RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 TRIM16O95361 564 aa14.55□□□□□ -0.08
TMEM47-201ENST00000275954 URODP06132 367 aa14.55□□□□□ -0.08
TMEM47-201ENST00000275954 CCDC166P0CW27 439 aa14.55□□□□□ -0.08
TMEM47-201ENST00000275954 MRPS35P82673 323 aaKnown RBP14.55□□□□□ -0.08
TMEM47-201ENST00000275954 SLC34A1Q06495 639 aa14.55□□□□□ -0.08
TMEM47-201ENST00000275954 PRKAA1Q13131 559 aa14.55□□□□□ -0.08
TMEM47-201ENST00000275954 KLF1Q13351 362 aaPredicted RBP14.55□□□□□ -0.08
TMEM47-201ENST00000275954 SIX1Q15475 284 aaPredicted RBP14.55□□□□□ -0.08
TMEM47-201ENST00000275954 CCDC153Q494R4 210 aa14.55□□□□□ -0.08
TMEM47-201ENST00000275954 WASHC2DQ5SRD0 308 aa14.55□□□□□ -0.08
TMEM47-201ENST00000275954 TAPT1Q6NXT6 567 aa14.55□□□□□ -0.08
TMEM47-201ENST00000275954 LDB1Q86U70 411 aaPredicted RBP14.55□□□□□ -0.08
TMEM47-201ENST00000275954 IGDCC3Q8IVU1 814 aa14.55□□□□□ -0.08
TMEM47-201ENST00000275954 ARHGAP18Q8N392 663 aa14.55□□□□□ -0.08
TMEM47-201ENST00000275954 DIS3LQ8TF46 1054 aaKnown RBP14.55□□□□□ -0.08
TMEM47-201ENST00000275954 SYT11Q9BT88 431 aa14.55□□□□□ -0.08
TMEM47-201ENST00000275954 ALG9Q9H6U8 611 aa14.55□□□□□ -0.08
TMEM47-201ENST00000275954 ATP13A1Q9HD20 1204 aa14.55□□□□□ -0.08
TMEM47-201ENST00000275954 XPR1Q9UBH6 696 aa14.55□□□□□ -0.08
TMEM47-201ENST00000275954 WARS2Q9UGM6 360 aaKnown RBP14.55□□□□□ -0.08
TMEM47-201ENST00000275954 BCLAF3A2AJT9 711 aaKnown RBP14.55□□□□□ -0.08
TMEM47-201ENST00000275954 C2orf81A6NN90 581 aa14.55□□□□□ -0.08
TMEM47-201ENST00000275954 KPNA6O60684 536 aa14.55□□□□□ -0.08
TMEM47-201ENST00000275954 PAGE1O75459 146 aa14.55□□□□□ -0.08
TMEM47-201ENST00000275954 DAB1O75553 588 aa14.55□□□□□ -0.08
TMEM47-201ENST00000275954 BPGMP07738 259 aa14.55□□□□□ -0.08
TMEM47-201ENST00000275954 CDH13P55290 713 aa14.55□□□□□ -0.08
TMEM47-201ENST00000275954 RAD51Q06609 339 aa14.55□□□□□ -0.08
TMEM47-201ENST00000275954 STX5Q13190 355 aa14.55□□□□□ -0.08
TMEM47-201ENST00000275954 HS6ST3Q8IZP7 471 aa14.55□□□□□ -0.08
TMEM47-201ENST00000275954 CFAP52Q8N1V2 620 aa14.55□□□□□ -0.08
TMEM47-201ENST00000275954 KYQ8NBH2 561 aa14.55□□□□□ -0.08
TMEM47-201ENST00000275954 FBXO44Q9H4M3 255 aa14.55□□□□□ -0.08
TMEM47-201ENST00000275954 DSG1Q02413 1049 aa14.55□□□□□ -0.08
TMEM47-201ENST00000275954 LRRC74BQ6ZQY2 392 aa14.55□□□□□ -0.08
TMEM47-201ENST00000275954 SZRD1Q7Z422 152 aa14.55□□□□□ -0.08
TMEM47-201ENST00000275954 ELMOD1Q8N336 334 aa14.55□□□□□ -0.08
TMEM47-201ENST00000275954 TOP6BLQ8N6T0 577 aa14.55□□□□□ -0.08
TMEM47-201ENST00000275954 DDI1Q8WTU0 396 aa14.55□□□□□ -0.08
TMEM47-201ENST00000275954 VAT1Q99536 393 aa14.55□□□□□ -0.08
TMEM47-201ENST00000275954 POMKQ9H5K3 350 aa14.55□□□□□ -0.08
TMEM47-201ENST00000275954 TLR8Q9NR97 1041 aaKnown RBP14.55□□□□□ -0.08
TMEM47-201ENST00000275954 FBXO5Q9UKT4 447 aa14.55□□□□□ -0.08
TMEM47-201ENST00000275954 hCG_2014768A0A024R1R8 64 aa14.54□□□□□ -0.08
TMEM47-201ENST00000275954 UBDO15205 165 aa14.54□□□□□ -0.08
TMEM47-201ENST00000275954 MPOP05164 745 aa14.54□□□□□ -0.08
TMEM47-201ENST00000275954 L1CAMP32004 1257 aa14.54□□□□□ -0.08
TMEM47-201ENST00000275954 CTNNB1P35222 781 aa14.54□□□□□ -0.08
TMEM47-201ENST00000275954 GRIA4P48058 902 aa14.54□□□□□ -0.08
TMEM47-201ENST00000275954 PITX1P78337 314 aaPredicted RBP14.54□□□□□ -0.08
TMEM47-201ENST00000275954 CDCA2Q69YH5 1023 aaPredicted RBP14.54□□□□□ -0.08
TMEM47-201ENST00000275954 LRRC8DQ7L1W4 858 aa14.54□□□□□ -0.08
TMEM47-201ENST00000275954 OR52K2Q8NGK3 314 aa14.54□□□□□ -0.08
TMEM47-201ENST00000275954 SEC14L1Q92503 715 aa14.54□□□□□ -0.08
TMEM47-201ENST00000275954 AGAP2Q99490 1192 aa14.54□□□□□ -0.08
TMEM47-201ENST00000275954 SEMA3CQ99985 751 aa14.54□□□□□ -0.08
TMEM47-201ENST00000275954 TRIM15Q9C019 465 aa14.54□□□□□ -0.08
TMEM47-201ENST00000275954 MRPL40Q9NQ50 206 aaKnown RBP14.54□□□□□ -0.08
TMEM47-201ENST00000275954 TRPM5Q9NZQ8 1165 aa14.54□□□□□ -0.08
TMEM47-201ENST00000275954 MORF4L1Q9UBU8 362 aa14.54□□□□□ -0.08
TMEM47-201ENST00000275954 CRLS1Q9UJA2 301 aa14.54□□□□□ -0.08
TMEM47-201ENST00000275954 SLC8A2Q9UPR5 921 aa14.54□□□□□ -0.08
TMEM47-201ENST00000275954 CLUHO75153 1309 aa14.54□□□□□ -0.08
TMEM47-201ENST00000275954 THSD7AQ9UPZ6 1657 aa14.54□□□□□ -0.08
TMEM47-201ENST00000275954 BAIAP3O94812 1187 aa14.54□□□□□ -0.08
TMEM47-201ENST00000275954 IQCF3P0C7M6 154 aa14.54□□□□□ -0.08
TMEM47-201ENST00000275954 NNMTP40261 264 aa14.54□□□□□ -0.08
TMEM47-201ENST00000275954 RAB27AP51159 221 aa14.54□□□□□ -0.08
TMEM47-201ENST00000275954 PEX6Q13608 980 aa14.54□□□□□ -0.08
TMEM47-201ENST00000275954 DDX39BQ13838 428 aaKnown RBP14.54□□□□□ -0.08
TMEM47-201ENST00000275954 TBCCQ15814 346 aa14.54□□□□□ -0.08
TMEM47-201ENST00000275954 PSMD5Q16401 504 aa14.54□□□□□ -0.08
TMEM47-201ENST00000275954 LACTB2Q53H82 288 aaPredicted RBP14.54□□□□□ -0.08
TMEM47-201ENST00000275954 TEX44Q53QW1 395 aa14.54□□□□□ -0.08
TMEM47-201ENST00000275954 DQX1Q8TE96 717 aaKnown RBP14.54□□□□□ -0.08
TMEM47-201ENST00000275954 SNX19Q92543 992 aa14.54□□□□□ -0.08
TMEM47-201ENST00000275954 ABTB1Q969K4 478 aaPredicted RBP14.54□□□□□ -0.08
TMEM47-201ENST00000275954 CASS4Q9NQ75 786 aa14.54□□□□□ -0.08
TMEM47-201ENST00000275954 PDLIM7Q9NR12 457 aa14.54□□□□□ -0.08
TMEM47-201ENST00000275954 TBC1D13Q9NVG8 400 aa14.54□□□□□ -0.08
TMEM47-201ENST00000275954 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.54□□□□□ -0.08
TMEM47-201ENST00000275954 LSM7Q9UK45 103 aaKnown RBP14.54□□□□□ -0.08
TMEM47-201ENST00000275954 SH3BP1Q9Y3L3 701 aa14.54□□□□□ -0.08
TMEM47-201ENST00000275954 MYH7BA7E2Y1 1941 aa14.54□□□□□ -0.08
TMEM47-201ENST00000275954 MRPS22P82650 360 aaKnown RBP14.54□□□□□ -0.08
TMEM47-201ENST00000275954 PREPLQ4J6C6 727 aaPredicted RBP14.54□□□□□ -0.08
TMEM47-201ENST00000275954 THEMIS2Q5TEJ8 643 aa14.54□□□□□ -0.08
TMEM47-201ENST00000275954 LZTR1Q8N653 840 aa14.54□□□□□ -0.08
TMEM47-201ENST00000275954 NIPA2Q8N8Q9 360 aa14.54□□□□□ -0.08
TMEM47-201ENST00000275954 PBXIP1Q96AQ6 731 aa14.54□□□□□ -0.08
TMEM47-201ENST00000275954 CNDP1Q96KN2 507 aa14.54□□□□□ -0.08
TMEM47-201ENST00000275954 PHACTR1Q9C0D0 580 aa14.54□□□□□ -0.08
TMEM47-201ENST00000275954 ADAMTS7Q9UKP4 1686 aa14.54□□□□□ -0.08
TMEM47-201ENST00000275954 GUCA1CO95843 209 aa14.53□□□□□ -0.08
TMEM47-201ENST00000275954 RBP1P09455 135 aa14.53□□□□□ -0.08
TMEM47-201ENST00000275954 PTPN9P43378 593 aa14.53□□□□□ -0.08
TMEM47-201ENST00000275954 WNT3AP56704 352 aa14.53□□□□□ -0.08
TMEM47-201ENST00000275954 PCID2Q5JVF3 399 aa14.53□□□□□ -0.08
TMEM47-201ENST00000275954 SETD3Q86TU7 594 aaPredicted RBP14.53□□□□□ -0.08
TMEM47-201ENST00000275954 CAAP1Q9H8G2 361 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms