RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 GRID2O43424 1007 aa16.62■□□□□ 0.25
TM9SF1-201ENST00000261789 SLC35E2BP0CK96 405 aa16.62■□□□□ 0.25
TM9SF1-201ENST00000261789 SCAPQ12770 1279 aa16.62■□□□□ 0.25
TM9SF1-201ENST00000261789 HNRNPDQ14103 355 aaKnown RBP16.62■□□□□ 0.25
TM9SF1-201ENST00000261789 GRB14Q14449 540 aa16.62■□□□□ 0.25
TM9SF1-201ENST00000261789 PDCD2Q16342 344 aaPredicted RBP16.62■□□□□ 0.25
TM9SF1-201ENST00000261789 ANO4Q32M45 955 aa16.62■□□□□ 0.25
TM9SF1-201ENST00000261789 PAN2Q504Q3 1202 aaKnown RBP16.62■□□□□ 0.25
TM9SF1-201ENST00000261789 LDLRAD1Q5T700 205 aa16.62■□□□□ 0.25
TM9SF1-201ENST00000261789 OLFML2BQ68BL8 750 aa16.62■□□□□ 0.25
TM9SF1-201ENST00000261789 SEL1L3Q68CR1 1132 aa16.62■□□□□ 0.25
TM9SF1-201ENST00000261789 BHLHA9Q7RTU4 235 aa16.62■□□□□ 0.25
TM9SF1-201ENST00000261789 CEP97Q8IW35 865 aa16.62■□□□□ 0.25
TM9SF1-201ENST00000261789 MFSD6LQ8IWD5 586 aa16.62■□□□□ 0.25
TM9SF1-201ENST00000261789 RNF34Q969K3 372 aa16.62■□□□□ 0.25
TM9SF1-201ENST00000261789 SGF29Q96ES7 293 aa16.62■□□□□ 0.25
TM9SF1-201ENST00000261789 PPP1R10Q96QC0 940 aaKnown RBP16.62■□□□□ 0.25
TM9SF1-201ENST00000261789 GCNAQ96QF7 691 aa16.62■□□□□ 0.25
TM9SF1-201ENST00000261789 CDRT15Q96T59 188 aa16.62■□□□□ 0.25
TM9SF1-201ENST00000261789 DNAI2Q9GZS0 605 aa16.62■□□□□ 0.25
TM9SF1-201ENST00000261789 ATXN3LQ9H3M9 355 aa16.62■□□□□ 0.25
TM9SF1-201ENST00000261789 CAPN8A6NHC0 703 aa16.62■□□□□ 0.25
TM9SF1-201ENST00000261789 VAPBO95292 243 aa16.62■□□□□ 0.25
TM9SF1-201ENST00000261789 ARSAP15289 507 aa16.62■□□□□ 0.25
TM9SF1-201ENST00000261789 VCLP18206 1134 aa16.62■□□□□ 0.25
TM9SF1-201ENST00000261789 RPL14P50914 215 aaKnown RBP16.62■□□□□ 0.25
TM9SF1-201ENST00000261789 ADAM17P78536 824 aa16.62■□□□□ 0.25
TM9SF1-201ENST00000261789 CDC42EP1Q00587 391 aa16.62■□□□□ 0.25
TM9SF1-201ENST00000261789 ARL13BQ3SXY8 428 aa16.62■□□□□ 0.25
TM9SF1-201ENST00000261789 LIPMQ5VYY2 423 aa16.62■□□□□ 0.25
TM9SF1-201ENST00000261789 ZNF280DQ6N043 979 aa16.62■□□□□ 0.25
TM9SF1-201ENST00000261789 FBXL19Q6PCT2 694 aa16.62■□□□□ 0.25
TM9SF1-201ENST00000261789 TMC7Q7Z402 723 aa16.62■□□□□ 0.25
TM9SF1-201ENST00000261789 APLFQ8IW19 511 aaPredicted RBP16.62■□□□□ 0.25
TM9SF1-201ENST00000261789 DSELQ8IZU8 1212 aa16.62■□□□□ 0.25
TM9SF1-201ENST00000261789 CENPLQ8N0S6 344 aaPredicted RBP16.62■□□□□ 0.25
TM9SF1-201ENST00000261789 BRI3BPQ8WY22 251 aa16.62■□□□□ 0.25
TM9SF1-201ENST00000261789 GAD1Q99259 594 aa16.62■□□□□ 0.25
TM9SF1-201ENST00000261789 GPR22Q99680 433 aa16.62■□□□□ 0.25
TM9SF1-201ENST00000261789 DRC3Q9H069 523 aa16.62■□□□□ 0.25
TM9SF1-201ENST00000261789 MIOSQ9NXC5 875 aa16.62■□□□□ 0.25
TM9SF1-201ENST00000261789 SLC2A6Q9UGQ3 507 aa16.62■□□□□ 0.25
TM9SF1-201ENST00000261789 INPP5FQ9Y2H2 1132 aa16.62■□□□□ 0.25
TM9SF1-201ENST00000261789 HDAC3O15379 428 aa16.61■□□□□ 0.25
TM9SF1-201ENST00000261789 NCAM2O15394 837 aa16.61■□□□□ 0.25
TM9SF1-201ENST00000261789 UQCRBP14927 111 aa16.61■□□□□ 0.25
TM9SF1-201ENST00000261789 NPY2RP49146 381 aa16.61■□□□□ 0.25
TM9SF1-201ENST00000261789 THOP1P52888 689 aa16.61■□□□□ 0.25
TM9SF1-201ENST00000261789 CDH17Q12864 832 aa16.61■□□□□ 0.25
TM9SF1-201ENST00000261789 MED21Q13503 144 aa16.61■□□□□ 0.25
TM9SF1-201ENST00000261789 ITPRIPL1Q6GPH6 555 aa16.61■□□□□ 0.25
TM9SF1-201ENST00000261789 ESRP1Q6NXG1 681 aaKnown RBP16.61■□□□□ 0.25
TM9SF1-201ENST00000261789 ZYG11AQ6WRX3 759 aa16.61■□□□□ 0.25
TM9SF1-201ENST00000261789 TLK2Q86UE8 772 aa16.61■□□□□ 0.25
TM9SF1-201ENST00000261789 LSMEM2Q8N112 164 aa16.61■□□□□ 0.25
TM9SF1-201ENST00000261789 CCNYL1Q8N7R7 359 aa16.61■□□□□ 0.25
TM9SF1-201ENST00000261789 IPMKQ8NFU5 416 aa16.61■□□□□ 0.25
TM9SF1-201ENST00000261789 SREK1Q8WXA9 508 aaKnown RBP16.61■□□□□ 0.25
TM9SF1-201ENST00000261789 JADE3Q92613 823 aa16.61■□□□□ 0.25
TM9SF1-201ENST00000261789 NXNL1Q96CM4 212 aa16.61■□□□□ 0.25
TM9SF1-201ENST00000261789 RCN3Q96D15 328 aa16.61■□□□□ 0.25
TM9SF1-201ENST00000261789 RAP2CQ9Y3L5 183 aa16.61■□□□□ 0.25
TM9SF1-201ENST00000261789 CASTOR2A6NHX0 329 aa16.61■□□□□ 0.25
TM9SF1-201ENST00000261789 HHLA1C9JL84 531 aa16.61■□□□□ 0.25
TM9SF1-201ENST00000261789 MYL3P08590 195 aa16.61■□□□□ 0.25
TM9SF1-201ENST00000261789 XRCC1P18887 633 aaPredicted RBP16.61■□□□□ 0.25
TM9SF1-201ENST00000261789 LRPAP1P30533 357 aa16.61■□□□□ 0.25
TM9SF1-201ENST00000261789 EPHX2P34913 555 aa16.61■□□□□ 0.25
TM9SF1-201ENST00000261789 CSE1LP55060 971 aaKnown RBP16.61■□□□□ 0.25
TM9SF1-201ENST00000261789 MRPS22P82650 360 aaKnown RBP16.61■□□□□ 0.25
TM9SF1-201ENST00000261789 MMEL1Q495T6 779 aa16.61■□□□□ 0.25
TM9SF1-201ENST00000261789 ACAD11Q709F0 780 aa16.61■□□□□ 0.25
TM9SF1-201ENST00000261789 TAC4Q86UU9 113 aa16.61■□□□□ 0.25
TM9SF1-201ENST00000261789 EPAS1Q99814 870 aa16.61■□□□□ 0.25
TM9SF1-201ENST00000261789 SUDS3Q9H7L9 328 aaPredicted RBP16.61■□□□□ 0.25
TM9SF1-201ENST00000261789 CNGB3Q9NQW8 809 aa16.61■□□□□ 0.25
TM9SF1-201ENST00000261789 XPR1Q9UBH6 696 aa16.61■□□□□ 0.25
TM9SF1-201ENST00000261789 TRHDEQ9UKU6 1024 aa16.61■□□□□ 0.25
TM9SF1-201ENST00000261789 FIS1Q9Y3D6 152 aa16.61■□□□□ 0.25
TM9SF1-201ENST00000261789 MAGEB16A2A368 324 aa16.6■□□□□ 0.25
TM9SF1-201ENST00000261789 ERI2A8K979 691 aaKnown RBP16.6■□□□□ 0.25
TM9SF1-201ENST00000261789 DLX3O60479 287 aa16.6■□□□□ 0.25
TM9SF1-201ENST00000261789 ENO3P13929 434 aaPredicted RBP16.6■□□□□ 0.25
TM9SF1-201ENST00000261789 GRIA2P42262 883 aa16.6■□□□□ 0.25
TM9SF1-201ENST00000261789 DPP6P42658 865 aa16.6■□□□□ 0.25
TM9SF1-201ENST00000261789 NUMBP49757 651 aa16.6■□□□□ 0.25
TM9SF1-201ENST00000261789 RASIP1Q5U651 963 aa16.6■□□□□ 0.25
TM9SF1-201ENST00000261789 DPF3Q92784 378 aa16.6■□□□□ 0.25
TM9SF1-201ENST00000261789 TRAPPC9Q96Q05 1148 aa16.6■□□□□ 0.25
TM9SF1-201ENST00000261789 ZDHHC7Q9NXF8 308 aa16.6■□□□□ 0.25
TM9SF1-201ENST00000261789 PCDHGB4Q9UN71 923 aa16.6■□□□□ 0.25
TM9SF1-201ENST00000261789 GNEQ9Y223 722 aaKnown RBP16.6■□□□□ 0.25
TM9SF1-201ENST00000261789 PCDHGB5Q9Y5G0 923 aa16.6■□□□□ 0.25
TM9SF1-201ENST00000261789 RGSL1A5PLK6 1076 aa16.6■□□□□ 0.25
TM9SF1-201ENST00000261789 NEMP2A6NFY4 417 aa16.6■□□□□ 0.25
TM9SF1-201ENST00000261789 FBXO21O94952 628 aa16.6■□□□□ 0.25
TM9SF1-201ENST00000261789 PGK1P00558 417 aa16.6■□□□□ 0.25
TM9SF1-201ENST00000261789 THRAP10827 490 aa16.6■□□□□ 0.25
TM9SF1-201ENST00000261789 TCN1P20061 433 aaPredicted RBP16.6■□□□□ 0.25
TM9SF1-201ENST00000261789 PRDX6P30041 224 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms