RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 ERI2A8K979 691 aaKnown RBP21.34■■□□□ 1.01
YBX3-202ENST00000279550 CCL16O15467 120 aa21.34■■□□□ 1.01
YBX3-202ENST00000279550 SNX3O60493 162 aa21.34■■□□□ 1.01
YBX3-202ENST00000279550 RFPL1O75677 317 aa21.34■■□□□ 1.01
YBX3-202ENST00000279550 RFPL2O75678 378 aa21.34■■□□□ 1.01
YBX3-202ENST00000279550 RGS19P49795 217 aa21.34■■□□□ 1.01
YBX3-202ENST00000279550 SMAD3P84022 425 aaKnown RBP21.34■■□□□ 1.01
YBX3-202ENST00000279550 PDK4Q16654 411 aa21.34■■□□□ 1.01
YBX3-202ENST00000279550 CERCAMQ5T4B2 595 aa21.34■■□□□ 1.01
YBX3-202ENST00000279550 TMC8Q8IU68 726 aa21.34■■□□□ 1.01
YBX3-202ENST00000279550 LRRC3Q9BY71 257 aa21.34■■□□□ 1.01
YBX3-202ENST00000279550 GLOD4Q9HC38 313 aa21.34■■□□□ 1.01
YBX3-202ENST00000279550 IL1RAPL1Q9NZN1 696 aa21.34■■□□□ 1.01
YBX3-202ENST00000279550 SAMD15Q9P1V8 674 aa21.34■■□□□ 1.01
YBX3-202ENST00000279550 HCFC2Q9Y5Z7 792 aa21.34■■□□□ 1.01
YBX3-202ENST00000279550 GOLGA6L7A0A1B0GV03 622 aa21.33■■□□□ 1.01
YBX3-202ENST00000279550 COCHO43405 550 aa21.33■■□□□ 1.01
YBX3-202ENST00000279550 KRT37O76014 449 aa21.33■■□□□ 1.01
YBX3-202ENST00000279550 RHOQP17081 205 aa21.33■■□□□ 1.01
YBX3-202ENST00000279550 HOXA9P31269 272 aa21.33■■□□□ 1.01
YBX3-202ENST00000279550 FBXL22Q6P050 247 aa21.33■■□□□ 1.01
YBX3-202ENST00000279550 FAM47EQ6ZV65 393 aa21.33■■□□□ 1.01
YBX3-202ENST00000279550 CCNJLQ8IV13 435 aa21.33■■□□□ 1.01
YBX3-202ENST00000279550 UMODL1-AS1Q8N2C9 162 aa21.33■■□□□ 1.01
YBX3-202ENST00000279550 TTC17Q96AE7 1141 aa21.33■■□□□ 1.01
YBX3-202ENST00000279550 BTN2A3PQ96KV6 586 aa21.33■■□□□ 1.01
YBX3-202ENST00000279550 ZYG11BQ9C0D3 744 aa21.33■■□□□ 1.01
YBX3-202ENST00000279550 NACA2Q9H009 215 aa21.33■■□□□ 1.01
YBX3-202ENST00000279550 PRO3102Q9H379 93 aa21.33■■□□□ 1.01
YBX3-202ENST00000279550 DPP7Q9UHL4 492 aa21.33■■□□□ 1.01
YBX3-202ENST00000279550 TRANK1O15050 2925 aa21.33■■□□□ 1
YBX3-202ENST00000279550 MTCL1Q9Y4B5 1905 aaKnown RBP21.33■■□□□ 1
YBX3-202ENST00000279550 IGLV3-10A0A075B6K4 115 aa21.32■■□□□ 1
YBX3-202ENST00000279550 C2orf78A6NCI8 922 aa21.32■■□□□ 1
YBX3-202ENST00000279550 HLA-DQB2P05538 268 aa21.32■■□□□ 1
YBX3-202ENST00000279550 TPH1P17752 444 aa21.32■■□□□ 1
YBX3-202ENST00000279550 CCNFP41002 786 aa21.32■■□□□ 1
YBX3-202ENST00000279550 RNF187Q5TA31 235 aaPredicted RBP21.32■■□□□ 1
YBX3-202ENST00000279550 NADSYN1Q6IA69 706 aa21.32■■□□□ 1
YBX3-202ENST00000279550 CHRDL2Q6WN34 429 aa21.32■■□□□ 1
YBX3-202ENST00000279550 RGS9BPQ6ZS82 235 aa21.32■■□□□ 1
YBX3-202ENST00000279550 GAREM2Q75VX8 874 aa21.32■■□□□ 1
YBX3-202ENST00000279550 CIR1Q86X95 450 aaPredicted RBP21.32■■□□□ 1
YBX3-202ENST00000279550 HS6ST3Q8IZP7 471 aa21.32■■□□□ 1
YBX3-202ENST00000279550 DNAAF3Q8N9W5 541 aa21.32■■□□□ 1
YBX3-202ENST00000279550 NAT9Q9BTE0 207 aa21.32■■□□□ 1
YBX3-202ENST00000279550 TLE6Q9H808 572 aa21.32■■□□□ 1
YBX3-202ENST00000279550 LRRC40Q9H9A6 602 aa21.32■■□□□ 1
YBX3-202ENST00000279550 TMEM248Q9NWD8 314 aa21.32■■□□□ 1
YBX3-202ENST00000279550 PPARGC1AQ9UBK2 798 aaKnown RBP21.32■■□□□ 1
YBX3-202ENST00000279550 IPO11Q9UI26 975 aaKnown RBP21.32■■□□□ 1
YBX3-202ENST00000279550 PSAT1Q9Y617 370 aa21.32■■□□□ 1
YBX3-202ENST00000279550 RPS6KL1Q9Y6S9 549 aa21.32■■□□□ 1
YBX3-202ENST00000279550 MYO7AQ13402 2215 aa21.32■■□□□ 1
YBX3-202ENST00000279550 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.32■■□□□ 1
YBX3-202ENST00000279550 TM9SF1O15321 606 aa21.32■■□□□ 1
YBX3-202ENST00000279550 PEX11BO96011 259 aa21.32■■□□□ 1
YBX3-202ENST00000279550 ERVK-10P10266 1014 aa21.32■■□□□ 1
YBX3-202ENST00000279550 ALADP13716 330 aa21.32■■□□□ 1
YBX3-202ENST00000279550 GABRR2P28476 465 aa21.32■■□□□ 1
YBX3-202ENST00000279550 KCNQ1P51787 676 aa21.32■■□□□ 1
YBX3-202ENST00000279550 KPNA1P52294 538 aaPredicted RBP21.32■■□□□ 1
YBX3-202ENST00000279550 RING1Q06587 406 aa21.32■■□□□ 1
YBX3-202ENST00000279550 DNAJC3Q13217 504 aa21.32■■□□□ 1
YBX3-202ENST00000279550 PRPSAP1Q14558 356 aa21.32■■□□□ 1
YBX3-202ENST00000279550 ITIH4Q14624 930 aa21.32■■□□□ 1
YBX3-202ENST00000279550 SPANXN3Q5MJ09 141 aa21.32■■□□□ 1
YBX3-202ENST00000279550 MROH9Q5TGP6 573 aa21.32■■□□□ 1
YBX3-202ENST00000279550 CDHR3Q6ZTQ4 885 aa21.32■■□□□ 1
YBX3-202ENST00000279550 ZNF669Q96BR6 464 aaPredicted RBP21.32■■□□□ 1
YBX3-202ENST00000279550 HMCESQ96FZ2 354 aa21.32■■□□□ 1
YBX3-202ENST00000279550 FCRL5Q96RD9 977 aa21.32■■□□□ 1
YBX3-202ENST00000279550 CORO1BQ9BR76 489 aa21.32■■□□□ 1
YBX3-202ENST00000279550 ASAH2Q9NR71 780 aa21.32■■□□□ 1
YBX3-202ENST00000279550 BFARQ9NZS9 450 aa21.32■■□□□ 1
YBX3-202ENST00000279550 ZNF212Q9UDV6 495 aa21.32■■□□□ 1
YBX3-202ENST00000279550 DOCK4Q8N1I0 1966 aa21.31■■□□□ 1
YBX3-202ENST00000279550 WDR91A4D1P6 747 aa21.31■■□□□ 1
YBX3-202ENST00000279550 KRT38O76015 456 aa21.31■■□□□ 1
YBX3-202ENST00000279550 KIAA0754O94854 1291 aa21.31■■□□□ 1
YBX3-202ENST00000279550 MT-CYBP00156 380 aaPredicted RBP21.31■■□□□ 1
YBX3-202ENST00000279550 HNRNPA1P09651 372 aaKnown RBP eCLIP21.31■■□□□ 1
YBX3-202ENST00000279550 SERPINB9P50453 376 aa21.31■■□□□ 1
YBX3-202ENST00000279550 MGAT5Q09328 741 aa21.31■■□□□ 1
YBX3-202ENST00000279550 SPRED3Q2MJR0 410 aa21.31■■□□□ 1
YBX3-202ENST00000279550 PACS1Q6VY07 963 aa21.31■■□□□ 1
YBX3-202ENST00000279550 RASSF3Q86WH2 238 aa21.31■■□□□ 1
YBX3-202ENST00000279550 RNF38Q9H0F5 515 aa21.31■■□□□ 1
YBX3-202ENST00000279550 SLCO1B3Q9NPD5 702 aa21.31■■□□□ 1
YBX3-202ENST00000279550 RBM22Q9NW64 420 aaKnown RBP eCLIP21.31■■□□□ 17e-6■■■■□ 24.6
YBX3-202ENST00000279550 HBS1LQ9Y450 684 aaKnown RBP21.31■■□□□ 1
YBX3-202ENST00000279550 DRGXA6NNA5 263 aa21.3■■□□□ 1
YBX3-202ENST00000279550 MYO1CO00159 1063 aa21.3■■□□□ 1
YBX3-202ENST00000279550 RFXAPO00287 272 aa21.3■■□□□ 1
YBX3-202ENST00000279550 ATP9BO43861 1147 aa21.3■■□□□ 1
YBX3-202ENST00000279550 POLBP06746 335 aa21.3■■□□□ 1
YBX3-202ENST00000279550 DHRS4L1P0CG22 281 aa21.3■■□□□ 1
YBX3-202ENST00000279550 ETV4P43268 484 aa21.3■■□□□ 1
YBX3-202ENST00000279550 NRIP1P48552 1158 aa21.3■■□□□ 1
YBX3-202ENST00000279550 NPY2RP49146 381 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms