RNA–Protein interactions for RNA: ENST00000250489.8

TMEM55B-201, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-201ENST00000250489 NDST2P52849 883 aa25.58■■□□□ 1.69
TMEM55B-201ENST00000250489 TRIP4Q15650 581 aaPredicted RBP25.58■■□□□ 1.69
TMEM55B-201ENST00000250489 PSMD5Q16401 504 aa25.58■■□□□ 1.69
TMEM55B-201ENST00000250489 PPHLN1Q8NEY8 458 aaKnown RBP25.58■■□□□ 1.69
TMEM55B-201ENST00000250489 SIKE1Q9BRV8 207 aa25.58■■□□□ 1.69
TMEM55B-201ENST00000250489 MTPAPQ9NVV4 582 aaKnown RBP eCLIP25.58■■□□□ 1.69
TMEM55B-201ENST00000250489 CCDC22O60826 627 aa25.57■■□□□ 1.68
TMEM55B-201ENST00000250489 PMPCBO75439 489 aa25.57■■□□□ 1.68
TMEM55B-201ENST00000250489 RTN3O95197 1032 aaPredicted RBP25.57■■□□□ 1.68
TMEM55B-201ENST00000250489 TBX18O95935 607 aa25.57■■□□□ 1.68
TMEM55B-201ENST00000250489 C2P06681 752 aa25.57■■□□□ 1.68
TMEM55B-201ENST00000250489 CPA3P15088 417 aa25.57■■□□□ 1.68
TMEM55B-201ENST00000250489 SLC11A1P49279 550 aa25.57■■□□□ 1.68
TMEM55B-201ENST00000250489 CDK7P50613 346 aa25.57■■□□□ 1.68
TMEM55B-201ENST00000250489 IRF9Q00978 393 aa25.57■■□□□ 1.68
TMEM55B-201ENST00000250489 DEFB115Q30KQ5 88 aa25.57■■□□□ 1.68
TMEM55B-201ENST00000250489 POTEHQ6S545 545 aa25.57■■□□□ 1.68
TMEM55B-201ENST00000250489 TFAP2DQ7Z6R9 452 aa25.57■■□□□ 1.68
TMEM55B-201ENST00000250489 ATP6V0D2Q8N8Y2 350 aa25.57■■□□□ 1.68
TMEM55B-201ENST00000250489 MRGPRX2Q96LB1 330 aa25.57■■□□□ 1.68
TMEM55B-201ENST00000250489 GPR22Q99680 433 aa25.57■■□□□ 1.68
TMEM55B-201ENST00000250489 MIPEPQ99797 713 aa25.57■■□□□ 1.68
TMEM55B-201ENST00000250489 TMEM248Q9NWD8 314 aa25.57■■□□□ 1.68
TMEM55B-201ENST00000250489 HCSTQ9UBK5 93 aa25.57■■□□□ 1.68
TMEM55B-201ENST00000250489 DNAJC16Q9Y2G8 782 aa25.57■■□□□ 1.68
TMEM55B-201ENST00000250489 SLC27A5Q9Y2P5 690 aa25.57■■□□□ 1.68
TMEM55B-201ENST00000250489 MTMR11A4FU01 709 aa25.56■■□□□ 1.68
TMEM55B-201ENST00000250489 NEBLO76041 1014 aa25.56■■□□□ 1.68
TMEM55B-201ENST00000250489 ALDH2P05091 517 aa25.56■■□□□ 1.68
TMEM55B-201ENST00000250489 CPB1P15086 417 aa25.56■■□□□ 1.68
TMEM55B-201ENST00000250489 CALB2P22676 271 aa25.56■■□□□ 1.68
TMEM55B-201ENST00000250489 HADHAP40939 763 aa25.56■■□□□ 1.68
TMEM55B-201ENST00000250489 CSRP3P50461 194 aa25.56■■□□□ 1.68
TMEM55B-201ENST00000250489 GRM3Q14832 879 aa25.56■■□□□ 1.68
TMEM55B-201ENST00000250489 ZC3HC1Q86WB0 502 aaKnown RBP25.56■■□□□ 1.68
TMEM55B-201ENST00000250489 FAM13CQ8NE31 585 aa25.56■■□□□ 1.68
TMEM55B-201ENST00000250489 PIWIL2Q8TC59 973 aaKnown RBP25.56■■□□□ 1.68
TMEM55B-201ENST00000250489 PTCD2Q8WV60 388 aaKnown RBP25.56■■□□□ 1.68
TMEM55B-201ENST00000250489 FSD1LQ9BXM9 530 aa25.56■■□□□ 1.68
TMEM55B-201ENST00000250489 CRISPLD1Q9H336 500 aa25.56■■□□□ 1.68
TMEM55B-201ENST00000250489 RHOJQ9H4E5 214 aa25.56■■□□□ 1.68
TMEM55B-201ENST00000250489 MRM3Q9HC36 420 aaKnown RBP25.56■■□□□ 1.68
TMEM55B-201ENST00000250489 GPBP1L1Q9HC44 474 aaPredicted RBP25.56■■□□□ 1.68
TMEM55B-201ENST00000250489 OLA1Q9NTK5 396 aaKnown RBP25.56■■□□□ 1.68
TMEM55B-201ENST00000250489 ARMCX1Q9P291 453 aa25.56■■□□□ 1.68
TMEM55B-201ENST00000250489 TCAF1Q9Y4C2 921 aa25.56■■□□□ 1.68
TMEM55B-201ENST00000250489 IGLV3-10A0A075B6K4 115 aa25.56■■□□□ 1.68
TMEM55B-201ENST00000250489 CNTN5O94779 1100 aa25.56■■□□□ 1.68
TMEM55B-201ENST00000250489 VNN2O95498 520 aa25.56■■□□□ 1.68
TMEM55B-201ENST00000250489 ATP5BP06576 529 aaKnown RBP25.56■■□□□ 1.68
TMEM55B-201ENST00000250489 RALBP11234 206 aa25.56■■□□□ 1.68
TMEM55B-201ENST00000250489 TAF10Q12962 218 aa25.56■■□□□ 1.68
TMEM55B-201ENST00000250489 ALFQ53S48 1182 aa25.56■■□□□ 1.68
TMEM55B-201ENST00000250489 RSPO2Q6UXX9 243 aaPredicted RBP25.56■■□□□ 1.68
TMEM55B-201ENST00000250489 RANBP10Q6VN20 620 aa25.56■■□□□ 1.68
TMEM55B-201ENST00000250489 CNTN4Q8IWV2 1026 aa25.56■■□□□ 1.68
TMEM55B-201ENST00000250489 OR6Y1Q8NGX8 325 aa25.56■■□□□ 1.68
TMEM55B-201ENST00000250489 FATE1Q969F0 183 aa25.56■■□□□ 1.68
TMEM55B-201ENST00000250489 HMCESQ96FZ2 354 aa25.56■■□□□ 1.68
TMEM55B-201ENST00000250489 BTN2A3PQ96KV6 586 aa25.56■■□□□ 1.68
TMEM55B-201ENST00000250489 BTBD10Q9BSF8 475 aa25.56■■□□□ 1.68
TMEM55B-201ENST00000250489 MYLKQ15746 1914 aa25.55■■□□□ 1.68
TMEM55B-201ENST00000250489 PSEN1P49768 467 aa25.55■■□□□ 1.68
TMEM55B-201ENST00000250489 GPR17Q13304 367 aa25.55■■□□□ 1.68
TMEM55B-201ENST00000250489 BFSP2Q13515 415 aa25.55■■□□□ 1.68
TMEM55B-201ENST00000250489 HNRNPDQ14103 355 aaKnown RBP25.55■■□□□ 1.68
TMEM55B-201ENST00000250489 FUT10Q6P4F1 479 aa25.55■■□□□ 1.68
TMEM55B-201ENST00000250489 ATG14Q6ZNE5 492 aa25.55■■□□□ 1.68
TMEM55B-201ENST00000250489 WDR75Q8IWA0 830 aaKnown RBP25.55■■□□□ 1.68
TMEM55B-201ENST00000250489 SPPL2BQ8TCT7 592 aa25.55■■□□□ 1.68
TMEM55B-201ENST00000250489 SORT1Q99523 831 aa25.55■■□□□ 1.68
TMEM55B-201ENST00000250489 SLC25A51Q9H1U9 297 aa25.55■■□□□ 1.68
TMEM55B-201ENST00000250489 TLR8Q9NR97 1041 aaKnown RBP25.55■■□□□ 1.68
TMEM55B-201ENST00000250489 MARCH2Q9P0N8 246 aa25.55■■□□□ 1.68
TMEM55B-201ENST00000250489 SLC39A10Q9ULF5 831 aa25.55■■□□□ 1.68
TMEM55B-201ENST00000250489 CAPN14A8MX76 684 aa25.55■■□□□ 1.68
TMEM55B-201ENST00000250489 GNRH1P01148 92 aa25.55■■□□□ 1.68
TMEM55B-201ENST00000250489 CCND1P24385 295 aa25.55■■□□□ 1.68
TMEM55B-201ENST00000250489 ARCN1P48444 511 aaKnown RBP25.55■■□□□ 1.68
TMEM55B-201ENST00000250489 E2F5Q15329 346 aa25.55■■□□□ 1.68
TMEM55B-201ENST00000250489 MGAT5BQ3V5L5 792 aa25.55■■□□□ 1.68
TMEM55B-201ENST00000250489 RASIP1Q5U651 963 aa25.55■■□□□ 1.68
TMEM55B-201ENST00000250489 ESRP1Q6NXG1 681 aaKnown RBP25.55■■□□□ 1.68
TMEM55B-201ENST00000250489 KDELC1Q6UW63 502 aa25.55■■□□□ 1.68
TMEM55B-201ENST00000250489 RNF19BQ6ZMZ0 732 aa25.55■■□□□ 1.68
TMEM55B-201ENST00000250489 MIB1Q86YT6 1006 aa25.55■■□□□ 1.68
TMEM55B-201ENST00000250489 FAM126BQ8IXS8 530 aa25.55■■□□□ 1.68
TMEM55B-201ENST00000250489 TNS4Q8IZW8 715 aa25.55■■□□□ 1.68
TMEM55B-201ENST00000250489 SLAIN1Q8ND83 568 aa25.55■■□□□ 1.68
TMEM55B-201ENST00000250489 SPATA17Q96L03 361 aa25.55■■□□□ 1.68
TMEM55B-201ENST00000250489 SEPT5Q99719 369 aaPredicted RBP25.55■■□□□ 1.68
TMEM55B-201ENST00000250489 EBF4Q9BQW3 602 aa25.55■■□□□ 1.68
TMEM55B-201ENST00000250489 DOCK4Q8N1I0 1966 aa25.54■■□□□ 1.68
TMEM55B-201ENST00000250489 TBC1D4O60343 1298 aa25.54■■□□□ 1.68
TMEM55B-201ENST00000250489 HAPLN1P10915 354 aaPredicted RBP25.54■■□□□ 1.68
TMEM55B-201ENST00000250489 ESRRAP11474 423 aaPredicted RBP25.54■■□□□ 1.68
TMEM55B-201ENST00000250489 ARNTP27540 789 aa25.54■■□□□ 1.68
TMEM55B-201ENST00000250489 GABRB3P28472 473 aa25.54■■□□□ 1.68
TMEM55B-201ENST00000250489 ARRB2P32121 409 aa25.54■■□□□ 1.68
TMEM55B-201ENST00000250489 ITGA9Q13797 1035 aa25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms