RNA–Protein interactions for RNA: ENST00000262640.11

VAMP7-201, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-201ENST00000262640 ITFG1Q8TB96 612 aa13.24□□□□□ -0.29
VAMP7-201ENST00000262640 ZSWIM3Q96MP5 696 aa13.24□□□□□ -0.29
VAMP7-201ENST00000262640 IGFLR1Q9H665 355 aa13.24□□□□□ -0.29
VAMP7-201ENST00000262640 KIF9Q9HAQ2 790 aa13.24□□□□□ -0.29
VAMP7-201ENST00000262640 CASS4Q9NQ75 786 aa13.24□□□□□ -0.29
VAMP7-201ENST00000262640 UBA2Q9UBT2 640 aaPredicted RBP13.24□□□□□ -0.29
VAMP7-201ENST00000262640 NOTCH4Q99466 2003 aa13.24□□□□□ -0.29
VAMP7-201ENST00000262640 HMGB1P1B2RPK0 211 aaPredicted RBP13.23□□□□□ -0.29
VAMP7-201ENST00000262640 ZNF235Q14590 738 aa13.23□□□□□ -0.29
VAMP7-201ENST00000262640 TTMPQ5BVD1 217 aa13.23□□□□□ -0.29
VAMP7-201ENST00000262640 RARS2Q5T160 578 aaKnown RBP13.23□□□□□ -0.29
VAMP7-201ENST00000262640 CAPN12Q6ZSI9 719 aa13.23□□□□□ -0.29
VAMP7-201ENST00000262640 C3orf62Q6ZUJ4 267 aa13.23□□□□□ -0.29
VAMP7-201ENST00000262640 ARID3BQ8IVW6 561 aaPredicted RBP13.23□□□□□ -0.29
VAMP7-201ENST00000262640 SPATA22Q8NHS9 363 aa13.23□□□□□ -0.29
VAMP7-201ENST00000262640 IMP4Q96G21 291 aaKnown RBP13.23□□□□□ -0.29
VAMP7-201ENST00000262640 ATP6V1G3Q96LB4 118 aa13.23□□□□□ -0.29
VAMP7-201ENST00000262640 EBNA1BP2Q99848 306 aaKnown RBP13.23□□□□□ -0.29
VAMP7-201ENST00000262640 CENPHQ9H3R5 247 aa13.23□□□□□ -0.29
VAMP7-201ENST00000262640 PPCSQ9HAB8 311 aa13.23□□□□□ -0.29
VAMP7-201ENST00000262640 ZC3H7BQ9UGR2 993 aaKnown RBP13.23□□□□□ -0.29
VAMP7-201ENST00000262640 SSTR1P30872 391 aa13.23□□□□□ -0.29
VAMP7-201ENST00000262640 MPP3Q13368 585 aa13.23□□□□□ -0.29
VAMP7-201ENST00000262640 FSCBQ5H9T9 825 aa13.23□□□□□ -0.29
VAMP7-201ENST00000262640 CCNJLQ8IV13 435 aa13.23□□□□□ -0.29
VAMP7-201ENST00000262640 EFHBQ8N7U6 833 aa13.23□□□□□ -0.29
VAMP7-201ENST00000262640 KIAA1958Q8N8K9 716 aa13.23□□□□□ -0.29
VAMP7-201ENST00000262640 OR52K1Q8NGK4 314 aa13.23□□□□□ -0.29
VAMP7-201ENST00000262640 EPS8L3Q8TE67 593 aaKnown RBP13.23□□□□□ -0.29
VAMP7-201ENST00000262640 OTUB2Q96DC9 234 aa13.23□□□□□ -0.29
VAMP7-201ENST00000262640 PGM2Q96G03 612 aa13.23□□□□□ -0.29
VAMP7-201ENST00000262640 CFAP36Q96G28 342 aa13.23□□□□□ -0.29
VAMP7-201ENST00000262640 TBL1YQ9BQ87 522 aa13.23□□□□□ -0.29
VAMP7-201ENST00000262640 POLR1EQ9GZS1 481 aaKnown RBP13.23□□□□□ -0.29
VAMP7-201ENST00000262640 VPS45Q9NRW7 570 aa13.23□□□□□ -0.29
VAMP7-201ENST00000262640 UBP1Q9NZI7 540 aa13.23□□□□□ -0.29
VAMP7-201ENST00000262640 SEPT3Q9UH03 358 aa13.23□□□□□ -0.29
VAMP7-201ENST00000262640 MAD1L1Q9Y6D9 718 aa13.23□□□□□ -0.29
VAMP7-201ENST00000262640 EXOC1LA0A1B0GW35 172 aa13.22□□□□□ -0.29
VAMP7-201ENST00000262640 TLDC2A0PJX2 215 aa13.22□□□□□ -0.29
VAMP7-201ENST00000262640 SESN2P58004 480 aaPredicted RBP13.22□□□□□ -0.29
VAMP7-201ENST00000262640 ITKQ08881 620 aa13.22□□□□□ -0.29
VAMP7-201ENST00000262640 HYAL1Q12794 435 aa13.22□□□□□ -0.29
VAMP7-201ENST00000262640 LEKR1Q6ZMV7 388 aa13.22□□□□□ -0.29
VAMP7-201ENST00000262640 TPGS1Q6ZTW0 290 aa13.22□□□□□ -0.29
VAMP7-201ENST00000262640 GPR149Q86SP6 731 aa13.22□□□□□ -0.29
VAMP7-201ENST00000262640 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.22□□□□□ -0.29
VAMP7-201ENST00000262640 CELF5Q8N6W0 485 aaKnown RBP13.22□□□□□ -0.29
VAMP7-201ENST00000262640 DNAAF3Q8N9W5 541 aa13.22□□□□□ -0.29
VAMP7-201ENST00000262640 RIN3Q8TB24 985 aa13.22□□□□□ -0.29
VAMP7-201ENST00000262640 STAMBPL1Q96FJ0 436 aa13.22□□□□□ -0.29
VAMP7-201ENST00000262640 FEM1AQ9BSK4 669 aa13.22□□□□□ -0.29
VAMP7-201ENST00000262640 NAT9Q9BTE0 207 aa13.22□□□□□ -0.29
VAMP7-201ENST00000262640 VPS28Q9UK41 221 aa13.22□□□□□ -0.29
VAMP7-201ENST00000262640 OR51B4Q9Y5P0 310 aa13.22□□□□□ -0.29
VAMP7-201ENST00000262640 CHD5Q8TDI0 1954 aa13.22□□□□□ -0.29
VAMP7-201ENST00000262640 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.22□□□□□ -0.29
VAMP7-201ENST00000262640 SMIM23A6NLE4 172 aa13.22□□□□□ -0.29
VAMP7-201ENST00000262640 CBX4O00257 560 aa13.22□□□□□ -0.29
VAMP7-201ENST00000262640 SLC9A3R1O14745 358 aaPredicted RBP13.22□□□□□ -0.29
VAMP7-201ENST00000262640 USP12O75317 370 aa13.22□□□□□ -0.29
VAMP7-201ENST00000262640 MT-CYBP00156 380 aaPredicted RBP13.22□□□□□ -0.29
VAMP7-201ENST00000262640 FSHRP23945 695 aa13.22□□□□□ -0.29
VAMP7-201ENST00000262640 MGAT1P26572 445 aa13.22□□□□□ -0.29
VAMP7-201ENST00000262640 CSKP41240 450 aa13.22□□□□□ -0.29
VAMP7-201ENST00000262640 NPY2RP49146 381 aa13.22□□□□□ -0.29
VAMP7-201ENST00000262640 CDH17Q12864 832 aa13.22□□□□□ -0.29
VAMP7-201ENST00000262640 CBX2Q14781 532 aaPredicted RBP13.22□□□□□ -0.29
VAMP7-201ENST00000262640 LONRF1Q17RB8 773 aa13.22□□□□□ -0.29
VAMP7-201ENST00000262640 KLHL38Q2WGJ6 581 aa13.22□□□□□ -0.29
VAMP7-201ENST00000262640 TCEAL5Q5H9L2 206 aa13.22□□□□□ -0.29
VAMP7-201ENST00000262640 MPP5Q8N3R9 675 aa13.22□□□□□ -0.29
VAMP7-201ENST00000262640 PGBD5Q8N414 524 aa13.22□□□□□ -0.29
VAMP7-201ENST00000262640 DCAF4L2Q8NA75 395 aa13.22□□□□□ -0.29
VAMP7-201ENST00000262640 FIBINQ8TAL6 211 aa13.22□□□□□ -0.29
VAMP7-201ENST00000262640 BHMTQ93088 406 aa13.22□□□□□ -0.29
VAMP7-201ENST00000262640 STMN4Q9H169 189 aaPredicted RBP13.22□□□□□ -0.29
VAMP7-201ENST00000262640 ACSS3Q9H6R3 686 aa13.22□□□□□ -0.29
VAMP7-201ENST00000262640 BFARQ9NZS9 450 aa13.22□□□□□ -0.29
VAMP7-201ENST00000262640 FETUBQ9UGM5 382 aa13.22□□□□□ -0.29
VAMP7-201ENST00000262640 RABGEF1Q9UJ41 708 aa13.22□□□□□ -0.29
VAMP7-201ENST00000262640 RGS16O15492 202 aaPredicted RBP13.21□□□□□ -0.29
VAMP7-201ENST00000262640 GLP2RO95838 553 aa13.21□□□□□ -0.29
VAMP7-201ENST00000262640 GLDCP23378 1020 aa13.21□□□□□ -0.29
VAMP7-201ENST00000262640 MZF1P28698 734 aaPredicted RBP13.21□□□□□ -0.29
VAMP7-201ENST00000262640 STX2P32856 288 aa13.21□□□□□ -0.29
VAMP7-201ENST00000262640 ADRA1AP35348 466 aa13.21□□□□□ -0.29
VAMP7-201ENST00000262640 MAXP61244 160 aa13.21□□□□□ -0.29
VAMP7-201ENST00000262640 NIPAL4Q0D2K0 466 aa13.21□□□□□ -0.29
VAMP7-201ENST00000262640 OLIG2Q13516 323 aa13.21□□□□□ -0.29
VAMP7-201ENST00000262640 FYB2Q5VWT5 728 aa13.21□□□□□ -0.29
VAMP7-201ENST00000262640 ALG1LQ6GMV1 187 aa13.21□□□□□ -0.29
VAMP7-201ENST00000262640 ANKRD54Q6NXT1 300 aa13.21□□□□□ -0.29
VAMP7-201ENST00000262640 POTEHQ6S545 545 aa13.21□□□□□ -0.29
VAMP7-201ENST00000262640 KDELC1Q6UW63 502 aa13.21□□□□□ -0.29
VAMP7-201ENST00000262640 PRPF39Q86UA1 669 aaKnown RBP13.21□□□□□ -0.29
VAMP7-201ENST00000262640 RIBC1Q8N443 379 aaPredicted RBP13.21□□□□□ -0.29
VAMP7-201ENST00000262640 IPMKQ8NFU5 416 aa13.21□□□□□ -0.29
VAMP7-201ENST00000262640 WFDC5Q8TCV5 224 aa13.21□□□□□ -0.29
VAMP7-201ENST00000262640 FBF1Q8TES7 1133 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms