RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 EXOC4Q96A65 974 aa16.09■□□□□ 0.17
CCDC90B-201ENST00000260054 RTP4Q96DX8 246 aa16.09■□□□□ 0.17
CCDC90B-201ENST00000260054 IL12RB2Q99665 862 aa16.09■□□□□ 0.17
CCDC90B-201ENST00000260054 PCYOX1Q9UHG3 505 aa16.09■□□□□ 0.17
CCDC90B-201ENST00000260054 STARD13Q9Y3M8 1113 aa16.09■□□□□ 0.17
CCDC90B-201ENST00000260054 MAN2B1O00754 1011 aa16.08■□□□□ 0.17
CCDC90B-201ENST00000260054 IFNB1P01574 187 aa16.08■□□□□ 0.17
CCDC90B-201ENST00000260054 CHRM1P11229 460 aaPredicted RBP16.08■□□□□ 0.17
CCDC90B-201ENST00000260054 ETS1P14921 441 aa16.08■□□□□ 0.17
CCDC90B-201ENST00000260054 DRD1P21728 446 aa16.08■□□□□ 0.17
CCDC90B-201ENST00000260054 TNFRSF4P43489 277 aa16.08■□□□□ 0.17
CCDC90B-201ENST00000260054 KIR2DL1P43626 348 aaPredicted RBP16.08■□□□□ 0.17
CCDC90B-201ENST00000260054 RENBPP51606 427 aa16.08■□□□□ 0.17
CCDC90B-201ENST00000260054 GEMIN4P57678 1058 aaKnown RBP16.08■□□□□ 0.17
CCDC90B-201ENST00000260054 SLC20A2Q08357 652 aa16.08■□□□□ 0.17
CCDC90B-201ENST00000260054 ZNF234Q14588 700 aa16.08■□□□□ 0.17
CCDC90B-201ENST00000260054 RFTN1Q14699 578 aaPredicted RBP16.08■□□□□ 0.17
CCDC90B-201ENST00000260054 TEX44Q53QW1 395 aa16.08■□□□□ 0.17
CCDC90B-201ENST00000260054 EGFLAMQ63HQ2 1017 aa16.08■□□□□ 0.17
CCDC90B-201ENST00000260054 ZNF852Q6ZMS4 543 aa16.08■□□□□ 0.17
CCDC90B-201ENST00000260054 SH2D3CQ8N5H7 860 aa16.08■□□□□ 0.17
CCDC90B-201ENST00000260054 NSMCE1Q8WV22 266 aa16.08■□□□□ 0.17
CCDC90B-201ENST00000260054 UCMAQ8WVF2 138 aa16.08■□□□□ 0.17
CCDC90B-201ENST00000260054 FERMT1Q9BQL6 677 aa16.08■□□□□ 0.17
CCDC90B-201ENST00000260054 ZDHHC4Q9NPG8 344 aa16.08■□□□□ 0.17
CCDC90B-201ENST00000260054 RBM22Q9NW64 420 aaKnown RBP eCLIP16.08■□□□□ 0.17
CCDC90B-201ENST00000260054 A0A0C4DFX4 3053 aa16.08■□□□□ 0.16
CCDC90B-201ENST00000260054 MUSKO15146 869 aa16.08■□□□□ 0.16
CCDC90B-201ENST00000260054 HLA-DQB2P05538 268 aa16.08■□□□□ 0.16
CCDC90B-201ENST00000260054 SRPRAP08240 638 aaKnown RBP16.08■□□□□ 0.16
CCDC90B-201ENST00000260054 ZSCAN5DPP0CG00 497 aa16.08■□□□□ 0.16
CCDC90B-201ENST00000260054 PTGIRP43119 386 aa16.08■□□□□ 0.16
CCDC90B-201ENST00000260054 MMP13P45452 471 aa16.08■□□□□ 0.16
CCDC90B-201ENST00000260054 SEC13P55735 322 aa16.08■□□□□ 0.16
CCDC90B-201ENST00000260054 MRPS25P82663 173 aaKnown RBP16.08■□□□□ 0.16
CCDC90B-201ENST00000260054 GSTA5Q7RTV2 222 aa16.08■□□□□ 0.16
CCDC90B-201ENST00000260054 ZNF567Q8N184 647 aa16.08■□□□□ 0.16
CCDC90B-201ENST00000260054 SIX5Q8N196 739 aa16.08■□□□□ 0.16
CCDC90B-201ENST00000260054 PGBD5Q8N414 524 aa16.08■□□□□ 0.16
CCDC90B-201ENST00000260054 NOA1Q8NC60 698 aaKnown RBP16.08■□□□□ 0.16
CCDC90B-201ENST00000260054 TSEN2Q8NCE0 465 aaKnown RBP16.08■□□□□ 0.16
CCDC90B-201ENST00000260054 CCDC110Q8TBZ0 833 aa16.08■□□□□ 0.16
CCDC90B-201ENST00000260054 CASKIN2Q8WXE0 1202 aa16.08■□□□□ 0.16
CCDC90B-201ENST00000260054 SLCO2A1Q92959 643 aa16.08■□□□□ 0.16
CCDC90B-201ENST00000260054 AGAP3Q96P47 875 aa16.08■□□□□ 0.16
CCDC90B-201ENST00000260054 UHRF1Q96T88 793 aaPredicted RBP16.08■□□□□ 0.16
CCDC90B-201ENST00000260054 ACOX2Q99424 681 aa16.08■□□□□ 0.16
CCDC90B-201ENST00000260054 THAP10Q9P2Z0 257 aaPredicted RBP16.08■□□□□ 0.16
CCDC90B-201ENST00000260054 SEPT3Q9UH03 358 aa16.08■□□□□ 0.16
CCDC90B-201ENST00000260054 NDRG2Q9UN36 371 aaKnown RBP16.08■□□□□ 0.16
CCDC90B-201ENST00000260054 PLA2G4CQ9UP65 541 aa16.08■□□□□ 0.16
CCDC90B-201ENST00000260054 NEU2Q9Y3R4 380 aa16.08■□□□□ 0.16
CCDC90B-201ENST00000260054 MUC22E2RYF6 1773 aaPredicted RBP16.08■□□□□ 0.16
CCDC90B-201ENST00000260054 MUC3AQ02505 3323 aa16.07■□□□□ 0.16
CCDC90B-201ENST00000260054 C5orf60A6NFR6 353 aa16.07■□□□□ 0.16
CCDC90B-201ENST00000260054 TTC34A8MYJ7 566 aa16.07■□□□□ 0.16
CCDC90B-201ENST00000260054 ATP9BO43861 1147 aa16.07■□□□□ 0.16
CCDC90B-201ENST00000260054 ZNF821O75541 412 aaPredicted RBP16.07■□□□□ 0.16
CCDC90B-201ENST00000260054 ZNF189O75820 626 aaPredicted RBP16.07■□□□□ 0.16
CCDC90B-201ENST00000260054 ECEL1O95672 775 aa16.07■□□□□ 0.16
CCDC90B-201ENST00000260054 VASPP50552 380 aaPredicted RBP16.07■□□□□ 0.16
CCDC90B-201ENST00000260054 STARD6P59095 220 aa16.07■□□□□ 0.16
CCDC90B-201ENST00000260054 ZXDAP98168 799 aa16.07■□□□□ 0.16
CCDC90B-201ENST00000260054 DR1Q01658 176 aa16.07■□□□□ 0.16
CCDC90B-201ENST00000260054 LMNB2Q03252 620 aa16.07■□□□□ 0.16
CCDC90B-201ENST00000260054 CCINQ13939 588 aa16.07■□□□□ 0.16
CCDC90B-201ENST00000260054 ZNF235Q14590 738 aa16.07■□□□□ 0.16
CCDC90B-201ENST00000260054 DGKKQ5KSL6 1271 aa16.07■□□□□ 0.16
CCDC90B-201ENST00000260054 ANKRD20A2Q5SQ80 823 aa16.07■□□□□ 0.16
CCDC90B-201ENST00000260054 ANKRD20A1Q5TYW2 823 aa16.07■□□□□ 0.16
CCDC90B-201ENST00000260054 ANKRD20A3Q5VUR7 823 aa16.07■□□□□ 0.16
CCDC90B-201ENST00000260054 ZNF687Q8N1G0 1237 aa16.07■□□□□ 0.16
CCDC90B-201ENST00000260054 GRK7Q8WTQ7 553 aa16.07■□□□□ 0.16
CCDC90B-201ENST00000260054 TEKT5Q96M29 485 aa16.07■□□□□ 0.16
CCDC90B-201ENST00000260054 SPATA13Q96N96 652 aa16.07■□□□□ 0.16
CCDC90B-201ENST00000260054 RUNDC3BQ96NL0 473 aa16.07■□□□□ 0.16
CCDC90B-201ENST00000260054 PSKH2Q96QS6 385 aa16.07■□□□□ 0.16
CCDC90B-201ENST00000260054 VAT1Q99536 393 aa16.07■□□□□ 0.16
CCDC90B-201ENST00000260054 CINPQ9BW66 212 aaPredicted RBP16.07■□□□□ 0.16
CCDC90B-201ENST00000260054 NT5MQ9NPB1 228 aa16.07■□□□□ 0.16
CCDC90B-201ENST00000260054 KLHL8Q9P2G9 620 aaPredicted RBP16.07■□□□□ 0.16
CCDC90B-201ENST00000260054 LHX3Q9UBR4 397 aa16.07■□□□□ 0.16
CCDC90B-201ENST00000260054 TTI1O43156 1089 aa16.06■□□□□ 0.16
CCDC90B-201ENST00000260054 ZBTB24O43167 697 aaPredicted RBP16.06■□□□□ 0.16
CCDC90B-201ENST00000260054 GCATO75600 419 aa16.06■□□□□ 0.16
CCDC90B-201ENST00000260054 STK10O94804 968 aaKnown RBP16.06■□□□□ 0.16
CCDC90B-201ENST00000260054 HNRNPLP14866 589 aaKnown RBP eCLIP16.06■□□□□ 0.16
CCDC90B-201ENST00000260054 CD68P34810 354 aaPredicted RBP16.06■□□□□ 0.16
CCDC90B-201ENST00000260054 TIE1P35590 1138 aa16.06■□□□□ 0.16
CCDC90B-201ENST00000260054 NNMTP40261 264 aa16.06■□□□□ 0.16
CCDC90B-201ENST00000260054 RGRP47804 291 aa16.06■□□□□ 0.16
CCDC90B-201ENST00000260054 MAXP61244 160 aa16.06■□□□□ 0.16
CCDC90B-201ENST00000260054 ST8SIA6P61647 398 aa16.06■□□□□ 0.16
CCDC90B-201ENST00000260054 TRIP13Q15645 432 aaPredicted RBP16.06■□□□□ 0.16
CCDC90B-201ENST00000260054 DLG2Q15700 870 aa16.06■□□□□ 0.16
CCDC90B-201ENST00000260054 P3H1Q32P28 736 aa16.06■□□□□ 0.16
CCDC90B-201ENST00000260054 ACCSLQ4AC99 568 aa16.06■□□□□ 0.16
CCDC90B-201ENST00000260054 FNDC3BQ53EP0 1204 aaKnown RBP16.06■□□□□ 0.16
CCDC90B-201ENST00000260054 C22orf39Q6P5X5 142 aa16.06■□□□□ 0.16
CCDC90B-201ENST00000260054 PID1Q7Z2X4 250 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms