RNA–Protein interactions for RNA: ENST00000263202.14

UFD1-201, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFD1, Length 1,814 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-201ENST00000263202 SLC12A1Q13621 1099 aa23.08■■□□□ 1.29
UFD1-201ENST00000263202 CASP8Q14790 479 aa23.08■■□□□ 1.29
UFD1-201ENST00000263202 SLMAPQ14BN4 828 aa23.08■■□□□ 1.29
UFD1-201ENST00000263202 ASTLQ6HA08 431 aaPredicted RBP23.08■■□□□ 1.29
UFD1-201ENST00000263202 MFSD6LQ8IWD5 586 aa23.08■■□□□ 1.29
UFD1-201ENST00000263202 KLHDC8BQ8IXV7 354 aa23.08■■□□□ 1.29
UFD1-201ENST00000263202 PGBD5Q8N414 524 aa23.08■■□□□ 1.29
UFD1-201ENST00000263202 MCUQ8NE86 351 aa23.08■■□□□ 1.29
UFD1-201ENST00000263202 RBM15Q96T37 977 aaKnown RBP eCLIP23.08■■□□□ 1.292e-6■□□□□ 8.9
UFD1-201ENST00000263202 FAM83CQ9BQN1 747 aa23.08■■□□□ 1.29
UFD1-201ENST00000263202 MLPHQ9BV36 600 aaPredicted RBP23.08■■□□□ 1.29
UFD1-201ENST00000263202 PLA2G2FQ9BZM2 168 aa23.08■■□□□ 1.29
UFD1-201ENST00000263202 ABCB8Q9NUT2 735 aa23.08■■□□□ 1.29
UFD1-201ENST00000263202 VPS51Q9UID3 782 aa23.08■■□□□ 1.29
UFD1-201ENST00000263202 INTS6Q9UL03 887 aaKnown RBP23.08■■□□□ 1.29
UFD1-201ENST00000263202 CD160O95971 181 aa23.08■■□□□ 1.28
UFD1-201ENST00000263202 ARSAP15289 507 aa23.08■■□□□ 1.28
UFD1-201ENST00000263202 FCHO2Q0JRZ9 810 aa23.08■■□□□ 1.28
UFD1-201ENST00000263202 RFTN1Q14699 578 aaPredicted RBP23.08■■□□□ 1.28
UFD1-201ENST00000263202 HIF1AQ16665 826 aa23.08■■□□□ 1.28
UFD1-201ENST00000263202 PLEKHG6Q3KR16 790 aa23.08■■□□□ 1.28
UFD1-201ENST00000263202 FNBP1LQ5T0N5 605 aa23.08■■□□□ 1.28
UFD1-201ENST00000263202 KCTD11Q693B1 232 aa23.08■■□□□ 1.28
UFD1-201ENST00000263202 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP23.08■■□□□ 1.282e-10■■■■■ 35.6
UFD1-201ENST00000263202 ZNF557Q8N988 423 aaPredicted RBP23.08■■□□□ 1.28
UFD1-201ENST00000263202 ELSPBP1Q96BH3 223 aa23.08■■□□□ 1.28
UFD1-201ENST00000263202 OXNAD1Q96HP4 312 aaPredicted RBP23.08■■□□□ 1.28
UFD1-201ENST00000263202 H3BQ06 376 aaPredicted RBP23.07■■□□□ 1.28
UFD1-201ENST00000263202 ADH5P11766 374 aa23.07■■□□□ 1.28
UFD1-201ENST00000263202 ARL4CP56559 192 aa23.07■■□□□ 1.28
UFD1-201ENST00000263202 MAXP61244 160 aa23.07■■□□□ 1.28
UFD1-201ENST00000263202 PRPSAP1Q14558 356 aa23.07■■□□□ 1.28
UFD1-201ENST00000263202 PARM1Q6UWI2 310 aa23.07■■□□□ 1.28
UFD1-201ENST00000263202 PPP1R21Q6ZMI0 780 aa23.07■■□□□ 1.28
UFD1-201ENST00000263202 ZNF534Q76KX8 674 aa23.07■■□□□ 1.28
UFD1-201ENST00000263202 HDXQ7Z353 690 aa23.07■■□□□ 1.28
UFD1-201ENST00000263202 SPATA22Q8NHS9 363 aa23.07■■□□□ 1.28
UFD1-201ENST00000263202 MYLIPQ8WY64 445 aa23.07■■□□□ 1.28
UFD1-201ENST00000263202 ATP2A3Q93084 1043 aa23.07■■□□□ 1.28
UFD1-201ENST00000263202 SERPINB12Q96P63 405 aa23.07■■□□□ 1.28
UFD1-201ENST00000263202 C2orf49Q9BVC5 232 aaPredicted RBP23.07■■□□□ 1.28
UFD1-201ENST00000263202 SLC2A11Q9BYW1 496 aa23.07■■□□□ 1.28
UFD1-201ENST00000263202 FRMD8Q9BZ67 464 aaPredicted RBP23.07■■□□□ 1.28
UFD1-201ENST00000263202 EBF3Q9H4W6 596 aa23.07■■□□□ 1.28
UFD1-201ENST00000263202 HOXC11O43248 304 aaPredicted RBP23.06■■□□□ 1.28
UFD1-201ENST00000263202 NFATC1O95644 943 aa23.06■■□□□ 1.28
UFD1-201ENST00000263202 AP2A1O95782 977 aa23.06■■□□□ 1.28
UFD1-201ENST00000263202 ADH1CP00326 375 aa23.06■■□□□ 1.28
UFD1-201ENST00000263202 PMS2P54278 862 aa23.06■■□□□ 1.28
UFD1-201ENST00000263202 ZNF235Q14590 738 aa23.06■■□□□ 1.28
UFD1-201ENST00000263202 PDGFRLQ15198 375 aa23.06■■□□□ 1.28
UFD1-201ENST00000263202 LINGO4Q6UY18 593 aa23.06■■□□□ 1.28
UFD1-201ENST00000263202 CEP128Q6ZU80 1094 aa23.06■■□□□ 1.28
UFD1-201ENST00000263202 CENPUQ71F23 418 aa23.06■■□□□ 1.28
UFD1-201ENST00000263202 CAND1Q86VP6 1230 aaKnown RBP23.06■■□□□ 1.28
UFD1-201ENST00000263202 RELL1Q8IUW5 271 aa23.06■■□□□ 1.28
UFD1-201ENST00000263202 FGF14Q92915 247 aa23.06■■□□□ 1.28
UFD1-201ENST00000263202 ACDQ96AP0 544 aa23.06■■□□□ 1.28
UFD1-201ENST00000263202 KXD1Q9BQD3 176 aa23.06■■□□□ 1.28
UFD1-201ENST00000263202 PHACTR1Q9C0D0 580 aa23.06■■□□□ 1.28
UFD1-201ENST00000263202 SLC25A51Q9H1U9 297 aa23.06■■□□□ 1.28
UFD1-201ENST00000263202 UBP1Q9NZI7 540 aa23.06■■□□□ 1.28
UFD1-201ENST00000263202 SEPT3Q9UH03 358 aa23.06■■□□□ 1.28
UFD1-201ENST00000263202 COL4A3Q01955 1670 aa23.06■■□□□ 1.28
UFD1-201ENST00000263202 MIA3Q5JRA6 1907 aa23.06■■□□□ 1.28
UFD1-201ENST00000263202 ERI2A8K979 691 aaKnown RBP23.05■■□□□ 1.28
UFD1-201ENST00000263202 MUSKO15146 869 aa23.05■■□□□ 1.28
UFD1-201ENST00000263202 GRIA1P42261 906 aa23.05■■□□□ 1.28
UFD1-201ENST00000263202 ITKQ08881 620 aa23.05■■□□□ 1.28
UFD1-201ENST00000263202 CYTH1Q15438 398 aa23.05■■□□□ 1.28
UFD1-201ENST00000263202 UAP1Q16222 522 aaPredicted RBP23.05■■□□□ 1.28
UFD1-201ENST00000263202 MSS51Q4VC12 460 aa23.05■■□□□ 1.28
UFD1-201ENST00000263202 PITRM1Q5JRX3 1037 aa23.05■■□□□ 1.28
UFD1-201ENST00000263202 PDIK1LQ8N165 341 aa23.05■■□□□ 1.28
UFD1-201ENST00000263202 BBS5Q8N3I7 341 aa23.05■■□□□ 1.28
UFD1-201ENST00000263202 NAT16Q8N8M0 369 aa23.05■■□□□ 1.28
UFD1-201ENST00000263202 IMP4Q96G21 291 aaKnown RBP23.05■■□□□ 1.28
UFD1-201ENST00000263202 SAYSD1Q9NPB0 183 aa23.05■■□□□ 1.28
UFD1-201ENST00000263202 GGA2Q9UJY4 613 aa23.05■■□□□ 1.28
UFD1-201ENST00000263202 FBXO10Q9UK96 956 aa23.05■■□□□ 1.28
UFD1-201ENST00000263202 AAR2Q9Y312 384 aaKnown RBP23.05■■□□□ 1.28
UFD1-201ENST00000263202 BRWD1Q9NSI6 2320 aa23.05■■□□□ 1.28
UFD1-201ENST00000263202 E7ESA3 106 aa23.05■■□□□ 1.28
UFD1-201ENST00000263202 ANXA9O76027 345 aa23.05■■□□□ 1.28
UFD1-201ENST00000263202 SUN1O94901 812 aa23.05■■□□□ 1.28
UFD1-201ENST00000263202 MT-CYBP00156 380 aaPredicted RBP23.05■■□□□ 1.28
UFD1-201ENST00000263202 HSD17B3P37058 310 aa23.05■■□□□ 1.28
UFD1-201ENST00000263202 NIPAL4Q0D2K0 466 aa23.05■■□□□ 1.28
UFD1-201ENST00000263202 CBLBQ13191 982 aa23.05■■□□□ 1.28
UFD1-201ENST00000263202 CCDC85BQ15834 202 aaPredicted RBP23.05■■□□□ 1.28
UFD1-201ENST00000263202 FUT11Q495W5 492 aa23.05■■□□□ 1.28
UFD1-201ENST00000263202 Q7L0L9 218 aa23.05■■□□□ 1.28
UFD1-201ENST00000263202 PPP1R2P1Q96PQ5 205 aa23.05■■□□□ 1.28
UFD1-201ENST00000263202 PSKH2Q96QS6 385 aa23.05■■□□□ 1.28
UFD1-201ENST00000263202 CDX2Q99626 313 aaPredicted RBP23.05■■□□□ 1.28
UFD1-201ENST00000263202 CINPQ9BW66 212 aaPredicted RBP23.05■■□□□ 1.28
UFD1-201ENST00000263202 POLR1EQ9GZS1 481 aaKnown RBP23.05■■□□□ 1.28
UFD1-201ENST00000263202 CDC42EP4Q9H3Q1 356 aaKnown RBP23.05■■□□□ 1.28
UFD1-201ENST00000263202 SEMA4AQ9H3S1 761 aa23.05■■□□□ 1.28
UFD1-201ENST00000263202 HPS4Q9NQG7 708 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms