RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 MYBPHLA2RUH7 354 aa17.06■□□□□ 0.32
SQLE-201ENST00000265896 MATN2O00339 956 aa17.06■□□□□ 0.32
SQLE-201ENST00000265896 DLX3O60479 287 aa17.06■□□□□ 0.32
SQLE-201ENST00000265896 MOCS2O96007 188 aaPredicted RBP17.06■□□□□ 0.32
SQLE-201ENST00000265896 PRAMEP78395 509 aa17.06■□□□□ 0.32
SQLE-201ENST00000265896 CACNB2Q08289 660 aaPredicted RBP17.06■□□□□ 0.32
SQLE-201ENST00000265896 CSHL1Q14406 222 aa17.06■□□□□ 0.32
SQLE-201ENST00000265896 ZNF484Q5JVG2 852 aa17.06■□□□□ 0.32
SQLE-201ENST00000265896 TAPT1Q6NXT6 567 aa17.06■□□□□ 0.32
SQLE-201ENST00000265896 PAQR9Q6ZVX9 377 aa17.06■□□□□ 0.32
SQLE-201ENST00000265896 MYO1HQ8N1T3 1032 aa17.06■□□□□ 0.32
SQLE-201ENST00000265896 EZH1Q92800 747 aaPredicted RBP17.06■□□□□ 0.32
SQLE-201ENST00000265896 OXSMQ9NWU1 459 aa17.06■□□□□ 0.32
SQLE-201ENST00000265896 RHBDL2Q9NX52 303 aa17.06■□□□□ 0.32
SQLE-201ENST00000265896 PTGDR2Q9Y5Y4 395 aa17.06■□□□□ 0.32
SQLE-201ENST00000265896 COPG1Q9Y678 874 aaKnown RBP17.06■□□□□ 0.32
SQLE-201ENST00000265896 PAPPA2Q9BXP8 1791 aa17.06■□□□□ 0.32
SQLE-201ENST00000265896 H3BSA7 217 aa17.06■□□□□ 0.32
SQLE-201ENST00000265896 HDAC3O15379 428 aa17.06■□□□□ 0.32
SQLE-201ENST00000265896 FOXD2O60548 495 aaPredicted RBP17.06■□□□□ 0.32
SQLE-201ENST00000265896 UGT1A6P19224 532 aa17.06■□□□□ 0.32
SQLE-201ENST00000265896 CDH15P55291 814 aa17.06■□□□□ 0.32
SQLE-201ENST00000265896 MYBPC1Q00872 1141 aa17.06■□□□□ 0.32
SQLE-201ENST00000265896 SNAPC2Q13487 334 aa17.06■□□□□ 0.32
SQLE-201ENST00000265896 CEP70Q8NHQ1 597 aa17.06■□□□□ 0.32
SQLE-201ENST00000265896 OPTNQ96CV9 577 aa17.06■□□□□ 0.32
SQLE-201ENST00000265896 FAM192AQ9GZU8 254 aa17.06■□□□□ 0.32
SQLE-201ENST00000265896 BRD8Q9H0E9 1235 aa17.06■□□□□ 0.32
SQLE-201ENST00000265896 TKTL2Q9H0I9 626 aa17.06■□□□□ 0.32
SQLE-201ENST00000265896 FBRSL1Q9HCM7 1045 aaKnown RBP17.06■□□□□ 0.32
SQLE-201ENST00000265896 DMAP1Q9NPF5 467 aaPredicted RBP17.06■□□□□ 0.32
SQLE-201ENST00000265896 TTC3P53804 2025 aa17.05■□□□□ 0.32
SQLE-201ENST00000265896 DYNC1LI2O43237 492 aaPredicted RBP17.05■□□□□ 0.32
SQLE-201ENST00000265896 YBX3P16989 372 aaKnown RBP eCLIP17.05■□□□□ 0.322e-8■□□□□ 10.4
SQLE-201ENST00000265896 GLDCP23378 1020 aa17.05■□□□□ 0.32
SQLE-201ENST00000265896 ADRA1BP35368 520 aa17.05■□□□□ 0.32
SQLE-201ENST00000265896 MYLK3Q32MK0 819 aa17.05■□□□□ 0.32
SQLE-201ENST00000265896 CLEC6AQ6EIG7 209 aa17.05■□□□□ 0.32
SQLE-201ENST00000265896 CLEC20AQ6ZU45 233 aa17.05■□□□□ 0.32
SQLE-201ENST00000265896 LSMEM2Q8N112 164 aa17.05■□□□□ 0.32
SQLE-201ENST00000265896 RYBPQ8N488 228 aaPredicted RBP17.05■□□□□ 0.32
SQLE-201ENST00000265896 SH3RF2Q8TEC5 729 aa17.05■□□□□ 0.32
SQLE-201ENST00000265896 LPPQ93052 612 aa17.05■□□□□ 0.32
SQLE-201ENST00000265896 HIC2Q96JB3 615 aa17.05■□□□□ 0.32
SQLE-201ENST00000265896 MPHOSPH6Q99547 160 aaKnown RBP17.05■□□□□ 0.32
SQLE-201ENST00000265896 PAAF1Q9BRP4 392 aa17.05■□□□□ 0.32
SQLE-201ENST00000265896 RTKNQ9BST9 563 aa17.05■□□□□ 0.32
SQLE-201ENST00000265896 SFMBT1Q9UHJ3 866 aa17.05■□□□□ 0.32
SQLE-201ENST00000265896 RGSL1A5PLK6 1076 aa17.05■□□□□ 0.32
SQLE-201ENST00000265896 SEC24DO94855 1032 aaPredicted RBP17.05■□□□□ 0.32
SQLE-201ENST00000265896 AP2A1O95782 977 aa17.05■□□□□ 0.32
SQLE-201ENST00000265896 PGK1P00558 417 aa17.05■□□□□ 0.32
SQLE-201ENST00000265896 SLC35E2BP0CK96 405 aa17.05■□□□□ 0.32
SQLE-201ENST00000265896 HNRNPDQ14103 355 aaKnown RBP17.05■□□□□ 0.32
SQLE-201ENST00000265896 CCDC153Q494R4 210 aa17.05■□□□□ 0.32
SQLE-201ENST00000265896 SPANXN3Q5MJ09 141 aa17.05■□□□□ 0.32
SQLE-201ENST00000265896 SLC27A1Q6PCB7 646 aa17.05■□□□□ 0.32
SQLE-201ENST00000265896 CENPLQ8N0S6 344 aaPredicted RBP17.05■□□□□ 0.32
SQLE-201ENST00000265896 CNTD1Q8N815 330 aa17.05■□□□□ 0.32
SQLE-201ENST00000265896 ZFP28Q8NHY6 868 aa17.05■□□□□ 0.32
SQLE-201ENST00000265896 LRTOMTQ8WZ04 291 aa17.05■□□□□ 0.32
SQLE-201ENST00000265896 EMID1Q96A84 441 aaPredicted RBP17.05■□□□□ 0.32
SQLE-201ENST00000265896 EME1Q96AY2 570 aa17.05■□□□□ 0.32
SQLE-201ENST00000265896 ELMO2Q96JJ3 720 aa17.05■□□□□ 0.32
SQLE-201ENST00000265896 MRPL1Q9BYD6 325 aaKnown RBP17.05■□□□□ 0.32
SQLE-201ENST00000265896 TRPC7Q9HCX4 862 aa17.05■□□□□ 0.32
SQLE-201ENST00000265896 NDFIP2Q9NV92 336 aa17.05■□□□□ 0.32
SQLE-201ENST00000265896 STK39Q9UEW8 545 aa17.05■□□□□ 0.32
SQLE-201ENST00000265896 OR12D3Q9UGF7 316 aa17.05■□□□□ 0.32
SQLE-201ENST00000265896 PSMD13Q9UNM6 376 aa17.05■□□□□ 0.32
SQLE-201ENST00000265896 SORCS3Q9UPU3 1222 aa17.05■□□□□ 0.32
SQLE-201ENST00000265896 SNX13Q9Y5W8 968 aa17.05■□□□□ 0.32
SQLE-201ENST00000265896 FAM149AA5PLN7 773 aa17.04■□□□□ 0.32
SQLE-201ENST00000265896 THRAP10827 490 aa17.04■□□□□ 0.32
SQLE-201ENST00000265896 MLNP12872 115 aa17.04■□□□□ 0.32
SQLE-201ENST00000265896 CKMT2P17540 419 aa17.04■□□□□ 0.32
SQLE-201ENST00000265896 LILRA4P59901 499 aa17.04■□□□□ 0.32
SQLE-201ENST00000265896 ZNF423Q2M1K9 1284 aa17.04■□□□□ 0.32
SQLE-201ENST00000265896 RBM20Q5T481 1227 aaKnown RBP17.04■□□□□ 0.32
SQLE-201ENST00000265896 ZNF772Q68DY9 489 aaPredicted RBP17.04■□□□□ 0.32
SQLE-201ENST00000265896 KLHDC10Q6PID8 442 aa17.04■□□□□ 0.32
SQLE-201ENST00000265896 MAMDC4Q6UXC1 1216 aa17.04■□□□□ 0.32
SQLE-201ENST00000265896 EXOC8Q8IYI6 725 aa17.04■□□□□ 0.32
SQLE-201ENST00000265896 WNT8BQ93098 351 aa17.04■□□□□ 0.32
SQLE-201ENST00000265896 PPWD1Q96BP3 646 aaKnown RBP17.04■□□□□ 0.32
SQLE-201ENST00000265896 CIB1Q99828 191 aa17.04■□□□□ 0.32
SQLE-201ENST00000265896 DNAJC25-GNG10A0A024R161 153 aa17.04■□□□□ 0.32
SQLE-201ENST00000265896 DCLK1O15075 740 aa17.04■□□□□ 0.32
SQLE-201ENST00000265896 VILLO15195 856 aa17.04■□□□□ 0.32
SQLE-201ENST00000265896 YWHAQP27348 245 aa17.04■□□□□ 0.32
SQLE-201ENST00000265896 CNSTQ6PJW8 725 aa17.04■□□□□ 0.32
SQLE-201ENST00000265896 TSNARE1Q96NA8 513 aa17.04■□□□□ 0.32
SQLE-201ENST00000265896 TRPV6Q9H1D0 765 aa17.04■□□□□ 0.32
SQLE-201ENST00000265896 VPS33BQ9H267 617 aa17.04■□□□□ 0.32
SQLE-201ENST00000265896 PLEKHA5Q9HAU0 1116 aa17.04■□□□□ 0.32
SQLE-201ENST00000265896 CDYLQ9Y232 598 aa17.04■□□□□ 0.32
SQLE-201ENST00000265896 E7ENX8 843 aa17.04■□□□□ 0.32
SQLE-201ENST00000265896 LRIG2O94898 1065 aa17.04■□□□□ 0.32
SQLE-201ENST00000265896 SMPD1P17405 629 aa17.04■□□□□ 0.32
SQLE-201ENST00000265896 GLUD2P49448 558 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms