RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 CLNKQ7Z7G1 428 aa5.78□□□□□ -1.48
VCAN-201ENST00000265077 NT5DC3Q86UY8 548 aa5.78□□□□□ -1.48
VCAN-201ENST00000265077 PQLC1Q8N2U9 271 aa5.78□□□□□ -1.48
VCAN-201ENST00000265077 TBC1D16Q8TBP0 767 aa5.78□□□□□ -1.48
VCAN-201ENST00000265077 RUSC1Q9BVN2 902 aa5.78□□□□□ -1.48
VCAN-201ENST00000265077 NUP50Q9UKX7 468 aa5.78□□□□□ -1.48
VCAN-201ENST00000265077 PIN4Q9Y237 131 aaKnown RBP5.78□□□□□ -1.48
VCAN-201ENST00000265077 TPRKBQ9Y3C4 175 aa5.78□□□□□ -1.48
VCAN-201ENST00000265077 TMEM221A6NGB7 291 aa5.78□□□□□ -1.48
VCAN-201ENST00000265077 TPST1O60507 370 aa5.78□□□□□ -1.48
VCAN-201ENST00000265077 PROCP04070 461 aa5.78□□□□□ -1.48
VCAN-201ENST00000265077 RIPPLY1Q0D2K3 151 aa5.78□□□□□ -1.48
VCAN-201ENST00000265077 SLC9A5Q14940 896 aa5.78□□□□□ -1.48
VCAN-201ENST00000265077 ZBED5Q49AG3 693 aa5.78□□□□□ -1.48
VCAN-201ENST00000265077 AGKQ53H12 422 aa5.78□□□□□ -1.48
VCAN-201ENST00000265077 LRRC17Q8N6Y2 441 aa5.78□□□□□ -1.48
VCAN-201ENST00000265077 ZC3H10Q96K80 434 aaKnown RBP5.78□□□□□ -1.48
VCAN-201ENST00000265077 SLITRK1Q96PX8 696 aa5.78□□□□□ -1.48
VCAN-201ENST00000265077 GPR63Q9BZJ6 419 aa5.78□□□□□ -1.48
VCAN-201ENST00000265077 FAM105AQ9NUU6 356 aa5.78□□□□□ -1.48
VCAN-201ENST00000265077 TMEM131LA2VDJ0 1609 aa5.78□□□□□ -1.48
VCAN-201ENST00000265077 POLEQ07864 2286 aa5.78□□□□□ -1.48
VCAN-201ENST00000265077 SEPHS1P49903 392 aa5.78□□□□□ -1.48
VCAN-201ENST00000265077 GRB10Q13322 594 aa5.78□□□□□ -1.48
VCAN-201ENST00000265077 AUHQ13825 339 aaKnown RBP5.78□□□□□ -1.48
VCAN-201ENST00000265077 FASTKQ14296 549 aaKnown RBP5.78□□□□□ -1.48
VCAN-201ENST00000265077 FOXR2Q6PJQ5 311 aa5.78□□□□□ -1.48
VCAN-201ENST00000265077 CYP4Z1Q86W10 505 aa5.78□□□□□ -1.48
VCAN-201ENST00000265077 RASAL3Q86YV0 1011 aa5.78□□□□□ -1.48
VCAN-201ENST00000265077 MMAAQ8IVH4 418 aaKnown RBP5.78□□□□□ -1.48
VCAN-201ENST00000265077 SPAG16Q8N0X2 631 aa5.78□□□□□ -1.48
VCAN-201ENST00000265077 LSM14AQ8ND56 463 aaKnown RBP5.78□□□□□ -1.48
VCAN-201ENST00000265077 AKAP1Q92667 903 aaKnown RBP eCLIP5.78□□□□□ -1.48
VCAN-201ENST00000265077 CPNE1Q99829 537 aa5.78□□□□□ -1.48
VCAN-201ENST00000265077 SEMA6AQ9H2E6 1030 aa5.78□□□□□ -1.48
VCAN-201ENST00000265077 WDCPQ9H6R7 721 aa5.78□□□□□ -1.48
VCAN-201ENST00000265077 ARMC1Q9NVT9 282 aa5.78□□□□□ -1.48
VCAN-201ENST00000265077 BGNP21810 368 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 DNAJB2P25686 324 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 SLC26A3P40879 764 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 FBXW4P57775 412 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 OR2B6P58173 313 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 SEMA3AQ14563 771 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 CRTC3Q6UUV7 619 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 SPOCD1Q6ZMY3 1216 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 TICAM1Q8IUC6 712 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 ZDHHC17Q8IUH5 632 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 OR6J1Q8NGC5 347 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 GPRASP2Q96D09 838 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 CAMKK2Q96RR4 588 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 MNTQ99583 582 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 TRMT13Q9NUP7 481 aaKnown RBP5.77□□□□□ -1.49
VCAN-201ENST00000265077 DPP3Q9NY33 737 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 POLRMTO00411 1230 aaKnown RBP5.77□□□□□ -1.49
VCAN-201ENST00000265077 PMPCBO75439 489 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 TM7SF2O76062 418 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 SGPL1O95470 568 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 CRTAMO95727 393 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 MLNP12872 115 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 CLCA4Q14CN2 919 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 KIZQ2M2Z5 673 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 ZNF772Q68DY9 489 aaPredicted RBP5.77□□□□□ -1.49
VCAN-201ENST00000265077 SHQ1Q6PI26 577 aaKnown RBP5.77□□□□□ -1.49
VCAN-201ENST00000265077 SLC47A2Q86VL8 602 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 MIER2Q8N344 545 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 PNPT1Q8TCS8 783 aaKnown RBP5.77□□□□□ -1.49
VCAN-201ENST00000265077 RETREG1Q9H6L5 497 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 ZFYVE28Q9HCC9 887 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 ADGRB1O14514 1584 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 HOXB8P17481 243 aaPredicted RBP5.77□□□□□ -1.49
VCAN-201ENST00000265077 ACSBG2Q5FVE4 666 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 PYHIN1Q6K0P9 492 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 CHST13Q8NET6 341 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 SYNDIG1Q9H7V2 258 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 KCNH7Q9NS40 1196 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 FAM49BQ9NUQ9 324 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 FAM237AA0A1B0GTK4 181 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 CLPXO76031 633 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 ITGA4P13612 1032 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 HOXB6P17509 224 aaKnown RBP5.77□□□□□ -1.49
VCAN-201ENST00000265077 NR4A1P22736 598 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 PPP3CCP48454 512 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 MAPK12P53778 367 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 PDK4Q16654 411 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 CLVS2Q5SYC1 327 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 LPCAT4Q643R3 524 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 KCTD10Q9H3F6 313 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 MKS1Q9NXB0 559 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 AXIN2Q9Y2T1 843 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 KCNE2Q9Y6J6 123 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 SALL3Q9BXA9 1300 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 TXNP10599 105 aaKnown RBP5.77□□□□□ -1.49
VCAN-201ENST00000265077 ODC1P11926 461 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 NPR3P17342 541 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 PTPN7P35236 360 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 ZNF135P52742 658 aaPredicted RBP5.77□□□□□ -1.49
VCAN-201ENST00000265077 PRKCQQ04759 706 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 CYP24A1Q07973 514 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 BLOC1S5Q8TDH9 187 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 FAM172AQ8WUF8 416 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms