RNA–Protein interactions for RNA: ENST00000254719.9

RPA1-201, Transcript of replication protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA1, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-201ENST00000254719 PRDM12Q9H4Q4 367 aa9.35□□□□□ -0.91
RPA1-201ENST00000254719 DCLRE1BQ9H816 532 aa9.35□□□□□ -0.91
RPA1-201ENST00000254719 LMCD1Q9NZU5 365 aa9.35□□□□□ -0.91
RPA1-201ENST00000254719 HACD3Q9P035 362 aa9.35□□□□□ -0.91
RPA1-201ENST00000254719 TNRC18O15417 2968 aaPredicted RBP9.34□□□□□ -0.91
RPA1-201ENST00000254719 MAGEB16A2A368 324 aa9.34□□□□□ -0.91
RPA1-201ENST00000254719 H3BNX3 289 aa9.34□□□□□ -0.91
RPA1-201ENST00000254719 TIMM44O43615 452 aa9.34□□□□□ -0.91
RPA1-201ENST00000254719 CYP2C9P11712 490 aa9.34□□□□□ -0.91
RPA1-201ENST00000254719 ACADSP16219 412 aa9.34□□□□□ -0.91
RPA1-201ENST00000254719 ADRA1AP35348 466 aa9.34□□□□□ -0.91
RPA1-201ENST00000254719 BST2Q10589 180 aaKnown RBP9.34□□□□□ -0.91
RPA1-201ENST00000254719 SEPT6Q14141 434 aa9.34□□□□□ -0.91
RPA1-201ENST00000254719 UBAP2LQ14157 1087 aaKnown RBP9.34□□□□□ -0.91
RPA1-201ENST00000254719 LRRC8BQ6P9F7 803 aa9.34□□□□□ -0.91
RPA1-201ENST00000254719 CENPLQ8N0S6 344 aaPredicted RBP9.34□□□□□ -0.91
RPA1-201ENST00000254719 HIPK4Q8NE63 616 aa9.34□□□□□ -0.91
RPA1-201ENST00000254719 URGCPQ8TCY9 931 aa9.34□□□□□ -0.91
RPA1-201ENST00000254719 ABHD16BQ9H3Z7 469 aa9.34□□□□□ -0.91
RPA1-201ENST00000254719 CATSPERBQ9H7T0 1116 aa9.34□□□□□ -0.91
RPA1-201ENST00000254719 HBS1LQ9Y450 684 aaKnown RBP9.34□□□□□ -0.91
RPA1-201ENST00000254719 TIMM13Q9Y5L4 95 aaPredicted RBP9.34□□□□□ -0.91
RPA1-201ENST00000254719 SLCO1B7G3V0H7 640 aa9.34□□□□□ -0.91
RPA1-201ENST00000254719 ZBTB24O43167 697 aaPredicted RBP9.34□□□□□ -0.91
RPA1-201ENST00000254719 CYP2B6P20813 491 aa9.34□□□□□ -0.91
RPA1-201ENST00000254719 PAX3P23760 479 aa9.34□□□□□ -0.91
RPA1-201ENST00000254719 NFKBIAP25963 317 aa9.34□□□□□ -0.91
RPA1-201ENST00000254719 PTPN4P29074 926 aa9.34□□□□□ -0.91
RPA1-201ENST00000254719 PMLP29590 882 aa9.34□□□□□ -0.91
RPA1-201ENST00000254719 ABCG1P45844 678 aa9.34□□□□□ -0.91
RPA1-201ENST00000254719 DAOAP59103 153 aa9.34□□□□□ -0.91
RPA1-201ENST00000254719 KLC1Q07866 573 aa9.34□□□□□ -0.91
RPA1-201ENST00000254719 ZNF789Q5FWF6 425 aa9.34□□□□□ -0.91
RPA1-201ENST00000254719 BTBD8Q5XKL5 378 aa9.34□□□□□ -0.91
RPA1-201ENST00000254719 TMEM207Q6UWW9 146 aa9.34□□□□□ -0.91
RPA1-201ENST00000254719 CMC1Q7Z7K0 106 aa9.34□□□□□ -0.91
RPA1-201ENST00000254719 SCD5Q86SK9 330 aa9.34□□□□□ -0.91
RPA1-201ENST00000254719 PHTF2Q8N3S3 785 aa9.34□□□□□ -0.91
RPA1-201ENST00000254719 SCAMP5Q8TAC9 235 aa9.34□□□□□ -0.91
RPA1-201ENST00000254719 MIPOL1Q8TD10 442 aa9.34□□□□□ -0.91
RPA1-201ENST00000254719 SH3TC2Q8TF17 1288 aa9.34□□□□□ -0.91
RPA1-201ENST00000254719 MFSD3Q96ES6 412 aa9.34□□□□□ -0.91
RPA1-201ENST00000254719 SF3B1O75533 1304 aaKnown RBP eCLIP9.34□□□□□ -0.914e-6■■■■■ 69
RPA1-201ENST00000254719 NOTCH4Q99466 2003 aa9.34□□□□□ -0.91
RPA1-201ENST00000254719 ANXA9O76027 345 aa9.34□□□□□ -0.91
RPA1-201ENST00000254719 FAM200BP0CF97 657 aa9.34□□□□□ -0.91
RPA1-201ENST00000254719 TIGD5Q53EQ6 642 aa9.34□□□□□ -0.91
RPA1-201ENST00000254719 MROH9Q5TGP6 573 aa9.34□□□□□ -0.91
RPA1-201ENST00000254719 ZNF280DQ6N043 979 aa9.34□□□□□ -0.91
RPA1-201ENST00000254719 PACS1Q6VY07 963 aa9.34□□□□□ -0.91
RPA1-201ENST00000254719 ZNF513Q8N8E2 541 aaPredicted RBP9.34□□□□□ -0.91
RPA1-201ENST00000254719 HTR3CQ8WXA8 447 aa9.34□□□□□ -0.91
RPA1-201ENST00000254719 CRISPLD1Q9H336 500 aa9.34□□□□□ -0.91
RPA1-201ENST00000254719 MMADHCQ9H3L0 296 aaPredicted RBP9.34□□□□□ -0.91
RPA1-201ENST00000254719 CAB39LQ9H9S4 337 aa9.34□□□□□ -0.91
RPA1-201ENST00000254719 CASS4Q9NQ75 786 aa9.34□□□□□ -0.91
RPA1-201ENST00000254719 SORCS3Q9UPU3 1222 aa9.34□□□□□ -0.91
RPA1-201ENST00000254719 CCL15-CCL14A0A0B4J2E2 113 aa9.33□□□□□ -0.92
RPA1-201ENST00000254719 KPNA6O60684 536 aa9.33□□□□□ -0.92
RPA1-201ENST00000254719 EFEMP2O95967 443 aa9.33□□□□□ -0.92
RPA1-201ENST00000254719 CAPNS1P04632 268 aa9.33□□□□□ -0.92
RPA1-201ENST00000254719 ERVK-10P10266 1014 aa9.33□□□□□ -0.92
RPA1-201ENST00000254719 FUT4P22083 530 aa9.33□□□□□ -0.92
RPA1-201ENST00000254719 MGAT1P26572 445 aa9.33□□□□□ -0.92
RPA1-201ENST00000254719 HOXC13P31276 330 aa9.33□□□□□ -0.92
RPA1-201ENST00000254719 CPT1AP50416 773 aa9.33□□□□□ -0.92
RPA1-201ENST00000254719 SESN2P58004 480 aaPredicted RBP9.33□□□□□ -0.92
RPA1-201ENST00000254719 BLMHQ13867 455 aa9.33□□□□□ -0.92
RPA1-201ENST00000254719 CCL15Q16663 113 aa9.33□□□□□ -0.92
RPA1-201ENST00000254719 SETMARQ53H47 684 aaPredicted RBP9.33□□□□□ -0.92
RPA1-201ENST00000254719 MFSD14CQ5VZR4 134 aa9.33□□□□□ -0.92
RPA1-201ENST00000254719 IQSEC1Q6DN90 963 aa9.33□□□□□ -0.92
RPA1-201ENST00000254719 C16orf89Q6UX73 402 aa9.33□□□□□ -0.92
RPA1-201ENST00000254719 CEP97Q8IW35 865 aa9.33□□□□□ -0.92
RPA1-201ENST00000254719 EFCAB3Q8N7B9 438 aa9.33□□□□□ -0.92
RPA1-201ENST00000254719 RBM15BQ8NDT2 890 aaKnown RBP9.33□□□□□ -0.92
RPA1-201ENST00000254719 EZH1Q92800 747 aaPredicted RBP9.33□□□□□ -0.92
RPA1-201ENST00000254719 FAR2Q96K12 515 aa9.33□□□□□ -0.92
RPA1-201ENST00000254719 OSBPL2Q9H1P3 480 aa9.33□□□□□ -0.92
RPA1-201ENST00000254719 LRRC40Q9H9A6 602 aa9.33□□□□□ -0.92
RPA1-201ENST00000254719 ATP13A1Q9HD20 1204 aa9.33□□□□□ -0.92
RPA1-201ENST00000254719 PCDH10Q9P2E7 1040 aa9.33□□□□□ -0.92
RPA1-201ENST00000254719 PLIN3O60664 434 aa9.33□□□□□ -0.92
RPA1-201ENST00000254719 KRT36O76013 467 aa9.33□□□□□ -0.92
RPA1-201ENST00000254719 KCNC1P48547 511 aa9.33□□□□□ -0.92
RPA1-201ENST00000254719 PTDSS1P48651 473 aaKnown RBP9.33□□□□□ -0.92
RPA1-201ENST00000254719 MFSD10Q14728 455 aa9.33□□□□□ -0.92
RPA1-201ENST00000254719 RARS2Q5T160 578 aaKnown RBP9.33□□□□□ -0.92
RPA1-201ENST00000254719 RNPEPL1Q9HAU8 725 aa9.33□□□□□ -0.92
RPA1-201ENST00000254719 CPA4Q9UI42 421 aa9.33□□□□□ -0.92
RPA1-201ENST00000254719 FBXW11Q9UKB1 542 aa9.33□□□□□ -0.92
RPA1-201ENST00000254719 A0A0A0MRY4 1105 aa9.33□□□□□ -0.92
RPA1-201ENST00000254719 KLHL33A6NCF5 533 aa9.33□□□□□ -0.92
RPA1-201ENST00000254719 KCNK1O00180 336 aa9.33□□□□□ -0.92
RPA1-201ENST00000254719 TPP1O14773 563 aa9.33□□□□□ -0.92
RPA1-201ENST00000254719 ADAMTS4O75173 837 aa9.33□□□□□ -0.92
RPA1-201ENST00000254719 MYL2P10916 166 aa9.33□□□□□ -0.92
RPA1-201ENST00000254719 VHLP40337 213 aa9.33□□□□□ -0.92
RPA1-201ENST00000254719 MLH1P40692 756 aa9.33□□□□□ -0.92
RPA1-201ENST00000254719 MTA1Q13330 715 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms