RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 STRA8Q7Z7C7 330 aa23.64■■□□□ 1.38
MSX2-201ENST00000239243 ZNF354CQ86Y25 554 aa23.64■■□□□ 1.38
MSX2-201ENST00000239243 IL1RAPL1Q9NZN1 696 aa23.64■■□□□ 1.38
MSX2-201ENST00000239243 ZNF212Q9UDV6 495 aa23.64■■□□□ 1.38
MSX2-201ENST00000239243 TIMM44O43615 452 aa23.64■■□□□ 1.37
MSX2-201ENST00000239243 OR1E1P30953 314 aa23.64■■□□□ 1.37
MSX2-201ENST00000239243 SLC11A2P49281 568 aa23.64■■□□□ 1.37
MSX2-201ENST00000239243 HARS2P49590 506 aaKnown RBP23.64■■□□□ 1.37
MSX2-201ENST00000239243 HSP90AA5PQ58FG0 334 aa23.64■■□□□ 1.37
MSX2-201ENST00000239243 PTPRN2Q92932 1015 aa23.64■■□□□ 1.37
MSX2-201ENST00000239243 ISL2Q96A47 359 aa23.64■■□□□ 1.37
MSX2-201ENST00000239243 ZNF689Q96CS4 500 aaPredicted RBP23.64■■□□□ 1.37
MSX2-201ENST00000239243 HERC2P3Q9BVR0 1158 aa23.64■■□□□ 1.37
MSX2-201ENST00000239243 ALG13Q9NP73 1137 aaKnown RBP23.64■■□□□ 1.37
MSX2-201ENST00000239243 MRPL42Q9Y6G3 142 aaKnown RBP23.64■■□□□ 1.37
MSX2-201ENST00000239243 COL4A6Q14031 1691 aa23.63■■□□□ 1.37
MSX2-201ENST00000239243 LTBP2Q14767 1821 aa23.63■■□□□ 1.37
MSX2-201ENST00000239243 EFCAB14O75071 495 aa23.63■■□□□ 1.37
MSX2-201ENST00000239243 DCTN3O75935 186 aa23.63■■□□□ 1.37
MSX2-201ENST00000239243 TGDSO95455 350 aa23.63■■□□□ 1.37
MSX2-201ENST00000239243 BGNP21810 368 aa23.63■■□□□ 1.37
MSX2-201ENST00000239243 ALDH1A3P47895 512 aa23.63■■□□□ 1.37
MSX2-201ENST00000239243 SERPINB8P50452 374 aa23.63■■□□□ 1.37
MSX2-201ENST00000239243 SETDB1Q15047 1291 aa23.63■■□□□ 1.37
MSX2-201ENST00000239243 SPRED3Q2MJR0 410 aa23.63■■□□□ 1.37
MSX2-201ENST00000239243 C5orf22Q49AR2 442 aa23.63■■□□□ 1.37
MSX2-201ENST00000239243 SLC39A11Q8N1S5 342 aa23.63■■□□□ 1.37
MSX2-201ENST00000239243 TEX26Q8N6G2 289 aa23.63■■□□□ 1.37
MSX2-201ENST00000239243 PABPC5Q96DU9 382 aaKnown RBP23.63■■□□□ 1.37
MSX2-201ENST00000239243 MYRFLQ96LU7 910 aa23.63■■□□□ 1.37
MSX2-201ENST00000239243 RMDN2Q96LZ7 410 aa23.63■■□□□ 1.37
MSX2-201ENST00000239243 TRPM5Q9NZQ8 1165 aa23.63■■□□□ 1.37
MSX2-201ENST00000239243 ZNF840PA6NDX5 716 aa23.63■■□□□ 1.37
MSX2-201ENST00000239243 ACSL4O60488 711 aa23.63■■□□□ 1.37
MSX2-201ENST00000239243 PMPCBO75439 489 aa23.63■■□□□ 1.37
MSX2-201ENST00000239243 NMBRP28336 390 aa23.63■■□□□ 1.37
MSX2-201ENST00000239243 TYK2P29597 1187 aa23.63■■□□□ 1.37
MSX2-201ENST00000239243 HADHAP40939 763 aa23.63■■□□□ 1.37
MSX2-201ENST00000239243 NADSYN1Q6IA69 706 aa23.63■■□□□ 1.37
MSX2-201ENST00000239243 DENND5AQ6IQ26 1287 aa23.63■■□□□ 1.37
MSX2-201ENST00000239243 RANBP10Q6VN20 620 aa23.63■■□□□ 1.37
MSX2-201ENST00000239243 PLD4Q96BZ4 506 aa23.63■■□□□ 1.37
MSX2-201ENST00000239243 IMP4Q96G21 291 aaKnown RBP23.63■■□□□ 1.37
MSX2-201ENST00000239243 MRGPRX2Q96LB1 330 aa23.63■■□□□ 1.37
MSX2-201ENST00000239243 TRIM55Q9BYV6 548 aa23.63■■□□□ 1.37
MSX2-201ENST00000239243 NT5MQ9NPB1 228 aa23.63■■□□□ 1.37
MSX2-201ENST00000239243 SIRPGQ9P1W8 387 aa23.63■■□□□ 1.37
MSX2-201ENST00000239243 J3KR12 359 aa23.62■■□□□ 1.37
MSX2-201ENST00000239243 LAG3P18627 525 aa23.62■■□□□ 1.37
MSX2-201ENST00000239243 KCNQ1P51787 676 aa23.62■■□□□ 1.37
MSX2-201ENST00000239243 PDE1CQ14123 709 aaPredicted RBP23.62■■□□□ 1.37
MSX2-201ENST00000239243 VEPH1Q14D04 833 aa23.62■■□□□ 1.37
MSX2-201ENST00000239243 TAF12Q16514 161 aa23.62■■□□□ 1.37
MSX2-201ENST00000239243 GALNTL6Q49A17 601 aa23.62■■□□□ 1.37
MSX2-201ENST00000239243 NUDCD3Q8IVD9 361 aa23.62■■□□□ 1.37
MSX2-201ENST00000239243 PSMG2Q969U7 264 aa23.62■■□□□ 1.37
MSX2-201ENST00000239243 VWCEQ96DN2 955 aa23.62■■□□□ 1.37
MSX2-201ENST00000239243 PRKD2Q9BZL6 878 aa23.62■■□□□ 1.37
MSX2-201ENST00000239243 CYP4F11Q9HBI6 524 aa23.62■■□□□ 1.37
MSX2-201ENST00000239243 DNAJC8O75937 253 aaPredicted RBP23.61■■□□□ 1.37
MSX2-201ENST00000239243 SEC24AO95486 1093 aa23.61■■□□□ 1.37
MSX2-201ENST00000239243 PAMP19021 973 aa23.61■■□□□ 1.37
MSX2-201ENST00000239243 PPP3CCP48454 512 aa23.61■■□□□ 1.37
MSX2-201ENST00000239243 SERINC3Q13530 473 aa23.61■■□□□ 1.37
MSX2-201ENST00000239243 CMTR2Q8IYT2 770 aaKnown RBP23.61■■□□□ 1.37
MSX2-201ENST00000239243 FITM2Q8N6M3 262 aa23.61■■□□□ 1.37
MSX2-201ENST00000239243 ANKLE1Q8NAG6 615 aa23.61■■□□□ 1.37
MSX2-201ENST00000239243 C10orf82Q8WW14 230 aa23.61■■□□□ 1.37
MSX2-201ENST00000239243 AZIN2Q96A70 460 aa23.61■■□□□ 1.37
MSX2-201ENST00000239243 E2F7Q96AV8 911 aa23.61■■□□□ 1.37
MSX2-201ENST00000239243 TRMT2BQ96GJ1 504 aaKnown RBP23.61■■□□□ 1.37
MSX2-201ENST00000239243 ARNT2Q9HBZ2 717 aa23.61■■□□□ 1.37
MSX2-201ENST00000239243 TCAF1Q9Y4C2 921 aa23.61■■□□□ 1.37
MSX2-201ENST00000239243 UBOX5O94941 541 aa23.61■■□□□ 1.37
MSX2-201ENST00000239243 HMGA1P17096 107 aaKnown RBP23.61■■□□□ 1.37
MSX2-201ENST00000239243 MAGEA12P43365 314 aa23.61■■□□□ 1.37
MSX2-201ENST00000239243 WNT3AP56704 352 aa23.61■■□□□ 1.37
MSX2-201ENST00000239243 SLC10A7Q0GE19 358 aa23.61■■□□□ 1.37
MSX2-201ENST00000239243 POU6F1Q14863 301 aa23.61■■□□□ 1.37
MSX2-201ENST00000239243 RABGAP1LQ5R372 815 aa23.61■■□□□ 1.37
MSX2-201ENST00000239243 KDELC1Q6UW63 502 aa23.61■■□□□ 1.37
MSX2-201ENST00000239243 LGI2Q8N0V4 545 aa23.61■■□□□ 1.37
MSX2-201ENST00000239243 DIS3LQ8TF46 1054 aaKnown RBP23.61■■□□□ 1.37
MSX2-201ENST00000239243 AGAP2Q99490 1192 aa23.61■■□□□ 1.37
MSX2-201ENST00000239243 NPHS2Q9NP85 383 aa23.61■■□□□ 1.37
MSX2-201ENST00000239243 YIPF1Q9Y548 306 aa23.61■■□□□ 1.37
MSX2-201ENST00000239243 URODP06132 367 aa23.6■■□□□ 1.37
MSX2-201ENST00000239243 BPGMP07738 259 aa23.6■■□□□ 1.37
MSX2-201ENST00000239243 ITKQ08881 620 aa23.6■■□□□ 1.37
MSX2-201ENST00000239243 BTG3Q14201 252 aaPredicted RBP23.6■■□□□ 1.37
MSX2-201ENST00000239243 UGP2Q16851 508 aa23.6■■□□□ 1.37
MSX2-201ENST00000239243 FAM133BQ5BKY9 247 aaKnown RBP23.6■■□□□ 1.37
MSX2-201ENST00000239243 DCLK2Q8N568 766 aa23.6■■□□□ 1.37
MSX2-201ENST00000239243 IARS2Q9NSE4 1012 aaKnown RBP23.6■■□□□ 1.37
MSX2-201ENST00000239243 MPOP05164 745 aa23.6■■□□□ 1.37
MSX2-201ENST00000239243 TMPRSS15P98073 1019 aa23.6■■□□□ 1.37
MSX2-201ENST00000239243 FSTL4Q6MZW2 842 aa23.6■■□□□ 1.37
MSX2-201ENST00000239243 ZNF333Q96JL9 665 aa23.6■■□□□ 1.37
MSX2-201ENST00000239243 C7orf26Q96N11 449 aa23.6■■□□□ 1.37
MSX2-201ENST00000239243 ZNF599Q96NL3 588 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms