□ -0.24
SCAF4-201ENST00000286835 SEPHS2Q99611 448 aa13.58□□□□□ -0.24
SCAF4-201ENST00000286835 OSMRQ99650 979 aa13.58□□□□□ -0.24
SCAF4-201ENST00000286835 FICDQ9BVA6 458 aa13.58□□□□□ -0.24
SCAF4-201ENST00000286835 CDHR5Q9HBB8 845 aa13.58□□□□□ -0.24
SCAF4-201ENST00000286835 TBC1D23Q9NUY8 699 aa13.58□□□□□ -0.24
SCAF4-201ENST00000286835 UBAP1Q9NZ09 502 aa13.58□□□□□ -0.24
SCAF4-201ENST00000286835 MOCS1Q9NZB8 636 aa13.58□□□□□ -0.24
SCAF4-201ENST00000286835 PSMD12O00232 456 aaPredicted RBP13.58□□□□□ -0.24
SCAF4-201ENST00000286835 APOA4P06727 396 aa13.58□□□□□ -0.24
SCAF4-201ENST00000286835 NMBRP28336 390 aa13.58□□□□□ -0.24
SCAF4-201ENST00000286835 LRPAP1P30533 357 aa13.58□□□□□ -0.24
SCAF4-201ENST00000286835 NDUFV1P49821 464 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms