RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 ITGB6P18564 788 aa16.94■□□□□ 0.3
PHRF1-201ENST00000264555 TKTP29401 623 aaKnown RBP16.94■□□□□ 0.3
PHRF1-201ENST00000264555 SOAT1P35610 550 aa16.94■□□□□ 0.3
PHRF1-201ENST00000264555 DDR2Q16832 855 aa16.94■□□□□ 0.3
PHRF1-201ENST00000264555 ANKRD22Q5VYY1 191 aa16.94■□□□□ 0.3
PHRF1-201ENST00000264555 ZDHHC24Q6UX98 284 aa16.94■□□□□ 0.3
PHRF1-201ENST00000264555 RIPOR1Q6ZS17 1223 aa16.94■□□□□ 0.3
PHRF1-201ENST00000264555 ZNF786Q8N393 782 aa16.94■□□□□ 0.3
PHRF1-201ENST00000264555 FNDC5Q8NAU1 212 aa16.94■□□□□ 0.3
PHRF1-201ENST00000264555 SFMBT1Q9UHJ3 866 aa16.94■□□□□ 0.3
PHRF1-201ENST00000264555 RAP2CQ9Y3L5 183 aa16.94■□□□□ 0.3
PHRF1-201ENST00000264555 SPTLC1O15269 473 aa16.94■□□□□ 0.3
PHRF1-201ENST00000264555 DUSP11O75319 330 aaKnown RBP16.94■□□□□ 0.3
PHRF1-201ENST00000264555 FGFR1P11362 822 aa16.94■□□□□ 0.3
PHRF1-201ENST00000264555 CRHR1P34998 444 aa16.94■□□□□ 0.3
PHRF1-201ENST00000264555 LILRA4P59901 499 aa16.94■□□□□ 0.3
PHRF1-201ENST00000264555 CYP51A1Q16850 503 aa16.94■□□□□ 0.3
PHRF1-201ENST00000264555 NKAPQ8N5F7 415 aaKnown RBP16.94■□□□□ 0.3
PHRF1-201ENST00000264555 NETO2Q8NC67 525 aa16.94■□□□□ 0.3
PHRF1-201ENST00000264555 ZCWPW1Q9H0M4 648 aa16.94■□□□□ 0.3
PHRF1-201ENST00000264555 SUFUQ9UMX1 484 aa16.94■□□□□ 0.3
PHRF1-201ENST00000264555 PLA2G4CQ9UP65 541 aa16.94■□□□□ 0.3
PHRF1-201ENST00000264555 BPGMP07738 259 aa16.94■□□□□ 0.3
PHRF1-201ENST00000264555 RAG1P15918 1043 aa16.94■□□□□ 0.3
PHRF1-201ENST00000264555 HALP42357 657 aa16.94■□□□□ 0.3
PHRF1-201ENST00000264555 FLT3LGP49771 235 aa16.94■□□□□ 0.3
PHRF1-201ENST00000264555 ARHGAP17Q68EM7 881 aa16.94■□□□□ 0.3
PHRF1-201ENST00000264555 GPSM1Q86YR5 675 aa16.94■□□□□ 0.3
PHRF1-201ENST00000264555 MCRS1Q96EZ8 462 aa16.94■□□□□ 0.3
PHRF1-201ENST00000264555 C2orf49Q9BVC5 232 aaPredicted RBP16.94■□□□□ 0.3
PHRF1-201ENST00000264555 DPEP3Q9H4B8 488 aa16.94■□□□□ 0.3
PHRF1-201ENST00000264555 SSU72Q9NP77 194 aaKnown RBP16.94■□□□□ 0.3
PHRF1-201ENST00000264555 PRIM2P49643 509 aa16.94■□□□□ 0.3
PHRF1-201ENST00000264555 INTS6LQ5JSJ4 861 aaKnown RBP16.94■□□□□ 0.3
PHRF1-201ENST00000264555 NET1Q7Z628 596 aaPredicted RBP16.94■□□□□ 0.3
PHRF1-201ENST00000264555 KCTD4Q8WVF5 259 aa16.94■□□□□ 0.3
PHRF1-201ENST00000264555 SH3GL3Q99963 347 aa16.94■□□□□ 0.3
PHRF1-201ENST00000264555 TMEM161AQ9NX61 479 aa16.94■□□□□ 0.3
PHRF1-201ENST00000264555 FBXO5Q9UKT4 447 aa16.94■□□□□ 0.3
PHRF1-201ENST00000264555 TRPM3Q9HCF6 1732 aaPredicted RBP16.93■□□□□ 0.3
PHRF1-201ENST00000264555 CSH1P0DML2 217 aa16.93■□□□□ 0.3
PHRF1-201ENST00000264555 CSH2P0DML3 217 aa16.93■□□□□ 0.3
PHRF1-201ENST00000264555 KLRC2P26717 231 aa16.93■□□□□ 0.3
PHRF1-201ENST00000264555 SAMD4BQ5PRF9 694 aaKnown RBP16.93■□□□□ 0.3
PHRF1-201ENST00000264555 TBCELQ5QJ74 424 aa16.93■□□□□ 0.3
PHRF1-201ENST00000264555 PPP1R15BQ5SWA1 713 aa16.93■□□□□ 0.3
PHRF1-201ENST00000264555 LIPMQ5VYY2 423 aa16.93■□□□□ 0.3
PHRF1-201ENST00000264555 AGAP11Q8TF27 550 aa16.93■□□□□ 0.3
PHRF1-201ENST00000264555 PANX3Q96QZ0 392 aa16.93■□□□□ 0.3
PHRF1-201ENST00000264555 DPY30Q9C005 99 aa16.93■□□□□ 0.3
PHRF1-201ENST00000264555 GLOD4Q9HC38 313 aa16.93■□□□□ 0.3
PHRF1-201ENST00000264555 RPL26L1Q9UNX3 145 aaKnown RBP16.93■□□□□ 0.3
PHRF1-201ENST00000264555 FAM50BQ9Y247 325 aa16.93■□□□□ 0.3
PHRF1-201ENST00000264555 HDAC3O15379 428 aa16.93■□□□□ 0.3
PHRF1-201ENST00000264555 TAF5Q15542 800 aa16.93■□□□□ 0.3
PHRF1-201ENST00000264555 HGH1Q9BTY7 390 aa16.93■□□□□ 0.3
PHRF1-201ENST00000264555 PARVBQ9HBI1 364 aa16.93■□□□□ 0.3
PHRF1-201ENST00000264555 ZNF180Q9UJW8 692 aa16.93■□□□□ 0.3
PHRF1-201ENST00000264555 CYP2A7P20853 494 aa16.93■□□□□ 0.3
PHRF1-201ENST00000264555 GPD2P43304 727 aa16.93■□□□□ 0.3
PHRF1-201ENST00000264555 PGS1Q32NB8 556 aa16.93■□□□□ 0.3
PHRF1-201ENST00000264555 SDHAF4Q5VUM1 108 aa16.93■□□□□ 0.3
PHRF1-201ENST00000264555 MILR1Q7Z6M3 343 aa16.93■□□□□ 0.3
PHRF1-201ENST00000264555 SLC27A5Q9Y2P5 690 aa16.93■□□□□ 0.3
PHRF1-201ENST00000264555 TNPO3Q9Y5L0 923 aaKnown RBP16.93■□□□□ 0.3
PHRF1-201ENST00000264555 PKD1L3Q7Z443 1732 aa16.93■□□□□ 0.3
PHRF1-201ENST00000264555 H3BMM5 538 aa16.93■□□□□ 0.3
PHRF1-201ENST00000264555 PSMD12O00232 456 aaPredicted RBP16.93■□□□□ 0.3
PHRF1-201ENST00000264555 KATNA1O75449 491 aa16.93■□□□□ 0.3
PHRF1-201ENST00000264555 OR56A5P0C7T3 313 aa16.93■□□□□ 0.3
PHRF1-201ENST00000264555 MSH3P20585 1137 aa16.93■□□□□ 0.3
PHRF1-201ENST00000264555 WARSP23381 471 aaKnown RBP16.93■□□□□ 0.3
PHRF1-201ENST00000264555 INSCQ1MX18 579 aa16.93■□□□□ 0.3
PHRF1-201ENST00000264555 C10orf107Q8IVU9 208 aa16.93■□□□□ 0.3
PHRF1-201ENST00000264555 OR6Y1Q8NGX8 325 aa16.93■□□□□ 0.3
PHRF1-201ENST00000264555 NDRG1Q92597 394 aaKnown RBP16.93■□□□□ 0.3
PHRF1-201ENST00000264555 BORCS6Q96GS4 357 aa16.93■□□□□ 0.3
PHRF1-201ENST00000264555 MECRQ9BV79 373 aa16.93■□□□□ 0.3
PHRF1-201ENST00000264555 ARHGEF4Q9NR80 690 aa16.93■□□□□ 0.3
PHRF1-201ENST00000264555 PADI3Q9ULW8 664 aa16.93■□□□□ 0.3
PHRF1-201ENST00000264555 DYRK1BQ9Y463 629 aa16.93■□□□□ 0.3
PHRF1-201ENST00000264555 SYNCRIPO60506 623 aaKnown RBP16.92■□□□□ 0.3
PHRF1-201ENST00000264555 FASP25445 335 aa16.92■□□□□ 0.3
PHRF1-201ENST00000264555 SLC1A5Q15758 541 aa16.92■□□□□ 0.3
PHRF1-201ENST00000264555 STXBP5Q5T5C0 1151 aa16.92■□□□□ 0.3
PHRF1-201ENST00000264555 VSTM1Q6UX27 236 aa16.92■□□□□ 0.3
PHRF1-201ENST00000264555 SPATA17Q96L03 361 aa16.92■□□□□ 0.3
PHRF1-201ENST00000264555 RAP1GDS1P52306 607 aa16.92■□□□□ 0.3
PHRF1-201ENST00000264555 WNT3AP56704 352 aa16.92■□□□□ 0.3
PHRF1-201ENST00000264555 IRX1P78414 480 aaPredicted RBP16.92■□□□□ 0.3
PHRF1-201ENST00000264555 CAMK2GQ13555 558 aaPredicted RBP16.92■□□□□ 0.3
PHRF1-201ENST00000264555 PFKFB4Q16877 469 aa16.92■□□□□ 0.3
PHRF1-201ENST00000264555 AFTPHQ6ULP2 937 aa16.92■□□□□ 0.3
PHRF1-201ENST00000264555 CPNE8Q86YQ8 564 aa16.92■□□□□ 0.3
PHRF1-201ENST00000264555 TNS4Q8IZW8 715 aa16.92■□□□□ 0.3
PHRF1-201ENST00000264555 DACH2Q96NX9 599 aa16.92■□□□□ 0.3
PHRF1-201ENST00000264555 CCDC154A6NI56 674 aa16.92■□□□□ 0.3
PHRF1-201ENST00000264555 SERPINA4P29622 427 aa16.92■□□□□ 0.3
PHRF1-201ENST00000264555 HTR7P34969 479 aa16.92■□□□□ 0.3
PHRF1-201ENST00000264555 NAA20P61599 178 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms