RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 NPWQ8N729 165 aa6.66□□□□□ -1.34
CD44-204ENST00000279452 PIP4K2CQ8TBX8 421 aa6.66□□□□□ -1.34
CD44-204ENST00000279452 FRS2Q8WU20 508 aa6.66□□□□□ -1.34
CD44-204ENST00000279452 RUBCNQ92622 972 aa6.66□□□□□ -1.34
CD44-204ENST00000279452 PIGKQ92643 395 aa6.66□□□□□ -1.34
CD44-204ENST00000279452 PTPRN2Q92932 1015 aa6.66□□□□□ -1.34
CD44-204ENST00000279452 RNF25Q96BH1 459 aaPredicted RBP6.66□□□□□ -1.34
CD44-204ENST00000279452 PPP1R16AQ96I34 528 aa6.66□□□□□ -1.34
CD44-204ENST00000279452 HSPA12BQ96MM6 686 aa6.66□□□□□ -1.34
CD44-204ENST00000279452 GDAP1L1Q96MZ0 367 aa6.66□□□□□ -1.34
CD44-204ENST00000279452 ZNF830Q96NB3 372 aaPredicted RBP6.66□□□□□ -1.34
CD44-204ENST00000279452 ZNF670Q9BS34 389 aa6.66□□□□□ -1.34
CD44-204ENST00000279452 GPR174Q9BXC1 333 aa6.66□□□□□ -1.34
CD44-204ENST00000279452 ACE2Q9BYF1 805 aaPredicted RBP6.66□□□□□ -1.34
CD44-204ENST00000279452 SLC39A8Q9C0K1 460 aa6.66□□□□□ -1.34
CD44-204ENST00000279452 BTBD1Q9H0C5 482 aa6.66□□□□□ -1.34
CD44-204ENST00000279452 MIR1-1HGQ9H1L0 117 aa6.66□□□□□ -1.34
CD44-204ENST00000279452 RSPH9Q9H1X1 276 aaPredicted RBP6.66□□□□□ -1.34
CD44-204ENST00000279452 ARRDC1-AS1Q9H2J1 176 aa6.66□□□□□ -1.34
CD44-204ENST00000279452 PABPC3Q9H361 631 aaKnown RBP6.66□□□□□ -1.34
CD44-204ENST00000279452 NOL6Q9H6R4 1146 aaKnown RBP6.66□□□□□ -1.34
CD44-204ENST00000279452 FBXL12Q9NXK8 326 aa6.66□□□□□ -1.34
CD44-204ENST00000279452 DDX56Q9NY93 547 aaKnown RBP6.66□□□□□ -1.34
CD44-204ENST00000279452 RCOR3Q9P2K3 495 aaPredicted RBP6.66□□□□□ -1.34
CD44-204ENST00000279452 HECAQ9UBI9 543 aaPredicted RBP6.66□□□□□ -1.34
CD44-204ENST00000279452 ZNF212Q9UDV6 495 aa6.66□□□□□ -1.34
CD44-204ENST00000279452 TRIM10Q9UDY6 481 aa6.66□□□□□ -1.34
CD44-204ENST00000279452 IL36AQ9UHA7 158 aa6.66□□□□□ -1.34
CD44-204ENST00000279452 MBD1Q9UIS9 605 aaPredicted RBP6.66□□□□□ -1.34
CD44-204ENST00000279452 REXO2Q9Y3B8 237 aaKnown RBP6.66□□□□□ -1.34
CD44-204ENST00000279452 TTLL3Q9Y4R7 772 aa6.66□□□□□ -1.34
CD44-204ENST00000279452 MUC22E2RYF6 1773 aaPredicted RBP6.66□□□□□ -1.34
CD44-204ENST00000279452 RCCD1A6NED2 376 aa6.65□□□□□ -1.34
CD44-204ENST00000279452 PROB1E7EW31 1015 aa6.65□□□□□ -1.34
CD44-204ENST00000279452 J3KR12 359 aa6.65□□□□□ -1.34
CD44-204ENST00000279452 APOL1O14791 398 aa6.65□□□□□ -1.34
CD44-204ENST00000279452 ARHGAP6O43182 974 aa6.65□□□□□ -1.34
CD44-204ENST00000279452 PSTPIP1O43586 416 aa6.65□□□□□ -1.34
CD44-204ENST00000279452 MFSD11O43934 449 aa6.65□□□□□ -1.34
CD44-204ENST00000279452 ZMPSTE24O75844 475 aa6.65□□□□□ -1.34
CD44-204ENST00000279452 FSBPO95073 299 aa6.65□□□□□ -1.34
CD44-204ENST00000279452 SEMA4FO95754 770 aa6.65□□□□□ -1.34
CD44-204ENST00000279452 PRNPP04156 253 aa6.65□□□□□ -1.34
CD44-204ENST00000279452 CFIP05156 583 aa6.65□□□□□ -1.34
CD44-204ENST00000279452 CCDC175P0C221 793 aa6.65□□□□□ -1.34
CD44-204ENST00000279452 C5AR1P21730 350 aa6.65□□□□□ -1.34
CD44-204ENST00000279452 KDELR1P24390 212 aa6.65□□□□□ -1.34
CD44-204ENST00000279452 GKP32189 559 aa6.65□□□□□ -1.34
CD44-204ENST00000279452 CHRNA3P32297 505 aa6.65□□□□□ -1.34
CD44-204ENST00000279452 MPLP40238 635 aa6.65□□□□□ -1.34
CD44-204ENST00000279452 PTGER3P43115 390 aa6.65□□□□□ -1.34
CD44-204ENST00000279452 CCNHP51946 323 aaPredicted RBP6.65□□□□□ -1.34
CD44-204ENST00000279452 SNRPD1P62314 119 aaKnown RBP6.65□□□□□ -1.34
CD44-204ENST00000279452 RAD51Q06609 339 aa6.65□□□□□ -1.34
CD44-204ENST00000279452 ITKQ08881 620 aa6.65□□□□□ -1.34
CD44-204ENST00000279452 ANKRD20A8PQ5CZ79 823 aa6.65□□□□□ -1.34
CD44-204ENST00000279452 CARD16Q5EG05 197 aa6.65□□□□□ -1.34
CD44-204ENST00000279452 ARSIQ5FYB1 569 aa6.65□□□□□ -1.34
CD44-204ENST00000279452 SYCP2LQ5T4T6 812 aa6.65□□□□□ -1.34
CD44-204ENST00000279452 ARTNQ5T4W7 220 aa6.65□□□□□ -1.34
CD44-204ENST00000279452 CCDC181Q5TID7 509 aa6.65□□□□□ -1.34
CD44-204ENST00000279452 PMS2CLQ68D20 193 aa6.65□□□□□ -1.34
CD44-204ENST00000279452 NCBP2-AS2Q69YL0 99 aa6.65□□□□□ -1.34
CD44-204ENST00000279452 C11orf63Q6NUN7 778 aa6.65□□□□□ -1.34
CD44-204ENST00000279452 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.65□□□□□ -1.34
CD44-204ENST00000279452 DPY19L3Q6ZPD9 716 aa6.65□□□□□ -1.34
CD44-204ENST00000279452 ARHGAP36Q6ZRI8 547 aa6.65□□□□□ -1.34
CD44-204ENST00000279452 PEX26Q7Z412 305 aa6.65□□□□□ -1.34
CD44-204ENST00000279452 METTL3Q86U44 580 aaKnown RBP6.65□□□□□ -1.34
CD44-204ENST00000279452 LRRC8AQ8IWT6 810 aa6.65□□□□□ -1.34
CD44-204ENST00000279452 TP53INP2Q8IXH6 220 aa6.65□□□□□ -1.34
CD44-204ENST00000279452 BBS5Q8N3I7 341 aa6.65□□□□□ -1.34
CD44-204ENST00000279452 DCLK2Q8N568 766 aa6.65□□□□□ -1.34
CD44-204ENST00000279452 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.65□□□□□ -1.34
CD44-204ENST00000279452 PCDH20Q8N6Y1 951 aaKnown RBP6.65□□□□□ -1.34
CD44-204ENST00000279452 C12orf50Q8NA57 414 aaPredicted RBP6.65□□□□□ -1.34
CD44-204ENST00000279452 SUMF1Q8NBK3 374 aa6.65□□□□□ -1.34
CD44-204ENST00000279452 CHST14Q8NCH0 376 aa6.65□□□□□ -1.34
CD44-204ENST00000279452 CCNYQ8ND76 341 aa6.65□□□□□ -1.34
CD44-204ENST00000279452 OR2AP1Q8NGE2 309 aa6.65□□□□□ -1.34
CD44-204ENST00000279452 OR2A12Q8NGT7 310 aa6.65□□□□□ -1.34
CD44-204ENST00000279452 OR14C36Q8NHC7 312 aa6.65□□□□□ -1.34
CD44-204ENST00000279452 TPCN2Q8NHX9 752 aa6.65□□□□□ -1.34
CD44-204ENST00000279452 KIAA1524Q8TCG1 905 aa6.65□□□□□ -1.34
CD44-204ENST00000279452 CASKIN2Q8WXE0 1202 aa6.65□□□□□ -1.34
CD44-204ENST00000279452 RAPGEF5Q92565 580 aa6.65□□□□□ -1.34
CD44-204ENST00000279452 FAM129BQ96TA1 746 aa6.65□□□□□ -1.34
CD44-204ENST00000279452 HEPHQ9BQS7 1158 aa6.65□□□□□ -1.34
CD44-204ENST00000279452 TSGA10Q9BZW7 698 aa6.65□□□□□ -1.34
CD44-204ENST00000279452 CEP44Q9C0F1 390 aa6.65□□□□□ -1.34
CD44-204ENST00000279452 LACRTQ9GZZ8 138 aa6.65□□□□□ -1.34
CD44-204ENST00000279452 KLC2Q9H0B6 622 aa6.65□□□□□ -1.34
CD44-204ENST00000279452 DUSP15Q9H1R2 295 aaPredicted RBP6.65□□□□□ -1.34
CD44-204ENST00000279452 SMOC1Q9H4F8 434 aa6.65□□□□□ -1.34
CD44-204ENST00000279452 LRRC19Q9H756 370 aa6.65□□□□□ -1.34
CD44-204ENST00000279452 CD248Q9HCU0 757 aa6.65□□□□□ -1.34
CD44-204ENST00000279452 LZTFL1Q9NQ48 299 aa6.65□□□□□ -1.34
CD44-204ENST00000279452 ITM2CQ9NQX7 267 aa6.65□□□□□ -1.34
CD44-204ENST00000279452 ETNK2Q9NVF9 386 aa6.65□□□□□ -1.34
CD44-204ENST00000279452 USP36Q9P275 1121 aaKnown RBP6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms