RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 HFE2Q6ZVN8 426 aa17.73■□□□□ 0.43
TRAM1-201ENST00000262213 RPS27LQ71UM5 84 aaKnown RBP17.73■□□□□ 0.43
TRAM1-201ENST00000262213 STRADAQ7RTN6 431 aa17.73■□□□□ 0.43
TRAM1-201ENST00000262213 PIGZQ86VD9 579 aa17.73■□□□□ 0.43
TRAM1-201ENST00000262213 ZNF410Q86VK4 478 aa17.73■□□□□ 0.43
TRAM1-201ENST00000262213 LSMEM2Q8N112 164 aa17.73■□□□□ 0.43
TRAM1-201ENST00000262213 SNRNP27Q8WVK2 155 aaKnown RBP17.73■□□□□ 0.43
TRAM1-201ENST00000262213 MLPHQ9BV36 600 aaPredicted RBP17.73■□□□□ 0.43
TRAM1-201ENST00000262213 KLK14Q9P0G3 267 aa17.73■□□□□ 0.43
TRAM1-201ENST00000262213 TCAF2A6NFQ2 919 aa17.72■□□□□ 0.43
TRAM1-201ENST00000262213 DLX3O60479 287 aa17.72■□□□□ 0.43
TRAM1-201ENST00000262213 MT-CO1P00395 513 aa17.72■□□□□ 0.43
TRAM1-201ENST00000262213 CTBP1Q13363 440 aa17.72■□□□□ 0.43
TRAM1-201ENST00000262213 ANO4Q32M45 955 aa17.72■□□□□ 0.43
TRAM1-201ENST00000262213 TSPAN14Q8NG11 270 aa17.72■□□□□ 0.43
TRAM1-201ENST00000262213 ISL2Q96A47 359 aa17.72■□□□□ 0.43
TRAM1-201ENST00000262213 SNX25Q9H3E2 840 aa17.72■□□□□ 0.43
TRAM1-201ENST00000262213 PIGVQ9NUD9 493 aa17.72■□□□□ 0.43
TRAM1-201ENST00000262213 SETD4Q9NVD3 440 aa17.72■□□□□ 0.43
TRAM1-201ENST00000262213 DNAAF2Q9NVR5 837 aaKnown RBP17.72■□□□□ 0.43
TRAM1-201ENST00000262213 EPS15L1Q9UBC2 864 aa17.72■□□□□ 0.43
TRAM1-201ENST00000262213 RNF11Q9Y3C5 154 aa17.72■□□□□ 0.43
TRAM1-201ENST00000262213 ARHGEF37A1IGU5 675 aa17.72■□□□□ 0.43
TRAM1-201ENST00000262213 ACOT8O14734 319 aa17.72■□□□□ 0.43
TRAM1-201ENST00000262213 MAGEB3O15480 346 aa17.72■□□□□ 0.43
TRAM1-201ENST00000262213 H2AFYO75367 372 aaKnown RBP17.72■□□□□ 0.43
TRAM1-201ENST00000262213 TRMUO75648 421 aaKnown RBP17.72■□□□□ 0.43
TRAM1-201ENST00000262213 AKAP5P24588 427 aa17.72■□□□□ 0.43
TRAM1-201ENST00000262213 NR1H2P55055 460 aa17.72■□□□□ 0.43
TRAM1-201ENST00000262213 ZBTB17Q13105 803 aa17.72■□□□□ 0.43
TRAM1-201ENST00000262213 APOFQ13790 326 aa17.72■□□□□ 0.43
TRAM1-201ENST00000262213 FAM187BQ17R55 369 aa17.72■□□□□ 0.43
TRAM1-201ENST00000262213 OTUD1Q5VV17 481 aaPredicted RBP17.72■□□□□ 0.43
TRAM1-201ENST00000262213 CTU1Q7Z7A3 348 aaKnown RBP17.72■□□□□ 0.43
TRAM1-201ENST00000262213 SLC16A10Q8TF71 515 aa17.72■□□□□ 0.43
TRAM1-201ENST00000262213 NXNL1Q96CM4 212 aa17.72■□□□□ 0.43
TRAM1-201ENST00000262213 EIF2AQ9BY44 585 aaKnown RBP17.72■□□□□ 0.43
TRAM1-201ENST00000262213 GOLGA2P5Q9HBQ8 144 aa17.72■□□□□ 0.43
TRAM1-201ENST00000262213 GJD2Q9UKL4 321 aa17.72■□□□□ 0.43
TRAM1-201ENST00000262213 NEMP2A6NFY4 417 aa17.71■□□□□ 0.43
TRAM1-201ENST00000262213 E7ENX8 843 aa17.71■□□□□ 0.43
TRAM1-201ENST00000262213 CDH15P55291 814 aa17.71■□□□□ 0.43
TRAM1-201ENST00000262213 PSME3P61289 254 aa17.71■□□□□ 0.43
TRAM1-201ENST00000262213 MPP1Q00013 466 aa17.71■□□□□ 0.43
TRAM1-201ENST00000262213 SETD3Q86TU7 594 aaPredicted RBP17.71■□□□□ 0.43
TRAM1-201ENST00000262213 DENND6AQ8IWF6 608 aa17.71■□□□□ 0.43
TRAM1-201ENST00000262213 TMEM151AQ8N4L1 468 aa17.71■□□□□ 0.43
TRAM1-201ENST00000262213 SLC7A14Q8TBB6 771 aa17.71■□□□□ 0.43
TRAM1-201ENST00000262213 TRPM4Q8TD43 1214 aa17.71■□□□□ 0.43
TRAM1-201ENST00000262213 AFG1LQ8WV93 481 aa17.71■□□□□ 0.43
TRAM1-201ENST00000262213 CIB1Q99828 191 aa17.71■□□□□ 0.43
TRAM1-201ENST00000262213 TMEM79Q9BSE2 394 aa17.71■□□□□ 0.43
TRAM1-201ENST00000262213 CYP4F12Q9HCS2 524 aa17.71■□□□□ 0.43
TRAM1-201ENST00000262213 AP4S1Q9Y587 144 aa17.71■□□□□ 0.43
TRAM1-201ENST00000262213 SSC5DA1L4H1 1573 aa17.71■□□□□ 0.43
TRAM1-201ENST00000262213 CROCCQ5TZA2 2017 aa17.71■□□□□ 0.43
TRAM1-201ENST00000262213 A0A0J9YVX5 310 aa17.71■□□□□ 0.43
TRAM1-201ENST00000262213 BEST1O76090 585 aa17.71■□□□□ 0.43
TRAM1-201ENST00000262213 DDHD2O94830 711 aa17.71■□□□□ 0.43
TRAM1-201ENST00000262213 CD68P34810 354 aaPredicted RBP17.71■□□□□ 0.43
TRAM1-201ENST00000262213 ARHGAP17Q68EM7 881 aa17.71■□□□□ 0.43
TRAM1-201ENST00000262213 ZNF280DQ6N043 979 aa17.71■□□□□ 0.43
TRAM1-201ENST00000262213 RNF135Q8IUD6 432 aa17.71■□□□□ 0.43
TRAM1-201ENST00000262213 NPWQ8N729 165 aa17.71■□□□□ 0.43
TRAM1-201ENST00000262213 RNF169Q8NCN4 708 aa17.71■□□□□ 0.43
TRAM1-201ENST00000262213 DDI1Q8WTU0 396 aa17.71■□□□□ 0.43
TRAM1-201ENST00000262213 PPWD1Q96BP3 646 aaKnown RBP17.71■□□□□ 0.43
TRAM1-201ENST00000262213 TRPC7Q9HCX4 862 aa17.71■□□□□ 0.43
TRAM1-201ENST00000262213 ANLNQ9NQW6 1124 aa17.71■□□□□ 0.43
TRAM1-201ENST00000262213 CEPT1Q9Y6K0 416 aa17.71■□□□□ 0.43
TRAM1-201ENST00000262213 SLC35E2BP0CK96 405 aa17.7■□□□□ 0.42
TRAM1-201ENST00000262213 CYP2C8P10632 490 aa17.7■□□□□ 0.42
TRAM1-201ENST00000262213 EPHX2P34913 555 aa17.7■□□□□ 0.42
TRAM1-201ENST00000262213 ADARP55265 1226 aaKnown RBP17.7■□□□□ 0.42
TRAM1-201ENST00000262213 PRAMEP78395 509 aa17.7■□□□□ 0.42
TRAM1-201ENST00000262213 PPIDQ08752 370 aaKnown RBP17.7■□□□□ 0.42
TRAM1-201ENST00000262213 NSUN2Q08J23 767 aaKnown RBP eCLIP17.7■□□□□ 0.42
TRAM1-201ENST00000262213 MTX3Q5HYI7 312 aa17.7■□□□□ 0.42
TRAM1-201ENST00000262213 KRT80Q6KB66 452 aa17.7■□□□□ 0.42
TRAM1-201ENST00000262213 LRRC8EQ6NSJ5 796 aa17.7■□□□□ 0.42
TRAM1-201ENST00000262213 KDELC2Q7Z4H8 507 aa17.7■□□□□ 0.42
TRAM1-201ENST00000262213 ZC3HC1Q86WB0 502 aaKnown RBP17.7■□□□□ 0.42
TRAM1-201ENST00000262213 CELF6Q96J87 481 aaKnown RBP17.7■□□□□ 0.42
TRAM1-201ENST00000262213 C1QTNF1Q9BXJ1 281 aa17.7■□□□□ 0.42
TRAM1-201ENST00000262213 CASS4Q9NQ75 786 aa17.7■□□□□ 0.42
TRAM1-201ENST00000262213 PLK2Q9NYY3 685 aa17.7■□□□□ 0.42
TRAM1-201ENST00000262213 GMPR2Q9P2T1 348 aaKnown RBP17.7■□□□□ 0.42
TRAM1-201ENST00000262213 GTF2IRD1Q9UHL9 959 aa17.7■□□□□ 0.42
TRAM1-201ENST00000262213 MID2Q9UJV3 735 aa17.7■□□□□ 0.42
TRAM1-201ENST00000262213 TRIM38O00635 465 aa17.7■□□□□ 0.42
TRAM1-201ENST00000262213 SPTLC1O15269 473 aa17.7■□□□□ 0.42
TRAM1-201ENST00000262213 CABYRO75952 493 aa17.7■□□□□ 0.42
TRAM1-201ENST00000262213 STAU1O95793 577 aaKnown RBP17.7■□□□□ 0.42
TRAM1-201ENST00000262213 LGALS2P05162 132 aa17.7■□□□□ 0.42
TRAM1-201ENST00000262213 ZNF26P17031 533 aaPredicted RBP17.7■□□□□ 0.42
TRAM1-201ENST00000262213 CDH2P19022 906 aaPredicted RBP17.7■□□□□ 0.42
TRAM1-201ENST00000262213 TPI1P60174 286 aa17.7■□□□□ 0.42
TRAM1-201ENST00000262213 VGLL4Q14135 290 aa17.7■□□□□ 0.42
TRAM1-201ENST00000262213 IL31Q6EBC2 164 aa17.7■□□□□ 0.42
TRAM1-201ENST00000262213 KLC3Q6P597 504 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms