RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 RUFY3Q7L099 469 aa2.84□□□□□ -1.96
CHD1-201ENST00000284049 TUBGCP3Q96CW5 907 aa2.84□□□□□ -1.96
CHD1-201ENST00000284049 RNFT2Q96EX2 444 aa2.84□□□□□ -1.96
CHD1-201ENST00000284049 NEIL1Q96FI4 390 aaPredicted RBP2.84□□□□□ -1.96
CHD1-201ENST00000284049 PCYT2Q99447 389 aa2.84□□□□□ -1.96
CHD1-201ENST00000284049 PTDSS2Q9BVG9 487 aa2.84□□□□□ -1.96
CHD1-201ENST00000284049 NUF2Q9BZD4 464 aa2.84□□□□□ -1.96
CHD1-201ENST00000284049 RNPEPQ9H4A4 650 aa2.84□□□□□ -1.96
CHD1-201ENST00000284049 C6orf203Q9P0P8 240 aaPredicted RBP2.84□□□□□ -1.96
CHD1-201ENST00000284049 DNAJB9Q9UBS3 223 aa2.84□□□□□ -1.96
CHD1-201ENST00000284049 PCDHGA1Q9Y5H4 931 aa2.84□□□□□ -1.96
CHD1-201ENST00000284049 LRP6O75581 1613 aa2.84□□□□□ -1.96
CHD1-201ENST00000284049 QRICH2Q9H0J4 1663 aa2.84□□□□□ -1.96
CHD1-201ENST00000284049 AKR1B15C9JRZ8 316 aaPredicted RBP2.84□□□□□ -1.96
CHD1-201ENST00000284049 OIP5O43482 229 aa2.84□□□□□ -1.96
CHD1-201ENST00000284049 DGAT1O75907 488 aa2.84□□□□□ -1.96
CHD1-201ENST00000284049 CHEK2O96017 543 aa2.84□□□□□ -1.96
CHD1-201ENST00000284049 INHBAP08476 426 aa2.84□□□□□ -1.96
CHD1-201ENST00000284049 DMWDQ09019 674 aa2.84□□□□□ -1.96
CHD1-201ENST00000284049 KIF5AQ12840 1032 aa2.84□□□□□ -1.96
CHD1-201ENST00000284049 E2F2Q14209 437 aa2.84□□□□□ -1.96
CHD1-201ENST00000284049 PUM1Q14671 1186 aaKnown RBP eCLIP2.84□□□□□ -1.963e-6■■■□□ 15.5
CHD1-201ENST00000284049 UBXN2BQ14CS0 331 aa2.84□□□□□ -1.96
CHD1-201ENST00000284049 C5orf22Q49AR2 442 aa2.84□□□□□ -1.96
CHD1-201ENST00000284049 TMEM132EQ6IEE7 984 aa2.84□□□□□ -1.96
CHD1-201ENST00000284049 CES5AQ6NT32 575 aa2.84□□□□□ -1.96
CHD1-201ENST00000284049 Q6ZVL8 140 aa2.84□□□□□ -1.96
CHD1-201ENST00000284049 PLEKHM3Q6ZWE6 761 aa2.84□□□□□ -1.96
CHD1-201ENST00000284049 MED25Q71SY5 747 aa2.84□□□□□ -1.96
CHD1-201ENST00000284049 LPCAT2Q7L5N7 544 aa2.84□□□□□ -1.96
CHD1-201ENST00000284049 TMEM116Q8NCL8 245 aa2.84□□□□□ -1.96
CHD1-201ENST00000284049 B3GALNT2Q8NCR0 500 aa2.84□□□□□ -1.96
CHD1-201ENST00000284049 OR14K1Q8NGZ2 314 aa2.84□□□□□ -1.96
CHD1-201ENST00000284049 LENG8Q96PV6 779 aaPredicted RBP2.84□□□□□ -1.96
CHD1-201ENST00000284049 FAM192AQ9GZU8 254 aa2.84□□□□□ -1.96
CHD1-201ENST00000284049 ADAMTS10Q9H324 1103 aa2.84□□□□□ -1.96
CHD1-201ENST00000284049 USP29Q9HBJ7 922 aa2.84□□□□□ -1.96
CHD1-201ENST00000284049 GBA2Q9HCG7 927 aaPredicted RBP2.84□□□□□ -1.96
CHD1-201ENST00000284049 STEAP1Q9UHE8 339 aa2.84□□□□□ -1.96
CHD1-201ENST00000284049 GLOD5A6NK44 160 aa2.83□□□□□ -1.96
CHD1-201ENST00000284049 AP3B1O00203 1094 aa2.83□□□□□ -1.96
CHD1-201ENST00000284049 EIF3DO15371 548 aaKnown RBP eCLIP2.83□□□□□ -1.963e-7■■□□□ 13.9
CHD1-201ENST00000284049 SGSM2O43147 1006 aa2.83□□□□□ -1.96
CHD1-201ENST00000284049 GFRA3O60609 400 aa2.83□□□□□ -1.96
CHD1-201ENST00000284049 PALMO75781 387 aa2.83□□□□□ -1.96
CHD1-201ENST00000284049 F9P00740 461 aa2.83□□□□□ -1.96
CHD1-201ENST00000284049 AMHP03971 560 aa2.83□□□□□ -1.96
CHD1-201ENST00000284049 TPOP07202 933 aa2.83□□□□□ -1.96
CHD1-201ENST00000284049 CYP4B1P13584 511 aa2.83□□□□□ -1.96
CHD1-201ENST00000284049 C6P13671 934 aa2.83□□□□□ -1.96
CHD1-201ENST00000284049 SDHBP21912 280 aa2.83□□□□□ -1.96
CHD1-201ENST00000284049 IL10P22301 178 aa2.83□□□□□ -1.96
CHD1-201ENST00000284049 TGM1P22735 817 aa2.83□□□□□ -1.96
CHD1-201ENST00000284049 PCSK1P29120 753 aa2.83□□□□□ -1.96
CHD1-201ENST00000284049 RAB28P51157 221 aa2.83□□□□□ -1.96
CHD1-201ENST00000284049 YWHAZP63104 245 aaKnown RBP2.83□□□□□ -1.96
CHD1-201ENST00000284049 CCDC15Q0P6D6 951 aa2.83□□□□□ -1.96
CHD1-201ENST00000284049 INAQ16352 499 aa2.83□□□□□ -1.96
CHD1-201ENST00000284049 ZNF574Q6ZN55 896 aaPredicted RBP2.83□□□□□ -1.96
CHD1-201ENST00000284049 RALYLQ86SE5 291 aaKnown RBP2.83□□□□□ -1.96
CHD1-201ENST00000284049 GPAT4Q86UL3 456 aa2.83□□□□□ -1.96
CHD1-201ENST00000284049 SPACA3Q8IXA5 215 aa2.83□□□□□ -1.96
CHD1-201ENST00000284049 LEMD2Q8NC56 503 aa2.83□□□□□ -1.96
CHD1-201ENST00000284049 SPATA20Q8TB22 786 aa2.83□□□□□ -1.96
CHD1-201ENST00000284049 GDPD5Q8WTR4 605 aa2.83□□□□□ -1.96
CHD1-201ENST00000284049 FAM216AQ8WUB2 273 aa2.83□□□□□ -1.96
CHD1-201ENST00000284049 FCGR1BQ92637 280 aa2.83□□□□□ -1.96
CHD1-201ENST00000284049 CEP95Q96GE4 821 aa2.83□□□□□ -1.96
CHD1-201ENST00000284049 KLHL5Q96PQ7 755 aa2.83□□□□□ -1.96
CHD1-201ENST00000284049 FBRSL1Q9HCM7 1045 aaKnown RBP2.83□□□□□ -1.96
CHD1-201ENST00000284049 MTUS1Q9ULD2 1270 aa2.83□□□□□ -1.96
CHD1-201ENST00000284049 ADAMTS8Q9UP79 889 aa2.83□□□□□ -1.96
CHD1-201ENST00000284049 EPN1Q9Y6I3 576 aaPredicted RBP2.83□□□□□ -1.96
CHD1-201ENST00000284049 C9orf172C9J069 976 aa2.83□□□□□ -1.96
CHD1-201ENST00000284049 GRM8O00222 908 aa2.83□□□□□ -1.96
CHD1-201ENST00000284049 SNX4O95219 450 aa2.83□□□□□ -1.96
CHD1-201ENST00000284049 BCL10O95999 233 aa2.83□□□□□ -1.96
CHD1-201ENST00000284049 SUPT20HL2P0C7V6 817 aa2.83□□□□□ -1.96
CHD1-201ENST00000284049 NCF1P14598 390 aaPredicted RBP2.83□□□□□ -1.96
CHD1-201ENST00000284049 MGAT1P26572 445 aa2.83□□□□□ -1.96
CHD1-201ENST00000284049 NUP62P37198 522 aaPredicted RBP2.83□□□□□ -1.96
CHD1-201ENST00000284049 CCR10P46092 362 aa2.83□□□□□ -1.96
CHD1-201ENST00000284049 PCOLCEQ15113 449 aa2.83□□□□□ -1.96
CHD1-201ENST00000284049 RABEP1Q15276 862 aa2.83□□□□□ -1.96
CHD1-201ENST00000284049 PKN2Q16513 984 aaKnown RBP2.83□□□□□ -1.96
CHD1-201ENST00000284049 ALG11Q2TAA5 492 aa2.83□□□□□ -1.96
CHD1-201ENST00000284049 SUPT20HL1Q3ZLR7 823 aa2.83□□□□□ -1.96
CHD1-201ENST00000284049 CRB2Q5IJ48 1285 aa2.83□□□□□ -1.96
CHD1-201ENST00000284049 FAM47AQ5JRC9 791 aa2.83□□□□□ -1.96
CHD1-201ENST00000284049 TMEM81Q6P7N7 255 aa2.83□□□□□ -1.96
CHD1-201ENST00000284049 C20orf204Q6ZNR8 217 aa2.83□□□□□ -1.96
CHD1-201ENST00000284049 PDSS2Q86YH6 399 aa2.83□□□□□ -1.96
CHD1-201ENST00000284049 SVOPQ8N4V2 548 aa2.83□□□□□ -1.96
CHD1-201ENST00000284049 RSC1A1Q92681 617 aa2.83□□□□□ -1.96
CHD1-201ENST00000284049 SLC46A2Q9BY10 475 aa2.83□□□□□ -1.96
CHD1-201ENST00000284049 PRRG4Q9BZD6 226 aa2.83□□□□□ -1.96
CHD1-201ENST00000284049 TAOK3Q9H2K8 898 aa2.83□□□□□ -1.96
CHD1-201ENST00000284049 PNNQ9H307 717 aaKnown RBP2.83□□□□□ -1.96
CHD1-201ENST00000284049 ARPP21Q9UBL0 812 aaPredicted RBP2.83□□□□□ -1.96
CHD1-201ENST00000284049 TRAF3IP3Q9Y228 551 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms