RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 C8orf74Q6P047 294 aa28.02■■■□□ 2.08
SMARCD3-201ENST00000262188 XPO6Q96QU8 1125 aaKnown RBP28.02■■■□□ 2.08
SMARCD3-201ENST00000262188 FBRSL1Q9HCM7 1045 aaKnown RBP28.02■■■□□ 2.08
SMARCD3-201ENST00000262188 FBXO10Q9UK96 956 aa28.02■■■□□ 2.08
SMARCD3-201ENST00000262188 HACD1B0YJ81 288 aa28.02■■■□□ 2.08
SMARCD3-201ENST00000262188 RNF103O00237 685 aa28.02■■■□□ 2.08
SMARCD3-201ENST00000262188 EBAG9O00559 213 aa28.02■■■□□ 2.08
SMARCD3-201ENST00000262188 SHOX2O60902 331 aaPredicted RBP28.02■■■□□ 2.08
SMARCD3-201ENST00000262188 MT-CO1P00395 513 aa28.02■■■□□ 2.08
SMARCD3-201ENST00000262188 JAMLQ86YT9 394 aa28.02■■■□□ 2.08
SMARCD3-201ENST00000262188 TSGA13Q96PP4 275 aa28.02■■■□□ 2.08
SMARCD3-201ENST00000262188 PDFQ9HBH1 243 aa28.02■■■□□ 2.08
SMARCD3-201ENST00000262188 KDELR3O43731 214 aa28.01■■■□□ 2.07
SMARCD3-201ENST00000262188 PRAMEF11O60813 436 aa28.01■■■□□ 2.07
SMARCD3-201ENST00000262188 ZMPSTE24O75844 475 aa28.01■■■□□ 2.07
SMARCD3-201ENST00000262188 ECEL1O95672 775 aa28.01■■■□□ 2.07
SMARCD3-201ENST00000262188 JCHAINP01591 159 aa28.01■■■□□ 2.07
SMARCD3-201ENST00000262188 CCNCP24863 283 aa28.01■■■□□ 2.07
SMARCD3-201ENST00000262188 ZP2Q05996 745 aa28.01■■■□□ 2.07
SMARCD3-201ENST00000262188 SLC10A7Q0GE19 358 aa28.01■■■□□ 2.07
SMARCD3-201ENST00000262188 NR1H3Q13133 447 aa28.01■■■□□ 2.07
SMARCD3-201ENST00000262188 ADIPOR2Q86V24 386 aa28.01■■■□□ 2.07
SMARCD3-201ENST00000262188 CSGALNACT1Q8TDX6 532 aa28.01■■■□□ 2.07
SMARCD3-201ENST00000262188 RPL10LQ96L21 214 aaKnown RBP28.01■■■□□ 2.07
SMARCD3-201ENST00000262188 TRIM31Q9BZY9 425 aa28.01■■■□□ 2.07
SMARCD3-201ENST00000262188 HEBP1Q9NRV9 189 aa28.01■■■□□ 2.07
SMARCD3-201ENST00000262188 IGSF9Q9P2J2 1179 aa28.01■■■□□ 2.07
SMARCD3-201ENST00000262188 NEU2Q9Y3R4 380 aa28.01■■■□□ 2.07
SMARCD3-201ENST00000262188 TCF20Q9UGU0 1960 aaKnown RBP28.01■■■□□ 2.07
SMARCD3-201ENST00000262188 K7ERQ8 282 aa28■■■□□ 2.07
SMARCD3-201ENST00000262188 PTPN3P26045 913 aa28■■■□□ 2.07
SMARCD3-201ENST00000262188 STK19P49842 368 aaPredicted RBP28■■■□□ 2.07
SMARCD3-201ENST00000262188 NXPE3Q969Y0 559 aa28■■■□□ 2.07
SMARCD3-201ENST00000262188 CD160O95971 181 aa28■■■□□ 2.07
SMARCD3-201ENST00000262188 PPP1R7Q15435 360 aa28■■■□□ 2.07
SMARCD3-201ENST00000262188 TRADDQ15628 312 aa28■■■□□ 2.07
SMARCD3-201ENST00000262188 TXNDC11Q6PKC3 985 aa28■■■□□ 2.07
SMARCD3-201ENST00000262188 ZNF783Q6ZMS7 281 aa28■■■□□ 2.07
SMARCD3-201ENST00000262188 ADHFE1Q8IWW8 467 aa28■■■□□ 2.07
SMARCD3-201ENST00000262188 AGAP3Q96P47 875 aa28■■■□□ 2.07
SMARCD3-201ENST00000262188 DMGDHQ9UI17 866 aaKnown RBP28■■■□□ 2.07
SMARCD3-201ENST00000262188 TTLL3Q9Y4R7 772 aa28■■■□□ 2.07
SMARCD3-201ENST00000262188 KRT14P02533 472 aa27.99■■■□□ 2.07
SMARCD3-201ENST00000262188 NEFHP12036 1026 aa27.99■■■□□ 2.07
SMARCD3-201ENST00000262188 CCNB1P14635 433 aa27.99■■■□□ 2.07
SMARCD3-201ENST00000262188 WLSQ5T9L3 541 aa27.99■■■□□ 2.07
SMARCD3-201ENST00000262188 ZNF567Q8N184 647 aa27.99■■■□□ 2.07
SMARCD3-201ENST00000262188 CYB5D2Q8WUJ1 264 aa27.99■■■□□ 2.07
SMARCD3-201ENST00000262188 DEC1Q9P2X7 70 aa27.99■■■□□ 2.07
SMARCD3-201ENST00000262188 TTC24A2A3L6 582 aaPredicted RBP27.99■■■□□ 2.07
SMARCD3-201ENST00000262188 PRRT4C9JH25 899 aa27.99■■■□□ 2.07
SMARCD3-201ENST00000262188 MATN3O15232 486 aa27.99■■■□□ 2.07
SMARCD3-201ENST00000262188 GJB3O75712 270 aa27.99■■■□□ 2.07
SMARCD3-201ENST00000262188 IL10RBQ08334 325 aa27.99■■■□□ 2.07
SMARCD3-201ENST00000262188 FAXCQ5TGI0 409 aa27.99■■■□□ 2.07
SMARCD3-201ENST00000262188 PHTF2Q8N3S3 785 aa27.99■■■□□ 2.07
SMARCD3-201ENST00000262188 CNTD1Q8N815 330 aa27.99■■■□□ 2.07
SMARCD3-201ENST00000262188 CCDC89Q8N998 374 aa27.99■■■□□ 2.07
SMARCD3-201ENST00000262188 DCAF4L2Q8NA75 395 aa27.99■■■□□ 2.07
SMARCD3-201ENST00000262188 SLC2A11Q9BYW1 496 aa27.99■■■□□ 2.07
SMARCD3-201ENST00000262188 ZDHHC4Q9NPG8 344 aa27.99■■■□□ 2.07
SMARCD3-201ENST00000262188 HPCAL4Q9UM19 191 aa27.99■■■□□ 2.07
SMARCD3-201ENST00000262188 ESYT3A0FGR9 886 aa27.98■■■□□ 2.07
SMARCD3-201ENST00000262188 A6NNZ2 444 aa27.98■■■□□ 2.07
SMARCD3-201ENST00000262188 RPL22P35268 128 aaKnown RBP27.98■■■□□ 2.07
SMARCD3-201ENST00000262188 TUBB8Q3ZCM7 444 aa27.98■■■□□ 2.07
SMARCD3-201ENST00000262188 SYCP2LQ5T4T6 812 aa27.98■■■□□ 2.07
SMARCD3-201ENST00000262188 MBLAC2Q68D91 279 aa27.98■■■□□ 2.07
SMARCD3-201ENST00000262188 GRAMD4Q6IC98 578 aa27.98■■■□□ 2.07
SMARCD3-201ENST00000262188 CCDC26Q8TAB7 109 aa27.98■■■□□ 2.07
SMARCD3-201ENST00000262188 SH3GL3Q99963 347 aa27.98■■■□□ 2.07
SMARCD3-201ENST00000262188 CIPCQ9C0C6 399 aa27.98■■■□□ 2.07
SMARCD3-201ENST00000262188 BRD8Q9H0E9 1235 aa27.98■■■□□ 2.07
SMARCD3-201ENST00000262188 COL4A2P08572 1712 aa27.98■■■□□ 2.07
SMARCD3-201ENST00000262188 MAXP61244 160 aa27.97■■■□□ 2.07
SMARCD3-201ENST00000262188 DHX34Q14147 1143 aaKnown RBP27.97■■■□□ 2.07
SMARCD3-201ENST00000262188 RNF135Q8IUD6 432 aa27.97■■■□□ 2.07
SMARCD3-201ENST00000262188 OTUD6BQ8N6M0 293 aa27.97■■■□□ 2.07
SMARCD3-201ENST00000262188 GRK7Q8WTQ7 553 aa27.97■■■□□ 2.07
SMARCD3-201ENST00000262188 KIAA1549LQ6ZVL6 1849 aa27.97■■■□□ 2.07
SMARCD3-201ENST00000262188 MUSKO15146 869 aa27.97■■■□□ 2.07
SMARCD3-201ENST00000262188 ZBTB24O43167 697 aaPredicted RBP27.97■■■□□ 2.07
SMARCD3-201ENST00000262188 SMAD6O43541 496 aaKnown RBP27.97■■■□□ 2.07
SMARCD3-201ENST00000262188 ANKRD20A2Q5SQ80 823 aa27.97■■■□□ 2.07
SMARCD3-201ENST00000262188 ANKRD20A1Q5TYW2 823 aa27.97■■■□□ 2.07
SMARCD3-201ENST00000262188 ANKRD20A3Q5VUR7 823 aa27.97■■■□□ 2.07
SMARCD3-201ENST00000262188 KIAA0907Q7Z7F0 614 aaPredicted RBP27.97■■■□□ 2.07
SMARCD3-201ENST00000262188 DDX51Q8N8A6 666 aaKnown RBP eCLIP27.97■■■□□ 2.07
SMARCD3-201ENST00000262188 SLCO2A1Q92959 643 aa27.97■■■□□ 2.07
SMARCD3-201ENST00000262188 C2orf49Q9BVC5 232 aaPredicted RBP27.97■■■□□ 2.07
SMARCD3-201ENST00000262188 DPH5Q9H2P9 285 aa27.97■■■□□ 2.07
SMARCD3-201ENST00000262188 RBM22Q9NW64 420 aaKnown RBP eCLIP27.97■■■□□ 2.07
SMARCD3-201ENST00000262188 KLHL8Q9P2G9 620 aaPredicted RBP27.97■■■□□ 2.07
SMARCD3-201ENST00000262188 UBA2Q9UBT2 640 aaPredicted RBP27.97■■■□□ 2.07
SMARCD3-201ENST00000262188 FCF1Q9Y324 198 aaKnown RBP27.97■■■□□ 2.07
SMARCD3-201ENST00000262188 FAM169AQ9Y6X4 670 aa27.97■■■□□ 2.07
SMARCD3-201ENST00000262188 MYO18AQ92614 2054 aaKnown RBP27.96■■■□□ 2.07
SMARCD3-201ENST00000262188 HLA-DQB2P05538 268 aa27.96■■■□□ 2.07
SMARCD3-201ENST00000262188 STIP1P31948 543 aaKnown RBP27.96■■■□□ 2.07
SMARCD3-201ENST00000262188 PLK1P53350 603 aa27.96■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms