RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 GEMP55040 296 aa22.74■■□□□ 1.23
SIX3-201ENST00000260653 GNA12Q03113 381 aa22.74■■□□□ 1.23
SIX3-201ENST00000260653 CDH17Q12864 832 aa22.74■■□□□ 1.23
SIX3-201ENST00000260653 LRRC14Q15048 493 aa22.74■■□□□ 1.23
SIX3-201ENST00000260653 FAM109BQ6ICB4 259 aaPredicted RBP22.74■■□□□ 1.23
SIX3-201ENST00000260653 ELMOD1Q8N336 334 aa22.74■■□□□ 1.23
SIX3-201ENST00000260653 FICDQ9BVA6 458 aa22.74■■□□□ 1.23
SIX3-201ENST00000260653 ATXN3LQ9H3M9 355 aa22.74■■□□□ 1.23
SIX3-201ENST00000260653 MLXIPLQ9NP71 852 aa22.74■■□□□ 1.23
SIX3-201ENST00000260653 IL1RAPL1Q9NZN1 696 aa22.74■■□□□ 1.23
SIX3-201ENST00000260653 RPS6KL1Q9Y6S9 549 aa22.74■■□□□ 1.23
SIX3-201ENST00000260653 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.74■■□□□ 1.23
SIX3-201ENST00000260653 PRAMEF11O60813 436 aa22.74■■□□□ 1.23
SIX3-201ENST00000260653 ALDH1A2O94788 518 aa22.74■■□□□ 1.23
SIX3-201ENST00000260653 HOXD9P28356 352 aaPredicted RBP22.74■■□□□ 1.23
SIX3-201ENST00000260653 CAMK1Q14012 370 aa22.74■■□□□ 1.23
SIX3-201ENST00000260653 LINC00523Q86TU6 105 aa22.74■■□□□ 1.23
SIX3-201ENST00000260653 TEX26Q8N6G2 289 aa22.74■■□□□ 1.23
SIX3-201ENST00000260653 NSMCE1Q8WV22 266 aa22.74■■□□□ 1.23
SIX3-201ENST00000260653 CENPTQ96BT3 561 aa22.74■■□□□ 1.23
SIX3-201ENST00000260653 HCFC1R1Q9NWW0 138 aa22.74■■□□□ 1.23
SIX3-201ENST00000260653 SENP1Q9P0U3 644 aa22.74■■□□□ 1.23
SIX3-201ENST00000260653 SLC17A6Q9P2U8 582 aa22.74■■□□□ 1.23
SIX3-201ENST00000260653 STOML2Q9UJZ1 356 aa22.74■■□□□ 1.23
SIX3-201ENST00000260653 A0A1B0GVM2 712 aa22.73■■□□□ 1.23
SIX3-201ENST00000260653 TCAF2A6NFQ2 919 aa22.73■■□□□ 1.23
SIX3-201ENST00000260653 GRM6O15303 877 aa22.73■■□□□ 1.23
SIX3-201ENST00000260653 CKMP06732 381 aa22.73■■□□□ 1.23
SIX3-201ENST00000260653 MYL4P12829 197 aa22.73■■□□□ 1.23
SIX3-201ENST00000260653 ITKQ08881 620 aa22.73■■□□□ 1.23
SIX3-201ENST00000260653 PPM1LQ5SGD2 360 aa22.73■■□□□ 1.23
SIX3-201ENST00000260653 KDELC2Q7Z4H8 507 aa22.73■■□□□ 1.23
SIX3-201ENST00000260653 MRGPRX2Q96LB1 330 aa22.73■■□□□ 1.23
SIX3-201ENST00000260653 FCRL3Q96P31 734 aaPredicted RBP22.73■■□□□ 1.23
SIX3-201ENST00000260653 SMC6Q96SB8 1091 aa22.73■■□□□ 1.23
SIX3-201ENST00000260653 SLC25A51Q9H1U9 297 aa22.73■■□□□ 1.23
SIX3-201ENST00000260653 EPN3Q9H201 632 aa22.73■■□□□ 1.23
SIX3-201ENST00000260653 MAGEH1Q9H213 219 aa22.73■■□□□ 1.23
SIX3-201ENST00000260653 RWDD3Q9Y3V2 267 aa22.73■■□□□ 1.23
SIX3-201ENST00000260653 RFPL2O75678 378 aa22.73■■□□□ 1.23
SIX3-201ENST00000260653 POLBP06746 335 aa22.73■■□□□ 1.23
SIX3-201ENST00000260653 KRT4P19013 534 aa22.73■■□□□ 1.23
SIX3-201ENST00000260653 ADRA1AP35348 466 aa22.73■■□□□ 1.23
SIX3-201ENST00000260653 C9orf50Q5SZB4 431 aa22.73■■□□□ 1.23
SIX3-201ENST00000260653 PGBD5Q8N414 524 aa22.73■■□□□ 1.23
SIX3-201ENST00000260653 PDFQ9HBH1 243 aa22.73■■□□□ 1.23
SIX3-201ENST00000260653 IQANK1A0A1B0GTG1 560 aa22.72■■□□□ 1.23
SIX3-201ENST00000260653 TTC24A2A3L6 582 aaPredicted RBP22.72■■□□□ 1.23
SIX3-201ENST00000260653 DSC2Q02487 901 aa22.72■■□□□ 1.23
SIX3-201ENST00000260653 NIPAL4Q0D2K0 466 aa22.72■■□□□ 1.23
SIX3-201ENST00000260653 LBRQ14739 615 aaKnown RBP22.72■■□□□ 1.23
SIX3-201ENST00000260653 DENND5AQ6IQ26 1287 aa22.72■■□□□ 1.23
SIX3-201ENST00000260653 CYS1Q717R9 158 aa22.72■■□□□ 1.23
SIX3-201ENST00000260653 BCAS4Q8TDM0 211 aa22.72■■□□□ 1.23
SIX3-201ENST00000260653 ZNF669Q96BR6 464 aaPredicted RBP22.72■■□□□ 1.23
SIX3-201ENST00000260653 IMP4Q96G21 291 aaKnown RBP22.72■■□□□ 1.23
SIX3-201ENST00000260653 KLF6Q99612 283 aaPredicted RBP22.72■■□□□ 1.23
SIX3-201ENST00000260653 FSD1LQ9BXM9 530 aa22.72■■□□□ 1.23
SIX3-201ENST00000260653 IL22Q9GZX6 179 aa22.72■■□□□ 1.23
SIX3-201ENST00000260653 RETREG1Q9H6L5 497 aa22.72■■□□□ 1.23
SIX3-201ENST00000260653 ASAH2Q9NR71 780 aa22.72■■□□□ 1.23
SIX3-201ENST00000260653 ACTL7AQ9Y615 435 aa22.72■■□□□ 1.23
SIX3-201ENST00000260653 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP22.72■■□□□ 1.23
SIX3-201ENST00000260653 CCR2P41597 374 aa22.72■■□□□ 1.23
SIX3-201ENST00000260653 NPY2RP49146 381 aa22.72■■□□□ 1.23
SIX3-201ENST00000260653 ZNF177Q13360 481 aaPredicted RBP22.72■■□□□ 1.23
SIX3-201ENST00000260653 PCSK7Q16549 785 aa22.72■■□□□ 1.23
SIX3-201ENST00000260653 IL31Q6EBC2 164 aa22.72■■□□□ 1.23
SIX3-201ENST00000260653 Q6ZNB5 142 aa22.72■■□□□ 1.23
SIX3-201ENST00000260653 CHST9Q7L1S5 443 aa22.72■■□□□ 1.23
SIX3-201ENST00000260653 TTC17Q96AE7 1141 aa22.72■■□□□ 1.23
SIX3-201ENST00000260653 PPP1R2P1Q96PQ5 205 aa22.72■■□□□ 1.23
SIX3-201ENST00000260653 DDX50Q9BQ39 737 aaKnown RBP22.72■■□□□ 1.23
SIX3-201ENST00000260653 C5orf67F2Z3F1 127 aa22.71■■□□□ 1.23
SIX3-201ENST00000260653 GOLGA8RI6L899 631 aa22.71■■□□□ 1.23
SIX3-201ENST00000260653 GLDCP23378 1020 aa22.71■■□□□ 1.23
SIX3-201ENST00000260653 CD86P42081 329 aa22.71■■□□□ 1.23
SIX3-201ENST00000260653 IHHQ14623 411 aa22.71■■□□□ 1.23
SIX3-201ENST00000260653 TMCO4Q5TGY1 634 aa22.71■■□□□ 1.23
SIX3-201ENST00000260653 TMEM135Q86UB9 458 aa22.71■■□□□ 1.23
SIX3-201ENST00000260653 MFSD3Q96ES6 412 aa22.71■■□□□ 1.23
SIX3-201ENST00000260653 SPON2Q9BUD6 331 aa22.71■■□□□ 1.23
SIX3-201ENST00000260653 HTATIP2Q9BUP3 242 aa22.71■■□□□ 1.23
SIX3-201ENST00000260653 CHRAC1Q9NRG0 131 aa22.71■■□□□ 1.23
SIX3-201ENST00000260653 ZNF180Q9UJW8 692 aa22.71■■□□□ 1.23
SIX3-201ENST00000260653 MIA3Q5JRA6 1907 aa22.71■■□□□ 1.23
SIX3-201ENST00000260653 FAM47DPA6NHR8 397 aa22.71■■□□□ 1.23
SIX3-201ENST00000260653 LATS1O95835 1130 aa22.71■■□□□ 1.23
SIX3-201ENST00000260653 RHOCP08134 193 aa22.71■■□□□ 1.23
SIX3-201ENST00000260653 CDC25CP30307 473 aa22.71■■□□□ 1.23
SIX3-201ENST00000260653 UBE3AQ05086 875 aa22.71■■□□□ 1.23
SIX3-201ENST00000260653 TNK2Q07912 1038 aa22.71■■□□□ 1.23
SIX3-201ENST00000260653 SPANXN3Q5MJ09 141 aa22.71■■□□□ 1.23
SIX3-201ENST00000260653 KDELC1Q6UW63 502 aa22.71■■□□□ 1.23
SIX3-201ENST00000260653 GCNAQ96QF7 691 aa22.71■■□□□ 1.23
SIX3-201ENST00000260653 MAN1C1Q9NR34 630 aa22.71■■□□□ 1.23
SIX3-201ENST00000260653 MUSKO15146 869 aa22.7■■□□□ 1.22
SIX3-201ENST00000260653 GJB3O75712 270 aa22.7■■□□□ 1.22
SIX3-201ENST00000260653 CA3P07451 260 aa22.7■■□□□ 1.22
SIX3-201ENST00000260653 MMP2P08253 660 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms