RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 ZNF423Q2M1K9 1284 aa10.99□□□□□ -0.65
CHRNA1-201ENST00000261007 C1QTNF12Q5T7M4 302 aa10.99□□□□□ -0.65
CHRNA1-201ENST00000261007 LRRC8BQ6P9F7 803 aa10.99□□□□□ -0.65
CHRNA1-201ENST00000261007 NPNTQ6UXI9 565 aa10.99□□□□□ -0.65
CHRNA1-201ENST00000261007 TSPAN14Q8NG11 270 aa10.99□□□□□ -0.65
CHRNA1-201ENST00000261007 VPS50Q96JG6 964 aa10.99□□□□□ -0.65
CHRNA1-201ENST00000261007 CNDP1Q96KN2 507 aa10.99□□□□□ -0.65
CHRNA1-201ENST00000261007 SLC9A7Q96T83 725 aa10.99□□□□□ -0.65
CHRNA1-201ENST00000261007 DHX35Q9H5Z1 703 aaKnown RBP10.99□□□□□ -0.65
CHRNA1-201ENST00000261007 LRRC4Q9HBW1 653 aa10.99□□□□□ -0.65
CHRNA1-201ENST00000261007 RRN3Q9NYV6 651 aa10.99□□□□□ -0.65
CHRNA1-201ENST00000261007 ITGB1BP2Q9UKP3 347 aa10.99□□□□□ -0.65
CHRNA1-201ENST00000261007 FAF1Q9UNN5 650 aaPredicted RBP10.99□□□□□ -0.65
CHRNA1-201ENST00000261007 PTCH2Q9Y6C5 1203 aa10.99□□□□□ -0.65
CHRNA1-201ENST00000261007 KANSL1LA0AUZ9 987 aa10.99□□□□□ -0.65
CHRNA1-201ENST00000261007 ARHGEF37A1IGU5 675 aa10.99□□□□□ -0.65
CHRNA1-201ENST00000261007 RGSL1A5PLK6 1076 aa10.99□□□□□ -0.65
CHRNA1-201ENST00000261007 ZNF701M0R085 212 aaPredicted RBP10.99□□□□□ -0.65
CHRNA1-201ENST00000261007 DCXO43602 365 aa10.99□□□□□ -0.65
CHRNA1-201ENST00000261007 GCATO75600 419 aa10.99□□□□□ -0.65
CHRNA1-201ENST00000261007 ALDH1A2O94788 518 aa10.99□□□□□ -0.65
CHRNA1-201ENST00000261007 THP07101 528 aa10.99□□□□□ -0.65
CHRNA1-201ENST00000261007 RALBP11234 206 aa10.99□□□□□ -0.65
CHRNA1-201ENST00000261007 PSMC3P17980 439 aa10.99□□□□□ -0.65
CHRNA1-201ENST00000261007 GLDCP23378 1020 aa10.99□□□□□ -0.65
CHRNA1-201ENST00000261007 LMO2P25791 158 aa10.99□□□□□ -0.65
CHRNA1-201ENST00000261007 NRLP54845 237 aa10.99□□□□□ -0.65
CHRNA1-201ENST00000261007 PLOD1Q02809 727 aaPredicted RBP10.99□□□□□ -0.65
CHRNA1-201ENST00000261007 SOX4Q06945 474 aaPredicted RBP10.99□□□□□ -0.65
CHRNA1-201ENST00000261007 DPYSQ14117 519 aa10.99□□□□□ -0.65
CHRNA1-201ENST00000261007 FLOT2Q14254 428 aa10.99□□□□□ -0.65
CHRNA1-201ENST00000261007 PIGGQ5H8A4 983 aa10.99□□□□□ -0.65
CHRNA1-201ENST00000261007 STEAP4Q687X5 459 aa10.99□□□□□ -0.65
CHRNA1-201ENST00000261007 C16orf46Q6P387 395 aa10.99□□□□□ -0.65
CHRNA1-201ENST00000261007 BNC2Q6ZN30 1099 aaPredicted RBP10.99□□□□□ -0.65
CHRNA1-201ENST00000261007 PATL1Q86TB9 770 aaKnown RBP10.99□□□□□ -0.65
CHRNA1-201ENST00000261007 PIGZQ86VD9 579 aa10.99□□□□□ -0.65
CHRNA1-201ENST00000261007 CHERPQ8IWX8 916 aaKnown RBP10.99□□□□□ -0.65
CHRNA1-201ENST00000261007 SIX6OS1Q8N1H7 587 aa10.99□□□□□ -0.65
CHRNA1-201ENST00000261007 PHTF2Q8N3S3 785 aa10.99□□□□□ -0.65
CHRNA1-201ENST00000261007 TRIML2Q8N7C3 387 aa10.99□□□□□ -0.65
CHRNA1-201ENST00000261007 KYQ8NBH2 561 aa10.99□□□□□ -0.65
CHRNA1-201ENST00000261007 RP9Q8TA86 221 aaKnown RBP10.99□□□□□ -0.65
CHRNA1-201ENST00000261007 QKIQ96PU8 341 aaKnown RBP eCLIP10.99□□□□□ -0.65
CHRNA1-201ENST00000261007 B3GNT5Q9BYG0 378 aa10.99□□□□□ -0.65
CHRNA1-201ENST00000261007 OSBPL6Q9BZF3 934 aa10.99□□□□□ -0.65
CHRNA1-201ENST00000261007 CDH19Q9H159 772 aa10.99□□□□□ -0.65
CHRNA1-201ENST00000261007 TSPYL2Q9H2G4 693 aaPredicted RBP10.99□□□□□ -0.65
CHRNA1-201ENST00000261007 FAM105AQ9NUU6 356 aa10.99□□□□□ -0.65
CHRNA1-201ENST00000261007 PCDHGB4Q9UN71 923 aa10.99□□□□□ -0.65
CHRNA1-201ENST00000261007 PCDHB12Q9Y5F1 795 aa10.99□□□□□ -0.65
CHRNA1-201ENST00000261007 PCDHGB5Q9Y5G0 923 aa10.99□□□□□ -0.65
CHRNA1-201ENST00000261007 HEY1Q9Y5J3 304 aa10.99□□□□□ -0.65
CHRNA1-201ENST00000261007 RAD54BQ9Y620 910 aa10.99□□□□□ -0.65
CHRNA1-201ENST00000261007 DOCK3Q8IZD9 2030 aa10.99□□□□□ -0.65
CHRNA1-201ENST00000261007 TMEM114B3SHH9 223 aa10.98□□□□□ -0.65
CHRNA1-201ENST00000261007 PTGESO14684 152 aa10.98□□□□□ -0.65
CHRNA1-201ENST00000261007 ZBTB14O43829 449 aa10.98□□□□□ -0.65
CHRNA1-201ENST00000261007 H6PDO95479 791 aa10.98□□□□□ -0.65
CHRNA1-201ENST00000261007 PORP16435 677 aaPredicted RBP10.98□□□□□ -0.65
CHRNA1-201ENST00000261007 MX2P20592 715 aa10.98□□□□□ -0.65
CHRNA1-201ENST00000261007 RBL1P28749 1068 aa10.98□□□□□ -0.65
CHRNA1-201ENST00000261007 SULT1E1P49888 294 aa10.98□□□□□ -0.65
CHRNA1-201ENST00000261007 HK2P52789 917 aa10.98□□□□□ -0.65
CHRNA1-201ENST00000261007 FCGRTP55899 365 aa10.98□□□□□ -0.65
CHRNA1-201ENST00000261007 CDKL1Q00532 357 aa10.98□□□□□ -0.65
CHRNA1-201ENST00000261007 PDAP1Q13442 181 aaKnown RBP10.98□□□□□ -0.65
CHRNA1-201ENST00000261007 PDE1CQ14123 709 aaPredicted RBP10.98□□□□□ -0.65
CHRNA1-201ENST00000261007 CCDC153Q494R4 210 aa10.98□□□□□ -0.65
CHRNA1-201ENST00000261007 PPP6R3Q5H9R7 873 aaPredicted RBP10.98□□□□□ -0.65
CHRNA1-201ENST00000261007 C6orf52Q5T4I8 152 aa10.98□□□□□ -0.65
CHRNA1-201ENST00000261007 TRMT10BQ6PF06 316 aaKnown RBP10.98□□□□□ -0.65
CHRNA1-201ENST00000261007 C10orf107Q8IVU9 208 aa10.98□□□□□ -0.65
CHRNA1-201ENST00000261007 HM13Q8TCT9 377 aa10.98□□□□□ -0.65
CHRNA1-201ENST00000261007 NT5C3BQ969T7 300 aa10.98□□□□□ -0.65
CHRNA1-201ENST00000261007 CSPG4P5Q96PW8 444 aa10.98□□□□□ -0.65
CHRNA1-201ENST00000261007 CCT7Q99832 543 aa10.98□□□□□ -0.65
CHRNA1-201ENST00000261007 NUF2Q9BZD4 464 aa10.98□□□□□ -0.65
CHRNA1-201ENST00000261007 SHCBP1LQ9BZQ2 653 aa10.98□□□□□ -0.65
CHRNA1-201ENST00000261007 VPS45Q9NRW7 570 aa10.98□□□□□ -0.65
CHRNA1-201ENST00000261007 GPATCH2LQ9NWQ4 482 aa10.98□□□□□ -0.65
CHRNA1-201ENST00000261007 COPG2Q9UBF2 871 aa10.98□□□□□ -0.65
CHRNA1-201ENST00000261007 CDH9Q9ULB4 789 aa10.98□□□□□ -0.65
CHRNA1-201ENST00000261007 FZD10Q9ULW2 581 aa10.98□□□□□ -0.65
CHRNA1-201ENST00000261007 TRIP12Q14669 1992 aaPredicted RBP10.98□□□□□ -0.65
CHRNA1-201ENST00000261007 SCN10AQ9Y5Y9 1956 aa10.98□□□□□ -0.65
CHRNA1-201ENST00000261007 H2AFYO75367 372 aaKnown RBP10.97□□□□□ -0.65
CHRNA1-201ENST00000261007 BCAS2O75934 225 aaPredicted RBP10.97□□□□□ -0.65
CHRNA1-201ENST00000261007 C8BP07358 591 aa10.97□□□□□ -0.65
CHRNA1-201ENST00000261007 APRTP07741 180 aa10.97□□□□□ -0.65
CHRNA1-201ENST00000261007 CYBAP13498 195 aa10.97□□□□□ -0.65
CHRNA1-201ENST00000261007 VARSP26640 1264 aaKnown RBP10.97□□□□□ -0.65
CHRNA1-201ENST00000261007 PCSK1P29120 753 aa10.97□□□□□ -0.65
CHRNA1-201ENST00000261007 ADIGQ0VDE8 80 aa10.97□□□□□ -0.65
CHRNA1-201ENST00000261007 RFTN1Q14699 578 aaPredicted RBP10.97□□□□□ -0.65
CHRNA1-201ENST00000261007 HERC3Q15034 1050 aa10.97□□□□□ -0.65
CHRNA1-201ENST00000261007 CA9Q16790 459 aa10.97□□□□□ -0.65
CHRNA1-201ENST00000261007 PDCD4Q53EL6 469 aaKnown RBP10.97□□□□□ -0.65
CHRNA1-201ENST00000261007 GNASQ5JWF2 1037 aa10.97□□□□□ -0.65
CHRNA1-201ENST00000261007 HEATR6Q6AI08 1181 aaKnown RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms