RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 COPB1P53618 953 aaKnown RBP19.43■□□□□ 0.7
TM6SF1-201ENST00000258909 DNAJC3Q13217 504 aa19.43■□□□□ 0.7
TM6SF1-201ENST00000258909 STAT4Q14765 748 aa19.43■□□□□ 0.7
TM6SF1-201ENST00000258909 DHRS13Q6UX07 377 aa19.43■□□□□ 0.7
TM6SF1-201ENST00000258909 DPY19L3Q6ZPD9 716 aa19.43■□□□□ 0.7
TM6SF1-201ENST00000258909 ARCQ7LC44 396 aa19.43■□□□□ 0.7
TM6SF1-201ENST00000258909 PROSER1Q86XN7 944 aa19.43■□□□□ 0.7
TM6SF1-201ENST00000258909 NDFIP2Q9NV92 336 aa19.43■□□□□ 0.7
TM6SF1-201ENST00000258909 FAM72CH0Y354 149 aa19.42■□□□□ 0.7
TM6SF1-201ENST00000258909 ZNF821O75541 412 aaPredicted RBP19.42■□□□□ 0.7
TM6SF1-201ENST00000258909 ZMPSTE24O75844 475 aa19.42■□□□□ 0.7
TM6SF1-201ENST00000258909 SDC4P31431 198 aa19.42■□□□□ 0.7
TM6SF1-201ENST00000258909 STAT1P42224 750 aa19.42■□□□□ 0.7
TM6SF1-201ENST00000258909 CLCN6P51797 869 aa19.42■□□□□ 0.7
TM6SF1-201ENST00000258909 ARF5P84085 180 aa19.42■□□□□ 0.7
TM6SF1-201ENST00000258909 GNA12Q03113 381 aa19.42■□□□□ 0.7
TM6SF1-201ENST00000258909 SETMARQ53H47 684 aaPredicted RBP19.42■□□□□ 0.7
TM6SF1-201ENST00000258909 ACBD5Q5T8D3 534 aaPredicted RBP19.42■□□□□ 0.7
TM6SF1-201ENST00000258909 FAM72AQ5TYM5 149 aa19.42■□□□□ 0.7
TM6SF1-201ENST00000258909 FAM72DQ6L9T8 149 aa19.42■□□□□ 0.7
TM6SF1-201ENST00000258909 RWDD4Q6NW29 188 aaKnown RBP19.42■□□□□ 0.7
TM6SF1-201ENST00000258909 FAM72BQ86X60 149 aa19.42■□□□□ 0.7
TM6SF1-201ENST00000258909 TMIEQ8NEW7 156 aa19.42■□□□□ 0.7
TM6SF1-201ENST00000258909 CNDP2Q96KP4 475 aaKnown RBP19.42■□□□□ 0.7
TM6SF1-201ENST00000258909 CCDC86Q9H6F5 360 aaKnown RBP19.42■□□□□ 0.7
TM6SF1-201ENST00000258909 PREBQ9HCU5 417 aa19.42■□□□□ 0.7
TM6SF1-201ENST00000258909 DYRK4Q9NR20 520 aa19.42■□□□□ 0.7
TM6SF1-201ENST00000258909 TMEM51Q9NW97 253 aa19.42■□□□□ 0.7
TM6SF1-201ENST00000258909 IL36AQ9UHA7 158 aa19.42■□□□□ 0.7
TM6SF1-201ENST00000258909 DMTF1Q9Y222 760 aa19.42■□□□□ 0.7
TM6SF1-201ENST00000258909 FCF1Q9Y324 198 aaKnown RBP19.42■□□□□ 0.7
TM6SF1-201ENST00000258909 KNTC1P50748 2209 aa19.42■□□□□ 0.7
TM6SF1-201ENST00000258909 LEFTY1O75610 366 aa19.41■□□□□ 0.7
TM6SF1-201ENST00000258909 LDOC1O95751 146 aaPredicted RBP19.41■□□□□ 0.7
TM6SF1-201ENST00000258909 PRNPP04156 253 aa19.41■□□□□ 0.7
TM6SF1-201ENST00000258909 ADRA1BP35368 520 aa19.41■□□□□ 0.7
TM6SF1-201ENST00000258909 ACVRL1P37023 503 aa19.41■□□□□ 0.7
TM6SF1-201ENST00000258909 RECQLP46063 649 aaPredicted RBP19.41■□□□□ 0.7
TM6SF1-201ENST00000258909 CLDN6P56747 220 aa19.41■□□□□ 0.7
TM6SF1-201ENST00000258909 RETSATQ6NUM9 610 aa19.41■□□□□ 0.7
TM6SF1-201ENST00000258909 SASS6Q6UVJ0 657 aa19.41■□□□□ 0.7
TM6SF1-201ENST00000258909 FZD3Q9NPG1 666 aa19.41■□□□□ 0.7
TM6SF1-201ENST00000258909 OR12D3Q9UGF7 316 aa19.41■□□□□ 0.7
TM6SF1-201ENST00000258909 DNAI1Q9UI46 699 aa19.41■□□□□ 0.7
TM6SF1-201ENST00000258909 TDRD6O60522 2096 aaKnown RBP19.41■□□□□ 0.7
TM6SF1-201ENST00000258909 COL5A1P20908 1838 aaPredicted RBP19.41■□□□□ 0.7
TM6SF1-201ENST00000258909 C2CD4BA6NLJ0 364 aa19.41■□□□□ 0.7
TM6SF1-201ENST00000258909 PRAMEF26H0Y7S4 382 aa19.41■□□□□ 0.7
TM6SF1-201ENST00000258909 ENC1O14682 589 aa19.41■□□□□ 0.7
TM6SF1-201ENST00000258909 SDC3O75056 442 aa19.41■□□□□ 0.7
TM6SF1-201ENST00000258909 PCDH8O95206 1070 aa19.41■□□□□ 0.7
TM6SF1-201ENST00000258909 UNGP13051 313 aaPredicted RBP19.41■□□□□ 0.7
TM6SF1-201ENST00000258909 SERPINH1P50454 418 aaKnown RBP19.41■□□□□ 0.7
TM6SF1-201ENST00000258909 PTP4A2Q12974 167 aa19.41■□□□□ 0.7
TM6SF1-201ENST00000258909 ARL13BQ3SXY8 428 aa19.41■□□□□ 0.7
TM6SF1-201ENST00000258909 ZNF783Q6ZMS7 281 aa19.41■□□□□ 0.7
TM6SF1-201ENST00000258909 ERN2Q76MJ5 926 aaKnown RBP19.41■□□□□ 0.7
TM6SF1-201ENST00000258909 GALNT15Q8N3T1 639 aa19.41■□□□□ 0.7
TM6SF1-201ENST00000258909 CCDC185Q8N715 623 aa19.41■□□□□ 0.7
TM6SF1-201ENST00000258909 NEK11Q8NG66 645 aa19.41■□□□□ 0.7
TM6SF1-201ENST00000258909 CAAP1Q9H8G2 361 aa19.41■□□□□ 0.7
TM6SF1-201ENST00000258909 ERVMER34-1Q9H9K5 563 aa19.41■□□□□ 0.7
TM6SF1-201ENST00000258909 SEPT11Q9NVA2 429 aaKnown RBP19.41■□□□□ 0.7
TM6SF1-201ENST00000258909 PPARGC1AQ9UBK2 798 aaKnown RBP19.41■□□□□ 0.7
TM6SF1-201ENST00000258909 LIMA1Q9UHB6 759 aaKnown RBP19.41■□□□□ 0.7
TM6SF1-201ENST00000258909 WASF2Q9Y6W5 498 aa19.41■□□□□ 0.7
TM6SF1-201ENST00000258909 TRPM6Q9BX84 2022 aa19.4■□□□□ 0.7
TM6SF1-201ENST00000258909 YKT6O15498 198 aa19.4■□□□□ 0.7
TM6SF1-201ENST00000258909 KRT3P12035 628 aa19.4■□□□□ 0.7
TM6SF1-201ENST00000258909 RFC1P35251 1148 aaPredicted RBP19.4■□□□□ 0.7
TM6SF1-201ENST00000258909 NUDT1P36639 197 aa19.4■□□□□ 0.7
TM6SF1-201ENST00000258909 NSFP46459 744 aaKnown RBP19.4■□□□□ 0.7
TM6SF1-201ENST00000258909 RXRGP48443 463 aa19.4■□□□□ 0.7
TM6SF1-201ENST00000258909 UBXN1Q04323 297 aa19.4■□□□□ 0.7
TM6SF1-201ENST00000258909 SMAD1Q15797 465 aaKnown RBP19.4■□□□□ 0.7
TM6SF1-201ENST00000258909 ZNF284Q2VY69 593 aa19.4■□□□□ 0.7
TM6SF1-201ENST00000258909 SEL1L3Q68CR1 1132 aa19.4■□□□□ 0.7
TM6SF1-201ENST00000258909 TRIM72Q6ZMU5 477 aa19.4■□□□□ 0.7
TM6SF1-201ENST00000258909 LEKR1Q6ZMV7 388 aa19.4■□□□□ 0.7
TM6SF1-201ENST00000258909 IQCHQ86VS3 1027 aa19.4■□□□□ 0.7
TM6SF1-201ENST00000258909 FAM172AQ8WUF8 416 aa19.4■□□□□ 0.7
TM6SF1-201ENST00000258909 KLHDC7BQ96G42 594 aa19.4■□□□□ 0.7
TM6SF1-201ENST00000258909 GBP4Q96PP9 640 aa19.4■□□□□ 0.7
TM6SF1-201ENST00000258909 TM6SF2Q9BZW4 377 aa19.4■□□□□ 0.7
TM6SF1-201ENST00000258909 ANO10Q9NW15 660 aa19.4■□□□□ 0.7
TM6SF1-201ENST00000258909 ADAM22Q9P0K1 906 aa19.4■□□□□ 0.7
TM6SF1-201ENST00000258909 ZFR2Q9UPR6 939 aaKnown RBP19.4■□□□□ 0.7
TM6SF1-201ENST00000258909 TRABD2BA6NFA1 517 aa19.39■□□□□ 0.69
TM6SF1-201ENST00000258909 LGALS16A8MUM7 142 aa19.39■□□□□ 0.69
TM6SF1-201ENST00000258909 CD160O95971 181 aa19.39■□□□□ 0.69
TM6SF1-201ENST00000258909 THEGLP0DJG4 465 aa19.39■□□□□ 0.69
TM6SF1-201ENST00000258909 GKP32189 559 aa19.39■□□□□ 0.69
TM6SF1-201ENST00000258909 PTPN9P43378 593 aa19.39■□□□□ 0.69
TM6SF1-201ENST00000258909 HDAC4P56524 1084 aa19.39■□□□□ 0.69
TM6SF1-201ENST00000258909 CLDN2P57739 230 aa19.39■□□□□ 0.69
TM6SF1-201ENST00000258909 MYL5Q02045 173 aa19.39■□□□□ 0.69
TM6SF1-201ENST00000258909 CLEC16AQ2KHT3 1053 aa19.39■□□□□ 0.69
TM6SF1-201ENST00000258909 CARD16Q5EG05 197 aa19.39■□□□□ 0.69
TM6SF1-201ENST00000258909 MANEALQ5VSG8 457 aa19.39■□□□□ 0.69
TM6SF1-201ENST00000258909 HORMAD1Q86X24 394 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms