RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 SPOCK2Q92563 424 aa20.1■□□□□ 0.81
SOX4-201ENST00000244745 COPS5Q92905 334 aa20.1■□□□□ 0.81
SOX4-201ENST00000244745 ASB2Q96Q27 587 aa20.1■□□□□ 0.81
SOX4-201ENST00000244745 TRPM5Q9NZQ8 1165 aa20.1■□□□□ 0.81
SOX4-201ENST00000244745 PADI4Q9UM07 663 aa20.1■□□□□ 0.81
SOX4-201ENST00000244745 SNX8Q9Y5X2 465 aa20.1■□□□□ 0.81
SOX4-201ENST00000244745 CAMK2GQ13555 558 aaPredicted RBP20.1■□□□□ 0.81
SOX4-201ENST00000244745 CDH19Q9H159 772 aa20.1■□□□□ 0.81
SOX4-201ENST00000244745 C12orf65Q9H3J6 166 aaKnown RBP20.1■□□□□ 0.81
SOX4-201ENST00000244745 FAM50BQ9Y247 325 aa20.1■□□□□ 0.81
SOX4-201ENST00000244745 GSC2O15499 205 aa20.1■□□□□ 0.81
SOX4-201ENST00000244745 CYP1A1P04798 512 aaPredicted RBP20.1■□□□□ 0.81
SOX4-201ENST00000244745 PTPN1P18031 435 aaKnown RBP20.1■□□□□ 0.81
SOX4-201ENST00000244745 EPHA3P29320 983 aa20.1■□□□□ 0.81
SOX4-201ENST00000244745 PDZK1Q5T2W1 519 aa20.1■□□□□ 0.81
SOX4-201ENST00000244745 CAMK1DQ8IU85 385 aa20.1■□□□□ 0.81
SOX4-201ENST00000244745 KLHL23Q8NBE8 558 aa20.1■□□□□ 0.81
SOX4-201ENST00000244745 TNFSF13BQ9Y275 285 aa20.1■□□□□ 0.81
SOX4-201ENST00000244745 IPPQ9Y573 584 aa20.1■□□□□ 0.81
SOX4-201ENST00000244745 C3P01024 1663 aa20.1■□□□□ 0.81
SOX4-201ENST00000244745 PIK3R1P27986 724 aa20.1■□□□□ 0.81
SOX4-201ENST00000244745 CELF3Q5SZQ8 465 aaKnown RBP20.1■□□□□ 0.81
SOX4-201ENST00000244745 GPR107Q5VW38 600 aa20.1■□□□□ 0.81
SOX4-201ENST00000244745 NUDT18Q6ZVK8 323 aa20.1■□□□□ 0.81
SOX4-201ENST00000244745 HDDC2Q7Z4H3 204 aa20.1■□□□□ 0.81
SOX4-201ENST00000244745 FBXO30Q8TB52 745 aa20.1■□□□□ 0.81
SOX4-201ENST00000244745 ACMSDQ8TDX5 336 aa20.1■□□□□ 0.81
SOX4-201ENST00000244745 DGCR14Q96DF8 476 aaKnown RBP20.1■□□□□ 0.81
SOX4-201ENST00000244745 PPP2R3BQ9Y5P8 575 aa20.1■□□□□ 0.81
SOX4-201ENST00000244745 HUNKP57058 714 aa20.1■□□□□ 0.81
SOX4-201ENST00000244745 ZNF280DQ6N043 979 aa20.1■□□□□ 0.81
SOX4-201ENST00000244745 RNF180Q86T96 592 aa20.1■□□□□ 0.81
SOX4-201ENST00000244745 C8orf59Q8N0T1 100 aaPredicted RBP20.1■□□□□ 0.81
SOX4-201ENST00000244745 LGI2Q8N0V4 545 aa20.1■□□□□ 0.81
SOX4-201ENST00000244745 C12orf29Q8N999 325 aa20.1■□□□□ 0.81
SOX4-201ENST00000244745 APOL4Q9BPW4 351 aa20.1■□□□□ 0.81
SOX4-201ENST00000244745 CDT1Q9H211 546 aa20.1■□□□□ 0.81
SOX4-201ENST00000244745 ATP13A1Q9HD20 1204 aa20.1■□□□□ 0.81
SOX4-201ENST00000244745 MTF2Q9Y483 593 aaPredicted RBP20.1■□□□□ 0.81
SOX4-201ENST00000244745 NFASCO94856 1347 aa20.1■□□□□ 0.81
SOX4-201ENST00000244745 TMEM191CA6NGB0 347 aa20.09■□□□□ 0.81
SOX4-201ENST00000244745 IFNA14P01570 189 aa20.09■□□□□ 0.81
SOX4-201ENST00000244745 TTKP33981 857 aa20.09■□□□□ 0.81
SOX4-201ENST00000244745 FASTKD3Q14CZ7 662 aaKnown RBP20.09■□□□□ 0.81
SOX4-201ENST00000244745 ZDHHC13Q8IUH4 622 aa20.09■□□□□ 0.81
SOX4-201ENST00000244745 FITM2Q8N6M3 262 aa20.09■□□□□ 0.81
SOX4-201ENST00000244745 RP9Q8TA86 221 aaKnown RBP20.09■□□□□ 0.81
SOX4-201ENST00000244745 PRDM16Q9HAZ2 1276 aa20.09■□□□□ 0.81
SOX4-201ENST00000244745 SPAG4Q9NPE6 437 aa20.09■□□□□ 0.81
SOX4-201ENST00000244745 ADARB2Q9NS39 739 aaKnown RBP20.09■□□□□ 0.81
SOX4-201ENST00000244745 EURLQ9NYK6 297 aa20.09■□□□□ 0.81
SOX4-201ENST00000244745 PCDHB5Q9Y5E4 795 aa20.09■□□□□ 0.81
SOX4-201ENST00000244745 ADCYAP1R1P41586 468 aa20.09■□□□□ 0.81
SOX4-201ENST00000244745 CD86P42081 329 aa20.09■□□□□ 0.81
SOX4-201ENST00000244745 KPNA1P52294 538 aaPredicted RBP20.09■□□□□ 0.81
SOX4-201ENST00000244745 NCF4Q15080 339 aa20.09■□□□□ 0.81
SOX4-201ENST00000244745 GPSM1Q86YR5 675 aa20.09■□□□□ 0.81
SOX4-201ENST00000244745 TMEM132CQ8N3T6 1108 aa20.09■□□□□ 0.81
SOX4-201ENST00000244745 SETD9Q8NE22 299 aa20.09■□□□□ 0.81
SOX4-201ENST00000244745 FBXO44Q9H4M3 255 aa20.09■□□□□ 0.81
SOX4-201ENST00000244745 CAB39LQ9H9S4 337 aa20.09■□□□□ 0.81
SOX4-201ENST00000244745 SH3BP4Q9P0V3 963 aa20.09■□□□□ 0.81
SOX4-201ENST00000244745 C15orf38-AP3S2A0A0A6YYH1 394 aa20.09■□□□□ 0.81
SOX4-201ENST00000244745 PAPSS1O43252 624 aaPredicted RBP20.09■□□□□ 0.81
SOX4-201ENST00000244745 CBFA2T3O75081 653 aa20.09■□□□□ 0.81
SOX4-201ENST00000244745 AXLP30530 894 aa20.09■□□□□ 0.81
SOX4-201ENST00000244745 KRT20P35900 424 aa20.09■□□□□ 0.81
SOX4-201ENST00000244745 SLC39A12Q504Y0 691 aa20.09■□□□□ 0.81
SOX4-201ENST00000244745 ARPINQ7Z6K5 226 aa20.09■□□□□ 0.81
SOX4-201ENST00000244745 KBTBD2Q8IY47 623 aa20.09■□□□□ 0.81
SOX4-201ENST00000244745 PPP1R13LQ8WUF5 828 aa20.09■□□□□ 0.81
SOX4-201ENST00000244745 INVSQ9Y283 1065 aa20.09■□□□□ 0.81
SOX4-201ENST00000244745 MON2Q7Z3U7 1717 aa20.09■□□□□ 0.81
SOX4-201ENST00000244745 FAM25AB3EWG3 89 aa20.09■□□□□ 0.81
SOX4-201ENST00000244745 FAM25CB3EWG5 89 aa20.09■□□□□ 0.81
SOX4-201ENST00000244745 FAM25GB3EWG6 89 aa20.09■□□□□ 0.81
SOX4-201ENST00000244745 HIRAP54198 1017 aaPredicted RBP20.09■□□□□ 0.81
SOX4-201ENST00000244745 XIAPP98170 497 aa20.09■□□□□ 0.81
SOX4-201ENST00000244745 TRIQKQ629K1 86 aa20.09■□□□□ 0.81
SOX4-201ENST00000244745 WSCD1Q658N2 575 aa20.09■□□□□ 0.81
SOX4-201ENST00000244745 PACS1Q6VY07 963 aa20.09■□□□□ 0.81
SOX4-201ENST00000244745 STN1Q9H668 368 aaKnown RBP20.09■□□□□ 0.81
SOX4-201ENST00000244745 PNPLA3Q9NST1 481 aa20.09■□□□□ 0.81
SOX4-201ENST00000244745 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.09■□□□□ 0.81
SOX4-201ENST00000244745 RAP2CQ9Y3L5 183 aa20.09■□□□□ 0.81
SOX4-201ENST00000244745 SNTNA6NMZ2 147 aa20.09■□□□□ 0.81
SOX4-201ENST00000244745 KCNH1O95259 989 aa20.09■□□□□ 0.81
SOX4-201ENST00000244745 GSTM1P09488 218 aa20.09■□□□□ 0.81
SOX4-201ENST00000244745 LBPP18428 481 aa20.09■□□□□ 0.81
SOX4-201ENST00000244745 DNAJB2P25686 324 aa20.09■□□□□ 0.81
SOX4-201ENST00000244745 ADORA2AP29274 412 aa20.09■□□□□ 0.81
SOX4-201ENST00000244745 USP4Q13107 963 aa20.09■□□□□ 0.81
SOX4-201ENST00000244745 CCDC149Q6ZUS6 474 aa20.09■□□□□ 0.81
SOX4-201ENST00000244745 KIAA0319LQ8IZA0 1049 aa20.09■□□□□ 0.81
SOX4-201ENST00000244745 CPA4Q9UI42 421 aa20.09■□□□□ 0.81
SOX4-201ENST00000244745 KLHL20Q9Y2M5 609 aa20.09■□□□□ 0.81
SOX4-201ENST00000244745 DLG5Q8TDM6 1919 aa20.09■□□□□ 0.81
SOX4-201ENST00000244745 NID2Q14112 1375 aa20.08■□□□□ 0.81
SOX4-201ENST00000244745 B4GALT5O43286 388 aa20.08■□□□□ 0.81
SOX4-201ENST00000244745 GJB1P08034 283 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms