RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 TNK2Q07912 1038 aa28.15■■■□□ 2.1
CCM2-201ENST00000258781 CAMK1Q14012 370 aa28.15■■■□□ 2.1
CCM2-201ENST00000258781 PLPP4Q5VZY2 271 aa28.15■■■□□ 2.1
CCM2-201ENST00000258781 SERBP1Q8NC51 408 aaKnown RBP eCLIP28.15■■■□□ 2.1
CCM2-201ENST00000258781 ZNF669Q96BR6 464 aaPredicted RBP28.15■■■□□ 2.1
CCM2-201ENST00000258781 CABS1Q96KC9 395 aa28.15■■■□□ 2.1
CCM2-201ENST00000258781 GRID1Q9ULK0 1009 aa28.15■■■□□ 2.1
CCM2-201ENST00000258781 SOX13Q9UN79 622 aa28.15■■■□□ 2.1
CCM2-201ENST00000258781 SSX2IPQ9Y2D8 614 aa28.15■■■□□ 2.1
CCM2-201ENST00000258781 COCHO43405 550 aa28.14■■■□□ 2.1
CCM2-201ENST00000258781 RAMP2O60895 175 aa28.14■■■□□ 2.1
CCM2-201ENST00000258781 SPATA31D3P0C874 917 aa28.14■■■□□ 2.1
CCM2-201ENST00000258781 SLC11A2P49281 568 aa28.14■■■□□ 2.1
CCM2-201ENST00000258781 HARS2P49590 506 aaKnown RBP28.14■■■□□ 2.1
CCM2-201ENST00000258781 CREMQ03060 361 aa28.14■■■□□ 2.1
CCM2-201ENST00000258781 ITIH4Q14624 930 aa28.14■■■□□ 2.1
CCM2-201ENST00000258781 TAF12Q16514 161 aa28.14■■■□□ 2.1
CCM2-201ENST00000258781 ANKRD20A4Q4UJ75 823 aa28.14■■■□□ 2.1
CCM2-201ENST00000258781 CERCAMQ5T4B2 595 aa28.14■■■□□ 2.1
CCM2-201ENST00000258781 SPATA31D4Q6ZUB0 917 aa28.14■■■□□ 2.1
CCM2-201ENST00000258781 YTHDF3Q7Z739 585 aaKnown RBP28.14■■■□□ 2.1
CCM2-201ENST00000258781 RASSF3Q86WH2 238 aa28.14■■■□□ 2.1
CCM2-201ENST00000258781 CCDC117Q8IWD4 279 aaPredicted RBP28.14■■■□□ 2.1
CCM2-201ENST00000258781 TCEAL8Q8IYN2 117 aa28.14■■■□□ 2.1
CCM2-201ENST00000258781 AZIN2Q96A70 460 aa28.14■■■□□ 2.1
CCM2-201ENST00000258781 FCRL3Q96P31 734 aaPredicted RBP28.14■■■□□ 2.1
CCM2-201ENST00000258781 ELAC2Q9BQ52 826 aaKnown RBP28.14■■■□□ 2.1
CCM2-201ENST00000258781 APOL2Q9BQE5 337 aa28.14■■■□□ 2.1
CCM2-201ENST00000258781 SP110Q9HB58 689 aa28.14■■■□□ 2.1
CCM2-201ENST00000258781 IRAK3Q9Y616 596 aa28.14■■■□□ 2.1
CCM2-201ENST00000258781 GOLGA6L7A0A1B0GV03 622 aa28.13■■■□□ 2.09
CCM2-201ENST00000258781 TGM5O43548 720 aa28.13■■■□□ 2.09
CCM2-201ENST00000258781 RFPL1O75677 317 aa28.13■■■□□ 2.09
CCM2-201ENST00000258781 PACS1Q6VY07 963 aa28.13■■■□□ 2.09
CCM2-201ENST00000258781 ANKS4BQ8N8V4 417 aa28.13■■■□□ 2.09
CCM2-201ENST00000258781 SLC25A51Q9H1U9 297 aa28.13■■■□□ 2.09
CCM2-201ENST00000258781 TLR9Q9NR96 1032 aa28.13■■■□□ 2.09
CCM2-201ENST00000258781 HMX2A2RU54 273 aa28.12■■■□□ 2.09
CCM2-201ENST00000258781 GRM6O15303 877 aa28.12■■■□□ 2.09
CCM2-201ENST00000258781 SNX3O60493 162 aa28.12■■■□□ 2.09
CCM2-201ENST00000258781 MT-CYBP00156 380 aaPredicted RBP28.12■■■□□ 2.09
CCM2-201ENST00000258781 ELF1P32519 619 aa28.12■■■□□ 2.09
CCM2-201ENST00000258781 ADRA1AP35348 466 aa28.12■■■□□ 2.09
CCM2-201ENST00000258781 BMPR2Q13873 1038 aa28.12■■■□□ 2.09
CCM2-201ENST00000258781 POLD3Q15054 466 aaPredicted RBP28.12■■■□□ 2.09
CCM2-201ENST00000258781 SRLQ86TD4 932 aa28.12■■■□□ 2.09
CCM2-201ENST00000258781 LGI2Q8N0V4 545 aa28.12■■■□□ 2.09
CCM2-201ENST00000258781 TEX26Q8N6G2 289 aa28.12■■■□□ 2.09
CCM2-201ENST00000258781 KLHL5Q96PQ7 755 aa28.12■■■□□ 2.09
CCM2-201ENST00000258781 ZFATQ9P243 1243 aa28.12■■■□□ 2.09
CCM2-201ENST00000258781 RRP15Q9Y3B9 282 aaKnown RBP28.12■■■□□ 2.09
CCM2-201ENST00000258781 ATG2AQ2TAZ0 1938 aa28.12■■■□□ 2.09
CCM2-201ENST00000258781 ZCWPW2A0A1B0GU75 182 aa28.12■■■□□ 2.09
CCM2-201ENST00000258781 C2orf71A6NGG8 1288 aa28.12■■■□□ 2.09
CCM2-201ENST00000258781 COPEO14579 308 aa28.12■■■□□ 2.09
CCM2-201ENST00000258781 PRRG1O14668 218 aa28.12■■■□□ 2.09
CCM2-201ENST00000258781 OAS1P00973 400 aaKnown RBP28.12■■■□□ 2.09
CCM2-201ENST00000258781 ADRA1DP25100 572 aa28.12■■■□□ 2.09
CCM2-201ENST00000258781 IRS1P35568 1242 aa28.12■■■□□ 2.09
CCM2-201ENST00000258781 IL10RBQ08334 325 aa28.12■■■□□ 2.09
CCM2-201ENST00000258781 MPP3Q13368 585 aa28.12■■■□□ 2.09
CCM2-201ENST00000258781 PLD1Q13393 1074 aa28.12■■■□□ 2.09
CCM2-201ENST00000258781 CES3Q6UWW8 571 aa28.12■■■□□ 2.09
CCM2-201ENST00000258781 IPMKQ8NFU5 416 aa28.12■■■□□ 2.09
CCM2-201ENST00000258781 NSMCE1Q8WV22 266 aa28.12■■■□□ 2.09
CCM2-201ENST00000258781 GRAMD1AQ96CP6 724 aa28.12■■■□□ 2.09
CCM2-201ENST00000258781 VPS11Q9H270 941 aa28.12■■■□□ 2.09
CCM2-201ENST00000258781 SLC17A7Q9P2U7 560 aa28.12■■■□□ 2.09
CCM2-201ENST00000258781 UXTQ9UBK9 157 aaPredicted RBP28.12■■■□□ 2.09
CCM2-201ENST00000258781 MIA3Q5JRA6 1907 aa28.12■■■□□ 2.09
CCM2-201ENST00000258781 J3KR12 359 aa28.11■■■□□ 2.09
CCM2-201ENST00000258781 ATP9BO43861 1147 aa28.11■■■□□ 2.09
CCM2-201ENST00000258781 DHRS4L1P0CG22 281 aa28.11■■■□□ 2.09
CCM2-201ENST00000258781 OR1E1P30953 314 aa28.11■■■□□ 2.09
CCM2-201ENST00000258781 SERINC3Q13530 473 aa28.11■■■□□ 2.09
CCM2-201ENST00000258781 FAM133BQ5BKY9 247 aaKnown RBP28.11■■■□□ 2.09
CCM2-201ENST00000258781 MARC1Q5VT66 337 aa28.11■■■□□ 2.09
CCM2-201ENST00000258781 CIR1Q86X95 450 aaPredicted RBP28.11■■■□□ 2.09
CCM2-201ENST00000258781 LRRC8CQ8TDW0 803 aa28.11■■■□□ 2.09
CCM2-201ENST00000258781 MYEOVQ96EZ4 313 aa28.11■■■□□ 2.09
CCM2-201ENST00000258781 FICDQ9BVA6 458 aa28.11■■■□□ 2.09
CCM2-201ENST00000258781 KIFC1Q9BW19 673 aa28.11■■■□□ 2.09
CCM2-201ENST00000258781 PBX4Q9BYU1 374 aa28.11■■■□□ 2.09
CCM2-201ENST00000258781 INSL5Q9Y5Q6 135 aa28.11■■■□□ 2.09
CCM2-201ENST00000258781 KIAA0754O94854 1291 aa28.1■■■□□ 2.09
CCM2-201ENST00000258781 TWF1Q12792 350 aa28.1■■■□□ 2.09
CCM2-201ENST00000258781 MROH9Q5TGP6 573 aa28.1■■■□□ 2.09
CCM2-201ENST00000258781 ARMC3Q5W041 872 aa28.1■■■□□ 2.09
CCM2-201ENST00000258781 MRPL43Q8N983 215 aaKnown RBP28.1■■■□□ 2.09
CCM2-201ENST00000258781 PSMG2Q969U7 264 aa28.1■■■□□ 2.09
CCM2-201ENST00000258781 CPNE1Q99829 537 aa28.1■■■□□ 2.09
CCM2-201ENST00000258781 MTCL1Q9Y4B5 1905 aaKnown RBP28.1■■■□□ 2.09
CCM2-201ENST00000258781 RB1P06400 928 aa28.1■■■□□ 2.09
CCM2-201ENST00000258781 ERVK-10P10266 1014 aa28.1■■■□□ 2.09
CCM2-201ENST00000258781 SLC6A4P31645 630 aa28.1■■■□□ 2.09
CCM2-201ENST00000258781 ETV4P43268 484 aa28.1■■■□□ 2.09
CCM2-201ENST00000258781 EPHB3P54753 998 aa28.1■■■□□ 2.09
CCM2-201ENST00000258781 UBE3AQ05086 875 aa28.1■■■□□ 2.09
CCM2-201ENST00000258781 IFT88Q13099 833 aa28.1■■■□□ 2.09
CCM2-201ENST00000258781 ZKSCAN8Q15776 578 aaPredicted RBP28.1■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms