RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 C9orf50Q5SZB4 431 aa12.33□□□□□ -0.44
SDE2-201ENST00000272091 ZNF771Q7L3S4 317 aaPredicted RBP12.33□□□□□ -0.44
SDE2-201ENST00000272091 MGARPQ8TDB4 240 aa12.33□□□□□ -0.44
SDE2-201ENST00000272091 PABPC5Q96DU9 382 aaKnown RBP12.33□□□□□ -0.44
SDE2-201ENST00000272091 ZNF317Q96PQ6 595 aaPredicted RBP12.33□□□□□ -0.44
SDE2-201ENST00000272091 CCDC134Q9H6E4 229 aa12.33□□□□□ -0.44
SDE2-201ENST00000272091 SP110Q9HB58 689 aa12.33□□□□□ -0.44
SDE2-201ENST00000272091 ATP13A1Q9HD20 1204 aa12.33□□□□□ -0.44
SDE2-201ENST00000272091 ZNF180Q9UJW8 692 aa12.33□□□□□ -0.44
SDE2-201ENST00000272091 PSAT1Q9Y617 370 aa12.33□□□□□ -0.44
SDE2-201ENST00000272091 LAMA3Q16787 3333 aa12.33□□□□□ -0.44
SDE2-201ENST00000272091 SRRM3A6NNA2 597 aaPredicted RBP12.32□□□□□ -0.44
SDE2-201ENST00000272091 GRM6O15303 877 aa12.32□□□□□ -0.44
SDE2-201ENST00000272091 GNA12Q03113 381 aa12.32□□□□□ -0.44
SDE2-201ENST00000272091 PRPSAP1Q14558 356 aa12.32□□□□□ -0.44
SDE2-201ENST00000272091 MICALCLQ6ZW33 695 aa12.32□□□□□ -0.44
SDE2-201ENST00000272091 LRRC6Q86X45 466 aa12.32□□□□□ -0.44
SDE2-201ENST00000272091 FAM217AQ8IXS0 508 aa12.32□□□□□ -0.44
SDE2-201ENST00000272091 ANKRD42Q8N9B4 389 aa12.32□□□□□ -0.44
SDE2-201ENST00000272091 IPMKQ8NFU5 416 aa12.32□□□□□ -0.44
SDE2-201ENST00000272091 ATP2A3Q93084 1043 aa12.32□□□□□ -0.44
SDE2-201ENST00000272091 ZNF778Q96MU6 729 aa12.32□□□□□ -0.44
SDE2-201ENST00000272091 KLF6Q99612 283 aaPredicted RBP12.32□□□□□ -0.44
SDE2-201ENST00000272091 SLC25A51Q9H1U9 297 aa12.32□□□□□ -0.44
SDE2-201ENST00000272091 KCNK9Q9NPC2 374 aa12.32□□□□□ -0.44
SDE2-201ENST00000272091 INTS9Q9NV88 658 aaKnown RBP12.32□□□□□ -0.44
SDE2-201ENST00000272091 AAR2Q9Y312 384 aaKnown RBP12.32□□□□□ -0.44
SDE2-201ENST00000272091 LRG1P02750 347 aa12.32□□□□□ -0.44
SDE2-201ENST00000272091 MSLNQ13421 630 aaPredicted RBP12.32□□□□□ -0.44
SDE2-201ENST00000272091 MAB21L3Q8N8X9 362 aa12.32□□□□□ -0.44
SDE2-201ENST00000272091 TTC17Q96AE7 1141 aa12.32□□□□□ -0.44
SDE2-201ENST00000272091 TLR9Q9NR96 1032 aa12.32□□□□□ -0.44
SDE2-201ENST00000272091 CHRAC1Q9NRG0 131 aa12.32□□□□□ -0.44
SDE2-201ENST00000272091 CDH23Q9H251 3354 aa12.32□□□□□ -0.44
SDE2-201ENST00000272091 A0A1W2PRU2 124 aa12.32□□□□□ -0.44
SDE2-201ENST00000272091 MOSPD3O75425 235 aa12.32□□□□□ -0.44
SDE2-201ENST00000272091 ANXA9O76027 345 aa12.32□□□□□ -0.44
SDE2-201ENST00000272091 F7P08709 466 aaPredicted RBP12.32□□□□□ -0.44
SDE2-201ENST00000272091 CHRNA4P43681 627 aa12.32□□□□□ -0.44
SDE2-201ENST00000272091 RENBPP51606 427 aa12.32□□□□□ -0.44
SDE2-201ENST00000272091 CDH17Q12864 832 aa12.32□□□□□ -0.44
SDE2-201ENST00000272091 QPCTQ16769 361 aa12.32□□□□□ -0.44
SDE2-201ENST00000272091 RABGAP1LQ5R372 815 aa12.32□□□□□ -0.44
SDE2-201ENST00000272091 MARC1Q5VT66 337 aa12.32□□□□□ -0.44
SDE2-201ENST00000272091 NAPEPLDQ6IQ20 393 aa12.32□□□□□ -0.44
SDE2-201ENST00000272091 RANBP10Q6VN20 620 aa12.32□□□□□ -0.44
SDE2-201ENST00000272091 CCDC149Q6ZUS6 474 aa12.32□□□□□ -0.44
SDE2-201ENST00000272091 MARK2Q7KZI7 788 aaKnown RBP12.32□□□□□ -0.44
SDE2-201ENST00000272091 CHST9Q7L1S5 443 aa12.32□□□□□ -0.44
SDE2-201ENST00000272091 CTAGE3PQ8IX95 158 aa12.32□□□□□ -0.44
SDE2-201ENST00000272091 DNAAF3Q8N9W5 541 aa12.32□□□□□ -0.44
SDE2-201ENST00000272091 MFSD3Q96ES6 412 aa12.32□□□□□ -0.44
SDE2-201ENST00000272091 TBC1D30Q9Y2I9 924 aa12.32□□□□□ -0.44
SDE2-201ENST00000272091 RFPL2O75678 378 aa12.31□□□□□ -0.44
SDE2-201ENST00000272091 GLUD1P00367 558 aa12.31□□□□□ -0.44
SDE2-201ENST00000272091 KRT4P19013 534 aa12.31□□□□□ -0.44
SDE2-201ENST00000272091 HDCP19113 662 aa12.31□□□□□ -0.44
SDE2-201ENST00000272091 RPA3P35244 121 aaPredicted RBP12.31□□□□□ -0.44
SDE2-201ENST00000272091 ETFBP38117 255 aa12.31□□□□□ -0.44
SDE2-201ENST00000272091 NPY2RP49146 381 aa12.31□□□□□ -0.44
SDE2-201ENST00000272091 GEMP55040 296 aa12.31□□□□□ -0.44
SDE2-201ENST00000272091 LBRQ14739 615 aaKnown RBP12.31□□□□□ -0.44
SDE2-201ENST00000272091 FSCBQ5H9T9 825 aa12.31□□□□□ -0.44
SDE2-201ENST00000272091 POTEHQ6S545 545 aa12.31□□□□□ -0.44
SDE2-201ENST00000272091 CCNJLQ8IV13 435 aa12.31□□□□□ -0.44
SDE2-201ENST00000272091 BANPQ8N9N5 519 aa12.31□□□□□ -0.44
SDE2-201ENST00000272091 RIN3Q8TB24 985 aa12.31□□□□□ -0.44
SDE2-201ENST00000272091 WFDC5Q8TCV5 224 aa12.31□□□□□ -0.44
SDE2-201ENST00000272091 EMILIN2Q9BXX0 1053 aa12.31□□□□□ -0.44
SDE2-201ENST00000272091 C12orf65Q9H3J6 166 aaKnown RBP12.31□□□□□ -0.44
SDE2-201ENST00000272091 DONSONQ9NYP3 566 aa12.31□□□□□ -0.44
SDE2-201ENST00000272091 SOX13Q9UN79 622 aa12.31□□□□□ -0.44
SDE2-201ENST00000272091 RPS6KL1Q9Y6S9 549 aa12.31□□□□□ -0.44
SDE2-201ENST00000272091 GOLGA8RI6L899 631 aa12.31□□□□□ -0.44
SDE2-201ENST00000272091 PSMD3O43242 534 aa12.31□□□□□ -0.44
SDE2-201ENST00000272091 ATP9BO43861 1147 aa12.31□□□□□ -0.44
SDE2-201ENST00000272091 PMPCBO75439 489 aa12.31□□□□□ -0.44
SDE2-201ENST00000272091 USP1O94782 785 aa12.31□□□□□ -0.44
SDE2-201ENST00000272091 INHBAP08476 426 aa12.31□□□□□ -0.44
SDE2-201ENST00000272091 ERVK-10P10266 1014 aa12.31□□□□□ -0.44
SDE2-201ENST00000272091 NMBRP28336 390 aa12.31□□□□□ -0.44
SDE2-201ENST00000272091 SLC7A9P82251 487 aa12.31□□□□□ -0.44
SDE2-201ENST00000272091 BMPR2Q13873 1038 aa12.31□□□□□ -0.44
SDE2-201ENST00000272091 SLC1A5Q15758 541 aa12.31□□□□□ -0.44
SDE2-201ENST00000272091 PABPC1LQ4VXU2 614 aaKnown RBP12.31□□□□□ -0.44
SDE2-201ENST00000272091 SPANXN3Q5MJ09 141 aa12.31□□□□□ -0.44
SDE2-201ENST00000272091 BCAS4Q8TDM0 211 aa12.31□□□□□ -0.44
SDE2-201ENST00000272091 MAGEH1Q9H213 219 aa12.31□□□□□ -0.44
SDE2-201ENST00000272091 RETREG1Q9H6L5 497 aa12.31□□□□□ -0.44
SDE2-201ENST00000272091 SSU72Q9NP77 194 aaKnown RBP12.31□□□□□ -0.44
SDE2-201ENST00000272091 FAM237BA0A1B0GVD1 139 aa12.31□□□□□ -0.44
SDE2-201ENST00000272091 CLDN11O75508 207 aa12.31□□□□□ -0.44
SDE2-201ENST00000272091 LATS1O95835 1130 aa12.31□□□□□ -0.44
SDE2-201ENST00000272091 CD160O95971 181 aa12.31□□□□□ -0.44
SDE2-201ENST00000272091 CD86P42081 329 aa12.31□□□□□ -0.44
SDE2-201ENST00000272091 ANKRD20A4Q4UJ75 823 aa12.31□□□□□ -0.44
SDE2-201ENST00000272091 ZNF669Q96BR6 464 aaPredicted RBP12.31□□□□□ -0.44
SDE2-201ENST00000272091 TCEAL4Q96EI5 215 aa12.31□□□□□ -0.44
SDE2-201ENST00000272091 CORO1BQ9BR76 489 aa12.31□□□□□ -0.44
SDE2-201ENST00000272091 NAT9Q9BTE0 207 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms