RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 CLEC14AQ86T13 490 aa13.15□□□□□ -0.3
C9orf3-201ENST00000277198 RTN4RL1Q86UN2 441 aaPredicted RBP13.15□□□□□ -0.3
C9orf3-201ENST00000277198 KBTBD2Q8IY47 623 aa13.15□□□□□ -0.3
C9orf3-201ENST00000277198 NME8Q8N427 588 aa13.15□□□□□ -0.3
C9orf3-201ENST00000277198 RDH11Q8TC12 318 aa13.15□□□□□ -0.3
C9orf3-201ENST00000277198 PHOSPHO2Q8TCD6 241 aa13.15□□□□□ -0.3
C9orf3-201ENST00000277198 CLPTM1LQ96KA5 538 aa13.15□□□□□ -0.3
C9orf3-201ENST00000277198 TSC22D3Q99576 134 aa13.15□□□□□ -0.3
C9orf3-201ENST00000277198 OSMRQ99650 979 aa13.15□□□□□ -0.3
C9orf3-201ENST00000277198 YIPF3Q9GZM5 350 aa13.15□□□□□ -0.3
C9orf3-201ENST00000277198 SLC28A3Q9HAS3 691 aa13.15□□□□□ -0.3
C9orf3-201ENST00000277198 LRRC4Q9HBW1 653 aa13.15□□□□□ -0.3
C9orf3-201ENST00000277198 NSMCE4AQ9NXX6 385 aa13.15□□□□□ -0.3
C9orf3-201ENST00000277198 RRN3Q9NYV6 651 aa13.15□□□□□ -0.3
C9orf3-201ENST00000277198 VANGL2Q9ULK5 521 aa13.15□□□□□ -0.3
C9orf3-201ENST00000277198 SSX2IPQ9Y2D8 614 aa13.15□□□□□ -0.3
C9orf3-201ENST00000277198 ARHGAP42A6NI28 874 aa13.14□□□□□ -0.31
C9orf3-201ENST00000277198 M0QYT0 321 aa13.14□□□□□ -0.31
C9orf3-201ENST00000277198 SPTLC1O15269 473 aa13.14□□□□□ -0.31
C9orf3-201ENST00000277198 ERVK-10P10266 1014 aa13.14□□□□□ -0.31
C9orf3-201ENST00000277198 ADSLP30566 484 aaPredicted RBP13.14□□□□□ -0.31
C9orf3-201ENST00000277198 ADRA1BP35368 520 aa13.14□□□□□ -0.31
C9orf3-201ENST00000277198 NUMBP49757 651 aa13.14□□□□□ -0.31
C9orf3-201ENST00000277198 CACNA2D1P54289 1103 aa13.14□□□□□ -0.31
C9orf3-201ENST00000277198 PPIDQ08752 370 aaKnown RBP13.14□□□□□ -0.31
C9orf3-201ENST00000277198 GLRA4Q5JXX5 417 aa13.14□□□□□ -0.31
C9orf3-201ENST00000277198 KCTD11Q693B1 232 aa13.14□□□□□ -0.31
C9orf3-201ENST00000277198 ITPRIPL1Q6GPH6 555 aa13.14□□□□□ -0.31
C9orf3-201ENST00000277198 IZUMO2Q6UXV1 221 aa13.14□□□□□ -0.31
C9orf3-201ENST00000277198 DHDDSQ86SQ9 333 aa13.14□□□□□ -0.31
C9orf3-201ENST00000277198 DCLK2Q8N568 766 aa13.14□□□□□ -0.31
C9orf3-201ENST00000277198 SLC7A14Q8TBB6 771 aa13.14□□□□□ -0.31
C9orf3-201ENST00000277198 PGAP3Q96FM1 320 aaPredicted RBP13.14□□□□□ -0.31
C9orf3-201ENST00000277198 LPIN3Q9BQK8 851 aa13.14□□□□□ -0.31
C9orf3-201ENST00000277198 ZBED2Q9BTP6 218 aa13.14□□□□□ -0.31
C9orf3-201ENST00000277198 CDH19Q9H159 772 aa13.14□□□□□ -0.31
C9orf3-201ENST00000277198 PNPOQ9NVS9 261 aa13.14□□□□□ -0.31
C9orf3-201ENST00000277198 IL1RAPL1Q9NZN1 696 aa13.14□□□□□ -0.31
C9orf3-201ENST00000277198 KLHL8Q9P2G9 620 aaPredicted RBP13.14□□□□□ -0.31
C9orf3-201ENST00000277198 ARHGAP26Q9UNA1 814 aa13.14□□□□□ -0.31
C9orf3-201ENST00000277198 TMEM265A0A087WTH1 108 aa13.14□□□□□ -0.31
C9orf3-201ENST00000277198 BUD23O43709 281 aaKnown RBP13.14□□□□□ -0.31
C9orf3-201ENST00000277198 TRIM13O60858 407 aa13.14□□□□□ -0.31
C9orf3-201ENST00000277198 SMIM24O75264 130 aa13.14□□□□□ -0.31
C9orf3-201ENST00000277198 PTPN3P26045 913 aa13.14□□□□□ -0.31
C9orf3-201ENST00000277198 MLH1P40692 756 aa13.14□□□□□ -0.31
C9orf3-201ENST00000277198 TUBP50607 506 aa13.14□□□□□ -0.31
C9orf3-201ENST00000277198 SLC25A3Q00325 362 aa13.14□□□□□ -0.31
C9orf3-201ENST00000277198 ZNF33AQ06730 810 aa13.14□□□□□ -0.31
C9orf3-201ENST00000277198 SEMA3BQ13214 749 aa13.14□□□□□ -0.31
C9orf3-201ENST00000277198 ITGA9Q13797 1035 aa13.14□□□□□ -0.31
C9orf3-201ENST00000277198 PPM1JQ5JR12 505 aa13.14□□□□□ -0.31
C9orf3-201ENST00000277198 FSTL4Q6MZW2 842 aa13.14□□□□□ -0.31
C9orf3-201ENST00000277198 STRA8Q7Z7C7 330 aa13.14□□□□□ -0.31
C9orf3-201ENST00000277198 SIX6OS1Q8N1H7 587 aa13.14□□□□□ -0.31
C9orf3-201ENST00000277198 ARHGAP18Q8N392 663 aa13.14□□□□□ -0.31
C9orf3-201ENST00000277198 GSTCDQ8NEC7 633 aa13.14□□□□□ -0.31
C9orf3-201ENST00000277198 ZNF483Q8TF39 744 aaPredicted RBP13.14□□□□□ -0.31
C9orf3-201ENST00000277198 HDAC11Q96DB2 347 aa13.14□□□□□ -0.31
C9orf3-201ENST00000277198 KCNK16Q96T55 309 aa13.14□□□□□ -0.31
C9orf3-201ENST00000277198 TTC1Q99614 292 aa13.14□□□□□ -0.31
C9orf3-201ENST00000277198 RTKNQ9BST9 563 aa13.14□□□□□ -0.31
C9orf3-201ENST00000277198 IL22Q9GZX6 179 aa13.14□□□□□ -0.31
C9orf3-201ENST00000277198 NXF3Q9H4D5 531 aaKnown RBP13.14□□□□□ -0.31
C9orf3-201ENST00000277198 SLC17A6Q9P2U8 582 aa13.14□□□□□ -0.31
C9orf3-201ENST00000277198 CDH22Q9UJ99 828 aa13.14□□□□□ -0.31
C9orf3-201ENST00000277198 PADI3Q9ULW8 664 aa13.14□□□□□ -0.31
C9orf3-201ENST00000277198 ANKRD6Q9Y2G4 727 aa13.14□□□□□ -0.31
C9orf3-201ENST00000277198 HES2Q9Y543 173 aa13.14□□□□□ -0.31
C9orf3-201ENST00000277198 SCN1AP35498 2009 aa13.13□□□□□ -0.31
C9orf3-201ENST00000277198 ZCWPW2A0A1B0GU75 182 aa13.13□□□□□ -0.31
C9orf3-201ENST00000277198 PSMD3O43242 534 aa13.13□□□□□ -0.31
C9orf3-201ENST00000277198 CREB3O43889 395 aa13.13□□□□□ -0.31
C9orf3-201ENST00000277198 MGEA5O60502 916 aa13.13□□□□□ -0.31
C9orf3-201ENST00000277198 PIM1P11309 404 aaPredicted RBP13.13□□□□□ -0.31
C9orf3-201ENST00000277198 TKTP29401 623 aaKnown RBP13.13□□□□□ -0.31
C9orf3-201ENST00000277198 LILRA4P59901 499 aa13.13□□□□□ -0.31
C9orf3-201ENST00000277198 CDC16Q13042 620 aa13.13□□□□□ -0.31
C9orf3-201ENST00000277198 ARL13BQ3SXY8 428 aa13.13□□□□□ -0.31
C9orf3-201ENST00000277198 ANKRD20A4Q4UJ75 823 aa13.13□□□□□ -0.31
C9orf3-201ENST00000277198 CFAP157Q5JU67 520 aa13.13□□□□□ -0.31
C9orf3-201ENST00000277198 BSPRYQ5W0U4 402 aa13.13□□□□□ -0.31
C9orf3-201ENST00000277198 ZFAND2BQ8WV99 257 aa13.13□□□□□ -0.31
C9orf3-201ENST00000277198 CNDP1Q96KN2 507 aa13.13□□□□□ -0.31
C9orf3-201ENST00000277198 FCRL3Q96P31 734 aaPredicted RBP13.13□□□□□ -0.31
C9orf3-201ENST00000277198 MCMBPQ9BTE3 642 aa13.13□□□□□ -0.31
C9orf3-201ENST00000277198 GBA3Q9H227 469 aa13.13□□□□□ -0.31
C9orf3-201ENST00000277198 SEPT10Q9P0V9 454 aa13.13□□□□□ -0.31
C9orf3-201ENST00000277198 PPM1HQ9ULR3 514 aa13.13□□□□□ -0.31
C9orf3-201ENST00000277198 A0A096LPK6 155 aa13.12□□□□□ -0.31
C9orf3-201ENST00000277198 SLCO1B7G3V0H7 640 aa13.12□□□□□ -0.31
C9orf3-201ENST00000277198 G3V2L1 256 aa13.12□□□□□ -0.31
C9orf3-201ENST00000277198 ENPP3O14638 875 aa13.12□□□□□ -0.31
C9orf3-201ENST00000277198 GABRDO14764 452 aa13.12□□□□□ -0.31
C9orf3-201ENST00000277198 HCRTO43612 131 aa13.12□□□□□ -0.31
C9orf3-201ENST00000277198 PEX1O43933 1283 aa13.12□□□□□ -0.31
C9orf3-201ENST00000277198 SNUPNO95149 360 aaKnown RBP13.12□□□□□ -0.31
C9orf3-201ENST00000277198 HSPA4LO95757 839 aa13.12□□□□□ -0.31
C9orf3-201ENST00000277198 BAG2O95816 211 aa13.12□□□□□ -0.31
C9orf3-201ENST00000277198 F9P00740 461 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms